RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 SH3BP5LQ7L8J4 393 aa19.75■□□□□ 0.75
ERBB2-222ENST00000584908 SMC5Q8IY18 1101 aa19.75■□□□□ 0.75
ERBB2-222ENST00000584908 MAGEB6Q8N7X4 407 aa19.75■□□□□ 0.75
ERBB2-222ENST00000584908 SH3RF3Q8TEJ3 882 aaPredicted RBP19.75■□□□□ 0.75
ERBB2-222ENST00000584908 SLC10A4Q96EP9 437 aa19.75■□□□□ 0.75
ERBB2-222ENST00000584908 GPATCH3Q96I76 525 aa19.75■□□□□ 0.75
ERBB2-222ENST00000584908 BCL11AQ9H165 835 aa19.75■□□□□ 0.75
ERBB2-222ENST00000584908 RWDD1Q9H446 243 aaPredicted RBP19.75■□□□□ 0.75
ERBB2-222ENST00000584908 ZNF112Q9UJU3 913 aa19.75■□□□□ 0.75
ERBB2-222ENST00000584908 TTC41PQ6P2S7 1318 aa19.74■□□□□ 0.75
ERBB2-222ENST00000584908 SALL3Q9BXA9 1300 aa19.74■□□□□ 0.75
ERBB2-222ENST00000584908 DDTLA6NHG4 134 aaPredicted RBP19.74■□□□□ 0.75
ERBB2-222ENST00000584908 FOXN1O15353 648 aa19.74■□□□□ 0.75
ERBB2-222ENST00000584908 ZBTB48P10074 688 aaPredicted RBP19.74■□□□□ 0.75
ERBB2-222ENST00000584908 MAP3K9P80192 1104 aa19.74■□□□□ 0.75
ERBB2-222ENST00000584908 TEX11Q8IYF3 940 aa19.74■□□□□ 0.75
ERBB2-222ENST00000584908 EDC3Q96F86 508 aaKnown RBP19.74■□□□□ 0.75
ERBB2-222ENST00000584908 CSRNP1Q96S65 589 aa19.74■□□□□ 0.75
ERBB2-222ENST00000584908 ZNF341Q9BYN7 854 aa19.74■□□□□ 0.75
ERBB2-222ENST00000584908 TCRBV5S4A2TA0A5A2 114 aa19.73■□□□□ 0.75
ERBB2-222ENST00000584908 CA12O43570 354 aa19.73■□□□□ 0.75
ERBB2-222ENST00000584908 PDE6AP16499 860 aa19.73■□□□□ 0.75
ERBB2-222ENST00000584908 SLC9C2Q5TAH2 1124 aa19.73■□□□□ 0.75
ERBB2-222ENST00000584908 AIDAQ96BJ3 306 aa19.73■□□□□ 0.75
ERBB2-222ENST00000584908 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
ERBB2-222ENST00000584908 SIPA1L1O43166 1804 aa19.72■□□□□ 0.75
ERBB2-222ENST00000584908 PICALMQ13492 652 aa19.72■□□□□ 0.75
ERBB2-222ENST00000584908 VGLL4Q14135 290 aa19.72■□□□□ 0.75
ERBB2-222ENST00000584908 MIGA2Q7L4E1 593 aa19.72■□□□□ 0.75
ERBB2-222ENST00000584908 WNK4Q96J92 1243 aa19.72■□□□□ 0.75
ERBB2-222ENST00000584908 BEGAINQ9BUH8 593 aa19.72■□□□□ 0.75
ERBB2-222ENST00000584908 MYH1P12882 1939 aa19.71■□□□□ 0.75
ERBB2-222ENST00000584908 TBC1D12O60347 775 aa19.71■□□□□ 0.75
ERBB2-222ENST00000584908 IGHDP01880 384 aa19.71■□□□□ 0.75
ERBB2-222ENST00000584908 TM4SF4P48230 202 aa19.71■□□□□ 0.75
ERBB2-222ENST00000584908 CTCFP49711 727 aaPredicted RBP19.71■□□□□ 0.75
ERBB2-222ENST00000584908 DYNLL1P63167 89 aaKnown RBP19.71■□□□□ 0.75
ERBB2-222ENST00000584908 ANKRD45Q5TZF3 282 aa19.71■□□□□ 0.75
ERBB2-222ENST00000584908 WRNIP1Q96S55 665 aa19.71■□□□□ 0.75
ERBB2-222ENST00000584908 RIOK1Q9BRS2 568 aaKnown RBP19.71■□□□□ 0.75
ERBB2-222ENST00000584908 CSADQ9Y600 493 aa19.71■□□□□ 0.75
ERBB2-222ENST00000584908 DDX60LQ5H9U9 1706 aaKnown RBP19.7■□□□□ 0.74
ERBB2-222ENST00000584908 PHF20L1A8MW92 1017 aa19.7■□□□□ 0.74
ERBB2-222ENST00000584908 ADD2P35612 726 aa19.7■□□□□ 0.74
ERBB2-222ENST00000584908 GJA5P36382 358 aa19.7■□□□□ 0.74
ERBB2-222ENST00000584908 MIGA1Q8NAN2 632 aa19.7■□□□□ 0.74
ERBB2-222ENST00000584908 PI4K2BQ8TCG2 481 aa19.7■□□□□ 0.74
ERBB2-222ENST00000584908 OTUD7AQ8TE49 926 aaPredicted RBP19.7■□□□□ 0.74
ERBB2-222ENST00000584908 DHX36Q9H2U1 1008 aaKnown RBP19.7■□□□□ 0.74
ERBB2-222ENST00000584908 SAGE1Q9NXZ1 904 aa19.7■□□□□ 0.74
ERBB2-222ENST00000584908 SNCAIPQ9Y6H5 919 aa19.7■□□□□ 0.74
ERBB2-222ENST00000584908 FLT1P17948 1338 aa19.7■□□□□ 0.74
ERBB2-222ENST00000584908 ZNF532Q9HCE3 1301 aa19.7■□□□□ 0.74
ERBB2-222ENST00000584908 MX1P20591 662 aa19.69■□□□□ 0.74
ERBB2-222ENST00000584908 NOL9Q5SY16 702 aaKnown RBP19.69■□□□□ 0.74
ERBB2-222ENST00000584908 ZSCAN29Q8IWY8 852 aaPredicted RBP19.69■□□□□ 0.74
ERBB2-222ENST00000584908 TGFBRAP1Q8WUH2 860 aa19.69■□□□□ 0.74
ERBB2-222ENST00000584908 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.69■□□□□ 0.74
ERBB2-222ENST00000584908 ELP3Q9H9T3 547 aa19.69■□□□□ 0.74
ERBB2-222ENST00000584908 MANSC4A6NHS7 340 aaPredicted RBP19.68■□□□□ 0.74
ERBB2-222ENST00000584908 SPDYE5A6NIY4 337 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 ERC2O15083 957 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 GLRX3O76003 335 aaKnown RBP19.68■□□□□ 0.74
ERBB2-222ENST00000584908 HSPA8P11142 646 aaKnown RBP19.68■□□□□ 0.74
ERBB2-222ENST00000584908 INPP5BP32019 993 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 INHBEP58166 350 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 SREBF2Q12772 1141 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 UBE3CQ15386 1083 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 TSHZ3Q63HK5 1081 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 METTL16Q86W50 562 aaKnown RBP19.68■□□□□ 0.74
ERBB2-222ENST00000584908 ZKSCAN4Q969J2 545 aaPredicted RBP19.68■□□□□ 0.74
ERBB2-222ENST00000584908 OPTNQ96CV9 577 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 ZBTB47Q9UFB7 747 aaPredicted RBP19.68■□□□□ 0.74
ERBB2-222ENST00000584908 STAP2Q9UGK3 403 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 DOCK1Q14185 1865 aa19.68■□□□□ 0.74
ERBB2-222ENST00000584908 ZSCAN25Q6NSZ9 544 aa19.67■□□□□ 0.74
ERBB2-222ENST00000584908 ERO1BQ86YB8 467 aa19.67■□□□□ 0.74
ERBB2-222ENST00000584908 KBTBD3Q8NAB2 608 aa19.67■□□□□ 0.74
ERBB2-222ENST00000584908 PRDM10Q9NQV6 1147 aa19.67■□□□□ 0.74
ERBB2-222ENST00000584908 NAV1Q8NEY1 1877 aa19.66■□□□□ 0.74
ERBB2-222ENST00000584908 MAGEB6P1A0A0J9YX57 407 aa19.66■□□□□ 0.74
ERBB2-222ENST00000584908 TESPA1A2RU30 521 aaPredicted RBP19.66■□□□□ 0.74
ERBB2-222ENST00000584908 IRX6P78412 446 aaPredicted RBP19.66■□□□□ 0.74
ERBB2-222ENST00000584908 MKRN3Q13064 507 aaKnown RBP19.66■□□□□ 0.74
ERBB2-222ENST00000584908 MAPKAPK5Q8IW41 473 aa19.66■□□□□ 0.74
ERBB2-222ENST00000584908 RNF186Q9NXI6 227 aa19.66■□□□□ 0.74
ERBB2-222ENST00000584908 PI4KBQ9UBF8 816 aa19.66■□□□□ 0.74
ERBB2-222ENST00000584908 HERC5Q9UII4 1024 aaKnown RBP19.66■□□□□ 0.74
ERBB2-222ENST00000584908 PHIPQ8WWQ0 1821 aa19.66■□□□□ 0.74
ERBB2-222ENST00000584908 ATAD5Q96QE3 1844 aa19.65■□□□□ 0.74
ERBB2-222ENST00000584908 NUCB1Q02818 461 aa19.65■□□□□ 0.74
ERBB2-222ENST00000584908 PPATQ06203 517 aa19.65■□□□□ 0.74
ERBB2-222ENST00000584908 CNKSR2Q8WXI2 1034 aa19.65■□□□□ 0.74
ERBB2-222ENST00000584908 MS4A4AQ96JQ5 239 aa19.65■□□□□ 0.74
ERBB2-222ENST00000584908 CTNND1O60716 968 aaKnown RBP19.64■□□□□ 0.73
ERBB2-222ENST00000584908 PDE1AP54750 535 aa19.64■□□□□ 0.73
ERBB2-222ENST00000584908 PPIL2Q13356 520 aa19.64■□□□□ 0.73
ERBB2-222ENST00000584908 CFHR5Q9BXR6 569 aa19.64■□□□□ 0.73
ERBB2-222ENST00000584908 SLURP2P0DP57 97 aa19.63■□□□□ 0.73
ERBB2-222ENST00000584908 USP5P45974 858 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms