RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 IPO8O15397 1037 aaKnown RBP17.32■□□□□ 0.36
ATG4D-206ENST00000586863 ECM2O94769 699 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-206ENST00000586863 GNAI2P04899 355 aa17.32■□□□□ 0.36
ATG4D-206ENST00000586863 EN2P19622 333 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-206ENST00000586863 CTGFP29279 349 aa17.32■□□□□ 0.36
ATG4D-206ENST00000586863 BTDP43251 543 aa17.32■□□□□ 0.36
ATG4D-206ENST00000586863 C17orf99Q6UX52 265 aa17.32■□□□□ 0.36
ATG4D-206ENST00000586863 PI16Q6UXB8 463 aa17.32■□□□□ 0.36
ATG4D-206ENST00000586863 FAM163AQ96GL9 167 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-206ENST00000586863 NEUROD6Q96NK8 337 aa17.32■□□□□ 0.36
ATG4D-206ENST00000586863 DDTLA6NHG4 134 aaPredicted RBP17.31■□□□□ 0.36
ATG4D-206ENST00000586863 MECOMQ03112 1051 aa17.31■□□□□ 0.36
ATG4D-206ENST00000586863 PICALMQ13492 652 aa17.31■□□□□ 0.36
ATG4D-206ENST00000586863 SPTY2D1Q68D10 685 aaPredicted RBP17.31■□□□□ 0.36
ATG4D-206ENST00000586863 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
ATG4D-206ENST00000586863 MGAMO43451 1857 aa17.31■□□□□ 0.36
ATG4D-206ENST00000586863 RHBDL3P58872 404 aa17.3■□□□□ 0.36
ATG4D-206ENST00000586863 KIF22Q14807 665 aa17.3■□□□□ 0.36
ATG4D-206ENST00000586863 ERICH6Q7L0X2 663 aa17.3■□□□□ 0.36
ATG4D-206ENST00000586863 ZSCAN29Q8IWY8 852 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-206ENST00000586863 SLF2Q8IX21 1173 aa17.3■□□□□ 0.36
ATG4D-206ENST00000586863 SCYL3Q8IZE3 742 aa17.3■□□□□ 0.36
ATG4D-206ENST00000586863 TMEM57Q8N5G2 664 aa17.3■□□□□ 0.36
ATG4D-206ENST00000586863 SH3TC2Q8TF17 1288 aa17.3■□□□□ 0.36
ATG4D-206ENST00000586863 GPR75-ASB3A0A0A6YYF3 556 aa17.29■□□□□ 0.36
ATG4D-206ENST00000586863 MYCP01106 439 aaPredicted RBP17.29■□□□□ 0.36
ATG4D-206ENST00000586863 ARID4AP29374 1257 aaPredicted RBP17.29■□□□□ 0.36
ATG4D-206ENST00000586863 MAP3K10Q02779 954 aa17.29■□□□□ 0.36
ATG4D-206ENST00000586863 GPAT2Q6NUI2 795 aa17.29■□□□□ 0.36
ATG4D-206ENST00000586863 TBC1D9Q6ZT07 1266 aa17.29■□□□□ 0.36
ATG4D-206ENST00000586863 NBPF11Q86T75 865 aa17.29■□□□□ 0.36
ATG4D-206ENST00000586863 SPATA5Q8NB90 893 aa17.29■□□□□ 0.36
ATG4D-206ENST00000586863 TMEM106CQ9BVX2 250 aa17.29■□□□□ 0.36
ATG4D-206ENST00000586863 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
ATG4D-206ENST00000586863 ATAD5Q96QE3 1844 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 MAST2Q6P0Q8 1798 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 CXCL11O14625 94 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 CYP2C8P10632 490 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 PTPRAP18433 802 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 MCAMP43121 646 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 G3BP1Q13283 466 aaKnown RBP eCLIP17.28■□□□□ 0.36
ATG4D-206ENST00000586863 GORABQ5T7V8 394 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 NSUN4Q96CB9 384 aaKnown RBP17.28■□□□□ 0.36
ATG4D-206ENST00000586863 TRIM47Q96LD4 638 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 PARK7Q99497 189 aaKnown RBP17.28■□□□□ 0.36
ATG4D-206ENST00000586863 PICK1Q9NRD5 415 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.28■□□□□ 0.36
ATG4D-206ENST00000586863 ZHX2Q9Y6X8 837 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 DOCK3Q8IZD9 2030 aa17.28■□□□□ 0.36
ATG4D-206ENST00000586863 TRIOBPQ9H2D6 2365 aa17.27■□□□□ 0.36
ATG4D-206ENST00000586863 A0A0G2JLL6 359 aaPredicted RBP17.27■□□□□ 0.36
ATG4D-206ENST00000586863 GNRH1P01148 92 aa17.27■□□□□ 0.36
ATG4D-206ENST00000586863 PSMC4P43686 418 aa17.27■□□□□ 0.36
ATG4D-206ENST00000586863 ZKSCAN2Q63HK3 967 aa17.27■□□□□ 0.36
ATG4D-206ENST00000586863 PRRT2Q7Z6L0 340 aaPredicted RBP17.27■□□□□ 0.36
ATG4D-206ENST00000586863 AFG3L2Q9Y4W6 797 aa17.27■□□□□ 0.36
ATG4D-206ENST00000586863 CDK5RAP2Q96SN8 1893 aa17.27■□□□□ 0.35
ATG4D-206ENST00000586863 BCRP11274 1271 aa17.26■□□□□ 0.35
ATG4D-206ENST00000586863 SLC4A8Q2Y0W8 1093 aa17.26■□□□□ 0.35
ATG4D-206ENST00000586863 CCDC84Q86UT8 332 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-206ENST00000586863 RAI14Q9P0K7 980 aa17.26■□□□□ 0.35
ATG4D-206ENST00000586863 SRRDQ9UH36 339 aa17.26■□□□□ 0.35
ATG4D-206ENST00000586863 SIPA1L1O43166 1804 aa17.26■□□□□ 0.35
ATG4D-206ENST00000586863 FAM196BA6NMK8 535 aa17.25■□□□□ 0.35
ATG4D-206ENST00000586863 CTNND1O60716 968 aaKnown RBP17.25■□□□□ 0.35
ATG4D-206ENST00000586863 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
ATG4D-206ENST00000586863 OSBPP22059 807 aa17.25■□□□□ 0.35
ATG4D-206ENST00000586863 PRMT2P55345 433 aa17.25■□□□□ 0.35
ATG4D-206ENST00000586863 POLA2Q14181 598 aa17.25■□□□□ 0.35
ATG4D-206ENST00000586863 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
ATG4D-206ENST00000586863 COL2A1P02458 1487 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-206ENST00000586863 RANBP2P49792 3224 aaKnown RBP17.24■□□□□ 0.35
ATG4D-206ENST00000586863 TRIM75PA6NK02 468 aa17.24■□□□□ 0.35
ATG4D-206ENST00000586863 FMNL1O95466 1100 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-206ENST00000586863 GSTO1P78417 241 aa17.24■□□□□ 0.35
ATG4D-206ENST00000586863 GADL1Q6ZQY3 521 aa17.24■□□□□ 0.35
ATG4D-206ENST00000586863 FASTKD5Q7L8L6 764 aaKnown RBP17.24■□□□□ 0.35
ATG4D-206ENST00000586863 FOCADQ5VW36 1801 aa17.24■□□□□ 0.35
ATG4D-206ENST00000586863 MYPNQ86TC9 1320 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 LOC285556D6RIA3 1793 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 TBC1D12O60347 775 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 LDHCP07864 332 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 HNRNPUQ00839 825 aaKnown RBP eCLIP17.23■□□□□ 0.35
ATG4D-206ENST00000586863 MTFR1Q15390 333 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 TNNI3KQ59H18 835 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
ATG4D-206ENST00000586863 SSH3Q8TE77 659 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 DBNDD2Q9BQY9 259 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
ATG4D-206ENST00000586863 SNRKQ9NRH2 765 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 FPGT-TNNI3KV9GXZ4 949 aa17.23■□□□□ 0.35
ATG4D-206ENST00000586863 RLBP1P12271 317 aa17.22■□□□□ 0.35
ATG4D-206ENST00000586863 HOXD10P28358 340 aa17.22■□□□□ 0.35
ATG4D-206ENST00000586863 PRKCZQ05513 592 aa17.22■□□□□ 0.35
ATG4D-206ENST00000586863 TEX11Q8IYF3 940 aa17.22■□□□□ 0.35
ATG4D-206ENST00000586863 RAET1EQ8TD07 263 aa17.22■□□□□ 0.35
ATG4D-206ENST00000586863 SH3RF3Q8TEJ3 882 aaPredicted RBP17.22■□□□□ 0.35
ATG4D-206ENST00000586863 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATG4D-206ENST00000586863 GPR108Q9NPR9 543 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms