RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 GSTO1P78417 241 aa17.57■□□□□ 0.4
CDK5RAP3-236ENST00000584991 ME3Q16798 604 aa17.57■□□□□ 0.4
CDK5RAP3-236ENST00000584991 CCDC83Q8IWF9 413 aa17.57■□□□□ 0.4
CDK5RAP3-236ENST00000584991 IFNL3Q8IZI9 196 aa17.57■□□□□ 0.4
CDK5RAP3-236ENST00000584991 EPB41L4AQ9HCS5 686 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-236ENST00000584991 IMMTQ16891 758 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 CERS5Q8N5B7 392 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 MXD3Q9BW11 206 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 LDHCP07864 332 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 RPS6KB1P23443 525 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 COL9A3Q14050 684 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 ALX1Q15699 326 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 STOX1Q6ZVD7 989 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 SDR42E1Q8WUS8 393 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 NAPBQ9H115 298 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 GDPD2Q9HCC8 539 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 BCS1LQ9Y276 419 aa17.56■□□□□ 0.4
CDK5RAP3-236ENST00000584991 ZNF213O14771 459 aa17.55■□□□□ 0.4
CDK5RAP3-236ENST00000584991 KRT85P78386 507 aa17.55■□□□□ 0.4
CDK5RAP3-236ENST00000584991 LARP1BQ659C4 914 aaKnown RBP17.55■□□□□ 0.4
CDK5RAP3-236ENST00000584991 NEK1Q96PY6 1258 aa17.55■□□□□ 0.4
CDK5RAP3-236ENST00000584991 FER1L6Q2WGJ9 1857 aa17.55■□□□□ 0.4
CDK5RAP3-236ENST00000584991 ZNF646O15015 1829 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 E7EWF7 191 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 F8W031 263 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 LARGE1O95461 756 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 NACAP1Q9BZK3 213 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 SCAND2PQ9GZW5 306 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 SUGT1Q9Y2Z0 365 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 MROH7-TTC4A0A0A0MT08 1334 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 BAZ2AQ9UIF9 1905 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 MYH15Q9Y2K3 1946 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 TPM3P06753 285 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 TDO2P48775 406 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 STRIP1Q5VSL9 837 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 LARGE2Q8N3Y3 721 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 RNF214Q8ND24 703 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 TPCN1Q9ULQ1 816 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
CDK5RAP3-236ENST00000584991 USP17L3A6NCW0 530 aa17.53■□□□□ 0.4
CDK5RAP3-236ENST00000584991 USP17L4A6NCW7 530 aa17.53■□□□□ 0.4
CDK5RAP3-236ENST00000584991 USP17L1Q7RTZ2 530 aa17.53■□□□□ 0.4
CDK5RAP3-236ENST00000584991 CHMP4CQ96CF2 233 aa17.53■□□□□ 0.4
CDK5RAP3-236ENST00000584991 NOL10Q9BSC4 688 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-236ENST00000584991 FUCA2Q9BTY2 467 aa17.53■□□□□ 0.4
CDK5RAP3-236ENST00000584991 CRNKL1Q9BZJ0 848 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-236ENST00000584991 YDJCA8MPS7 323 aa17.52■□□□□ 0.4
CDK5RAP3-236ENST00000584991 BAG3O95817 575 aa17.52■□□□□ 0.4
CDK5RAP3-236ENST00000584991 DACT2Q5SW24 774 aa17.52■□□□□ 0.4
CDK5RAP3-236ENST00000584991 SLF2Q8IX21 1173 aa17.52■□□□□ 0.4
CDK5RAP3-236ENST00000584991 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
CDK5RAP3-236ENST00000584991 TTF2Q9UNY4 1162 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-236ENST00000584991 PTMAP06454 111 aaKnown RBP17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 HMGB1P09429 215 aaKnown RBP17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 PPP4CP60510 307 aa17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 DNM1Q05193 864 aaKnown RBP17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 ST3GAL1Q11201 340 aa17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 HSP90AA2PQ14568 343 aaPredicted RBP17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 FAM163AQ96GL9 167 aaPredicted RBP17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TCEANC2Q96MN5 208 aa17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 NBPF3Q9H094 633 aa17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TAOK3Q9H2K8 898 aa17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 COL4A5P29400 1685 aa17.52■□□□□ 0.39
CDK5RAP3-236ENST00000584991 PSME4Q14997 1843 aa17.51■□□□□ 0.39
CDK5RAP3-236ENST00000584991 FIBPO43427 364 aa17.51■□□□□ 0.39
CDK5RAP3-236ENST00000584991 IARSP41252 1262 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-236ENST00000584991 BTDP43251 543 aa17.51■□□□□ 0.39
CDK5RAP3-236ENST00000584991 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-236ENST00000584991 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-236ENST00000584991 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-236ENST00000584991 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
CDK5RAP3-236ENST00000584991 GAKO14976 1311 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 GPR75-ASB3A0A0A6YYF3 556 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 KDM4AO75164 1064 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 FKBP1AP62942 108 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TBC1D10CQ8IV04 446 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 LARP6Q9BRS8 491 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 CDK5RAP2Q96SN8 1893 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 NFKBIEO00221 500 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 CCDC192P0DO97 292 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 SCNN1DP51172 638 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 CTDSPL2Q05D32 466 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 ATP8A2Q9NTI2 1148 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 DAGLAQ9Y4D2 1042 aa17.5■□□□□ 0.39
CDK5RAP3-236ENST00000584991 VPS37CA5D8V6 355 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TOB2Q14106 344 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 GLIPR1L2Q4G1C9 344 aa17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 GIMAP6Q6P9H5 292 aa17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 KIAA0825Q8IV33 1275 aa17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 MAP7D2Q96T17 732 aa17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 LLPHQ9BRT6 129 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 DCP1AQ9NPI6 582 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 USP25Q9UHP3 1055 aa17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 ADAMTSL1Q8N6G6 1762 aa17.49■□□□□ 0.39
CDK5RAP3-236ENST00000584991 MINDY4BA8MYZ0 360 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 USP5P45974 858 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms