RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 VGLL4Q14135 290 aa17.01■□□□□ 0.31
GGA3-215ENST00000582821 SH3BP5LQ7L8J4 393 aa17.01■□□□□ 0.31
GGA3-215ENST00000582821 ADGRA1Q86SQ6 560 aa17.01■□□□□ 0.31
GGA3-215ENST00000582821 NOL10Q9BSC4 688 aaKnown RBP17.01■□□□□ 0.31
GGA3-215ENST00000582821 CSADQ9Y600 493 aa17.01■□□□□ 0.31
GGA3-215ENST00000582821 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
GGA3-215ENST00000582821 ATRNL1Q5VV63 1379 aa17.01■□□□□ 0.31
GGA3-215ENST00000582821 CASP8AP2Q9UKL3 1982 aa17■□□□□ 0.31
GGA3-215ENST00000582821 DDTLA6NHG4 134 aaPredicted RBP17■□□□□ 0.31
GGA3-215ENST00000582821 SMARCA5O60264 1052 aaPredicted RBP17■□□□□ 0.31
GGA3-215ENST00000582821 TRPA1O75762 1119 aa17■□□□□ 0.31
GGA3-215ENST00000582821 IDH1O75874 414 aaKnown RBP17■□□□□ 0.31
GGA3-215ENST00000582821 GJA5P36382 358 aa17■□□□□ 0.31
GGA3-215ENST00000582821 MKRN3Q13064 507 aaKnown RBP17■□□□□ 0.31
GGA3-215ENST00000582821 CERS3Q8IU89 383 aa17■□□□□ 0.31
GGA3-215ENST00000582821 WRNIP1Q96S55 665 aa17■□□□□ 0.31
GGA3-215ENST00000582821 AATFQ9NY61 560 aaKnown RBP eCLIP17■□□□□ 0.31
GGA3-215ENST00000582821 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
GGA3-215ENST00000582821 TESPA1A2RU30 521 aaPredicted RBP16.99■□□□□ 0.31
GGA3-215ENST00000582821 TBC1D12O60347 775 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 CYP7A1P22680 504 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 ERO1BQ86YB8 467 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
GGA3-215ENST00000582821 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 HAUS7Q99871 368 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 CFHR5Q9BXR6 569 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 ELP3Q9H9T3 547 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 SNCAIPQ9Y6H5 919 aa16.99■□□□□ 0.31
GGA3-215ENST00000582821 SPDYE5A6NIY4 337 aa16.98■□□□□ 0.31
GGA3-215ENST00000582821 PHF20L1A8MW92 1017 aa16.98■□□□□ 0.31
GGA3-215ENST00000582821 PICALMQ13492 652 aa16.98■□□□□ 0.31
GGA3-215ENST00000582821 HDAC1Q13547 482 aaPredicted RBP16.98■□□□□ 0.31
GGA3-215ENST00000582821 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
GGA3-215ENST00000582821 MAGEB6Q8N7X4 407 aa16.98■□□□□ 0.31
GGA3-215ENST00000582821 ZKSCAN4Q969J2 545 aaPredicted RBP16.98■□□□□ 0.31
GGA3-215ENST00000582821 MS4A4AQ96JQ5 239 aa16.98■□□□□ 0.31
GGA3-215ENST00000582821 OSBPL5Q9H0X9 879 aaPredicted RBP16.98■□□□□ 0.31
GGA3-215ENST00000582821 CDK5RAP2Q96SN8 1893 aa16.98■□□□□ 0.31
GGA3-215ENST00000582821 ALDH1A1P00352 501 aa16.97■□□□□ 0.31
GGA3-215ENST00000582821 INPP5BP32019 993 aa16.97■□□□□ 0.31
GGA3-215ENST00000582821 NOL9Q5SY16 702 aaKnown RBP16.97■□□□□ 0.31
GGA3-215ENST00000582821 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
GGA3-215ENST00000582821 BOLA2Q9H3K6 86 aa16.97■□□□□ 0.31
GGA3-215ENST00000582821 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
GGA3-215ENST00000582821 FOCADQ5VW36 1801 aa16.97■□□□□ 0.31
GGA3-215ENST00000582821 GOLIM4O00461 696 aa16.96■□□□□ 0.31
GGA3-215ENST00000582821 GTF2A2P52657 109 aa16.96■□□□□ 0.31
GGA3-215ENST00000582821 PPATQ06203 517 aa16.96■□□□□ 0.31
GGA3-215ENST00000582821 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
GGA3-215ENST00000582821 IFNL1Q8IU54 200 aa16.96■□□□□ 0.31
GGA3-215ENST00000582821 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.31
GGA3-215ENST00000582821 DNAJC2Q99543 621 aaKnown RBP16.96■□□□□ 0.31
GGA3-215ENST00000582821 BCL11AQ9H165 835 aa16.96■□□□□ 0.31
GGA3-215ENST00000582821 ECHDC1Q9NTX5 307 aa16.96■□□□□ 0.31
GGA3-215ENST00000582821 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.31
GGA3-215ENST00000582821 PDE6AP16499 860 aa16.95■□□□□ 0.3
GGA3-215ENST00000582821 DYNLL1P63167 89 aaKnown RBP16.95■□□□□ 0.3
GGA3-215ENST00000582821 PPIL2Q13356 520 aa16.95■□□□□ 0.3
GGA3-215ENST00000582821 SLC9C2Q5TAH2 1124 aa16.95■□□□□ 0.3
GGA3-215ENST00000582821 TNS4Q8IZW8 715 aa16.95■□□□□ 0.3
GGA3-215ENST00000582821 TGFBRAP1Q8WUH2 860 aa16.95■□□□□ 0.3
GGA3-215ENST00000582821 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
GGA3-215ENST00000582821 SUPT16HQ9Y5B9 1047 aaKnown RBP16.95■□□□□ 0.3
GGA3-215ENST00000582821 CTNND1O60716 968 aaKnown RBP16.94■□□□□ 0.3
GGA3-215ENST00000582821 OTUD7BQ6GQQ9 843 aa16.94■□□□□ 0.3
GGA3-215ENST00000582821 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
GGA3-215ENST00000582821 FOXP4Q8IVH2 680 aaPredicted RBP16.94■□□□□ 0.3
GGA3-215ENST00000582821 EDC3Q96F86 508 aaKnown RBP16.94■□□□□ 0.3
GGA3-215ENST00000582821 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
GGA3-215ENST00000582821 PTPN18Q99952 460 aa16.94■□□□□ 0.3
GGA3-215ENST00000582821 RIOK1Q9BRS2 568 aaKnown RBP16.94■□□□□ 0.3
GGA3-215ENST00000582821 PI4KBQ9UBF8 816 aa16.94■□□□□ 0.3
GGA3-215ENST00000582821 FLT1P17948 1338 aa16.94■□□□□ 0.3
GGA3-215ENST00000582821 TCRBV5S4A2TA0A5A2 114 aa16.93■□□□□ 0.3
GGA3-215ENST00000582821 IGF2BP3O00425 579 aaKnown RBP eCLIP16.93■□□□□ 0.3
GGA3-215ENST00000582821 IRF6O14896 467 aa16.93■□□□□ 0.3
GGA3-215ENST00000582821 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
GGA3-215ENST00000582821 MIGA1Q8NAN2 632 aa16.93■□□□□ 0.3
GGA3-215ENST00000582821 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
GGA3-215ENST00000582821 HERC5Q9UII4 1024 aaKnown RBP16.93■□□□□ 0.3
GGA3-215ENST00000582821 KCNH4Q9UQ05 1017 aa16.93■□□□□ 0.3
GGA3-215ENST00000582821 ZNF532Q9HCE3 1301 aa16.93■□□□□ 0.3
GGA3-215ENST00000582821 MYH1P12882 1939 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 MYH7P12883 1935 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 TBC1D8O95759 1140 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 CETPP11597 493 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 SNAPC2Q13487 334 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 UBE3CQ15386 1083 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 MAPKAPK5Q8IW41 473 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 EXOC6Q8TAG9 804 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 BRI3BPQ8WY22 251 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.33e-7■■■■□ 19.5
GGA3-215ENST00000582821 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.3
GGA3-215ENST00000582821 TTC41PQ6P2S7 1318 aa16.92■□□□□ 0.3
GGA3-215ENST00000582821 CCL15-CCL14A0A0B4J2E2 113 aa16.91■□□□□ 0.3
GGA3-215ENST00000582821 SLURP2P0DP57 97 aa16.91■□□□□ 0.3
GGA3-215ENST00000582821 ADD2P35612 726 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms