RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PATL2C9JE40 543 aaKnown RBP17.8■□□□□ 0.44
NFIX-208ENST00000587260 WDHD1O75717 1129 aaPredicted RBP17.8■□□□□ 0.44
NFIX-208ENST00000587260 TDO2P48775 406 aa17.8■□□□□ 0.44
NFIX-208ENST00000587260 HIRAP54198 1017 aaPredicted RBP17.8■□□□□ 0.44
NFIX-208ENST00000587260 ALX1Q15699 326 aa17.8■□□□□ 0.44
NFIX-208ENST00000587260 SLC4A8Q2Y0W8 1093 aa17.8■□□□□ 0.44
NFIX-208ENST00000587260 SPDYE2Q495Y8 402 aa17.8■□□□□ 0.44
NFIX-208ENST00000587260 DDX4Q9NQI0 724 aaKnown RBP17.8■□□□□ 0.44
NFIX-208ENST00000587260 SCAF8Q9UPN6 1271 aaKnown RBP17.8■□□□□ 0.44
NFIX-208ENST00000587260 ZMYM6O95789 1325 aa17.8■□□□□ 0.44
NFIX-208ENST00000587260 POTECB2RU33 542 aa17.79■□□□□ 0.44
NFIX-208ENST00000587260 TCP10L2B9ZVM9 353 aa17.79■□□□□ 0.44
NFIX-208ENST00000587260 TSGA10IPQ3SY00 556 aa17.79■□□□□ 0.44
NFIX-208ENST00000587260 TAF1DQ9H5J8 278 aaPredicted RBP17.79■□□□□ 0.44
NFIX-208ENST00000587260 TCP10Q12799 353 aa17.78■□□□□ 0.44
NFIX-208ENST00000587260 EAPPQ56P03 285 aaPredicted RBP17.78■□□□□ 0.44
NFIX-208ENST00000587260 ANGEL2Q5VTE6 544 aaKnown RBP17.78■□□□□ 0.44
NFIX-208ENST00000587260 RNF20Q5VTR2 975 aa17.78■□□□□ 0.44
NFIX-208ENST00000587260 IFNL3Q8IZI9 196 aa17.78■□□□□ 0.44
NFIX-208ENST00000587260 NAPBQ9H115 298 aa17.78■□□□□ 0.44
NFIX-208ENST00000587260 RRAGCQ9HB90 399 aa17.78■□□□□ 0.44
NFIX-208ENST00000587260 NMRK2Q9NPI5 230 aa17.78■□□□□ 0.44
NFIX-208ENST00000587260 DCP1AQ9NPI6 582 aaPredicted RBP17.78■□□□□ 0.44
NFIX-208ENST00000587260 GGA3Q9NZ52 723 aa17.78■□□□□ 0.44
NFIX-208ENST00000587260 SAP30BPQ9UHR5 308 aaKnown RBP17.78■□□□□ 0.44
NFIX-208ENST00000587260 CTNNA3Q9UI47 895 aa17.78■□□□□ 0.44
NFIX-208ENST00000587260 CREB3L3Q68CJ9 461 aa17.77■□□□□ 0.44
NFIX-208ENST00000587260 GIMAP6Q6P9H5 292 aa17.77■□□□□ 0.44
NFIX-208ENST00000587260 IL27Q8NEV9 243 aa17.77■□□□□ 0.44
NFIX-208ENST00000587260 DDRGK1Q96HY6 314 aa17.77■□□□□ 0.44
NFIX-208ENST00000587260 NACAP1Q9BZK3 213 aa17.77■□□□□ 0.44
NFIX-208ENST00000587260 ATP8A2Q9NTI2 1148 aa17.77■□□□□ 0.44
NFIX-208ENST00000587260 FAM198AQ9UFP1 575 aa17.77■□□□□ 0.44
NFIX-208ENST00000587260 PALD1Q9ULE6 856 aa17.77■□□□□ 0.44
NFIX-208ENST00000587260 SIPA1L1O43166 1804 aa17.77■□□□□ 0.44
NFIX-208ENST00000587260 POLR2AP24928 1970 aaKnown RBP17.77■□□□□ 0.43
NFIX-208ENST00000587260 SLC27A2O14975 620 aa17.77■□□□□ 0.43
NFIX-208ENST00000587260 FGAP02671 866 aa17.77■□□□□ 0.43
NFIX-208ENST00000587260 RASEFQ8IZ41 740 aa17.77■□□□□ 0.43
NFIX-208ENST00000587260 IDI2Q9BXS1 227 aa17.77■□□□□ 0.43
NFIX-208ENST00000587260 MCM9Q9NXL9 1143 aa17.77■□□□□ 0.43
NFIX-208ENST00000587260 ZKSCAN1P17029 563 aaPredicted RBP17.76■□□□□ 0.43
NFIX-208ENST00000587260 USP50Q70EL3 339 aaPredicted RBP17.76■□□□□ 0.43
NFIX-208ENST00000587260 ZFPM1Q8IX07 1006 aa17.76■□□□□ 0.43
NFIX-208ENST00000587260 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
NFIX-208ENST00000587260 SNX14Q9Y5W7 946 aa17.76■□□□□ 0.43
NFIX-208ENST00000587260 CNTNAP1P78357 1384 aa17.75■□□□□ 0.43
NFIX-208ENST00000587260 CYP2D7A0A087X1C5 515 aa17.75■□□□□ 0.43
NFIX-208ENST00000587260 CYP2D6P10635 497 aa17.75■□□□□ 0.43
NFIX-208ENST00000587260 HAND2P61296 217 aa17.75■□□□□ 0.43
NFIX-208ENST00000587260 EVX2Q03828 476 aa17.75■□□□□ 0.43
NFIX-208ENST00000587260 MKRN1Q9UHC7 482 aaKnown RBP17.75■□□□□ 0.43
NFIX-208ENST00000587260 MYH8P13535 1937 aa17.75■□□□□ 0.43
NFIX-208ENST00000587260 MINDY4BA8MYZ0 360 aa17.74■□□□□ 0.43
NFIX-208ENST00000587260 CYP21A2P08686 494 aa17.74■□□□□ 0.43
NFIX-208ENST00000587260 POTEIP0CG38 1075 aa17.74■□□□□ 0.43
NFIX-208ENST00000587260 POTEJP0CG39 1038 aa17.74■□□□□ 0.43
NFIX-208ENST00000587260 VEGFAP15692 232 aaPredicted RBP17.74■□□□□ 0.43
NFIX-208ENST00000587260 RABEP1Q15276 862 aa17.74■□□□□ 0.43
NFIX-208ENST00000587260 TM6SF1Q9BZW5 370 aa17.74■□□□□ 0.43
NFIX-208ENST00000587260 ARPP21Q9UBL0 812 aaPredicted RBP17.74■□□□□ 0.43
NFIX-208ENST00000587260 USP17L12C9JPN9 530 aa17.73■□□□□ 0.43
NFIX-208ENST00000587260 USP17L21D6R901 530 aa17.73■□□□□ 0.43
NFIX-208ENST00000587260 SMIM22K7EJ46 135 aa17.73■□□□□ 0.43
NFIX-208ENST00000587260 POLR3DP05423 398 aaPredicted RBP17.73■□□□□ 0.43
NFIX-208ENST00000587260 ANP32AP39687 249 aaKnown RBP17.73■□□□□ 0.43
NFIX-208ENST00000587260 IMMTQ16891 758 aaKnown RBP17.73■□□□□ 0.43
NFIX-208ENST00000587260 CTR9Q6PD62 1173 aa17.73■□□□□ 0.43
NFIX-208ENST00000587260 PNMA8AQ86V59 439 aaPredicted RBP17.73■□□□□ 0.43
NFIX-208ENST00000587260 APOBEC3FQ8IUX4 373 aaKnown RBP17.73■□□□□ 0.43
NFIX-208ENST00000587260 ZSCAN29Q8IWY8 852 aaPredicted RBP17.73■□□□□ 0.43
NFIX-208ENST00000587260 STK11IPQ8N1F8 1099 aa17.73■□□□□ 0.43
NFIX-208ENST00000587260 TMEM39BQ9GZU3 492 aa17.73■□□□□ 0.43
NFIX-208ENST00000587260 ENTPD3O75355 529 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 TNNI2P48788 182 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 TNFAIP1Q13829 316 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 KRT32Q14532 448 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 CLEC11AQ9Y240 323 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 COL2A1P02458 1487 aaPredicted RBP17.72■□□□□ 0.43
NFIX-208ENST00000587260 DDTLA6NHG4 134 aaPredicted RBP17.72■□□□□ 0.43
NFIX-208ENST00000587260 PPARAQ07869 468 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 RASA3Q14644 834 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 FKBP1CQ5VVH2 108 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 SH3BP5LQ7L8J4 393 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 AMOTL1Q8IY63 956 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 ZNF784Q8NCA9 323 aaPredicted RBP17.72■□□□□ 0.43
NFIX-208ENST00000587260 FAM151AQ8WW52 585 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 DCPSQ96C86 337 aaKnown RBP17.72■□□□□ 0.43
NFIX-208ENST00000587260 TAF6LQ9Y6J9 622 aa17.72■□□□□ 0.43
NFIX-208ENST00000587260 ADM5C9JUS6 153 aa17.71■□□□□ 0.43
NFIX-208ENST00000587260 ZNF213O14771 459 aa17.71■□□□□ 0.43
NFIX-208ENST00000587260 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
NFIX-208ENST00000587260 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
NFIX-208ENST00000587260 FAM83AQ86UY5 434 aa17.71■□□□□ 0.43
NFIX-208ENST00000587260 DEFB129Q9H1M3 183 aa17.71■□□□□ 0.43
NFIX-208ENST00000587260 GPBP1L1Q9HC44 474 aaPredicted RBP17.71■□□□□ 0.43
NFIX-208ENST00000587260 PITPNM2Q9BZ72 1349 aa17.71■□□□□ 0.43
NFIX-208ENST00000587260 HLA-DOAP06340 250 aa17.7■□□□□ 0.42
NFIX-208ENST00000587260 PSMA5P28066 241 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms