RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SIPA1L1O43166 1804 aa11.39□□□□□ -0.59
RFFL-210ENST00000582308 FLT1P17948 1338 aa11.39□□□□□ -0.59
RFFL-210ENST00000582308 TCP10L2B9ZVM9 353 aa11.39□□□□□ -0.59
RFFL-210ENST00000582308 VEGFAP15692 232 aaPredicted RBP11.39□□□□□ -0.59
RFFL-210ENST00000582308 TCP10Q12799 353 aa11.39□□□□□ -0.59
RFFL-210ENST00000582308 PICALMQ13492 652 aa11.39□□□□□ -0.59
RFFL-210ENST00000582308 ZNF526Q8TF50 670 aaPredicted RBP11.39□□□□□ -0.59
RFFL-210ENST00000582308 VEZTQ9HBM0 779 aa11.39□□□□□ -0.59
RFFL-210ENST00000582308 NMRK2Q9NPI5 230 aa11.39□□□□□ -0.59
RFFL-210ENST00000582308 TMOD2Q9NZR1 351 aa11.39□□□□□ -0.59
RFFL-210ENST00000582308 SAP30BPQ9UHR5 308 aaKnown RBP11.39□□□□□ -0.59
RFFL-210ENST00000582308 SCAF8Q9UPN6 1271 aaKnown RBP11.39□□□□□ -0.59
RFFL-210ENST00000582308 RBM8AQ9Y5S9 174 aaKnown RBP11.39□□□□□ -0.59
RFFL-210ENST00000582308 MYH8P13535 1937 aa11.39□□□□□ -0.59
RFFL-210ENST00000582308 ZMYM6O95789 1325 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 CYP2D7A0A087X1C5 515 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 USP17L12C9JPN9 530 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 USP17L21D6R901 530 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 SMIM22K7EJ46 135 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 EPB41L2O43491 1005 aaKnown RBP11.38□□□□□ -0.59
RFFL-210ENST00000582308 EIF5BO60841 1220 aaKnown RBP11.38□□□□□ -0.59
RFFL-210ENST00000582308 ENTPD3O75355 529 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 CYP2D6P10635 497 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 TDO2P48775 406 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 EVX2Q03828 476 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 NECTIN1Q15223 517 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 ANGEL2Q5VTE6 544 aaKnown RBP11.38□□□□□ -0.59
RFFL-210ENST00000582308 CTR9Q6PD62 1173 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 SH3BP5LQ7L8J4 393 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 NACAP1Q9BZK3 213 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 OSBPL5Q9H0X9 879 aaPredicted RBP11.38□□□□□ -0.59
RFFL-210ENST00000582308 NAPBQ9H115 298 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 GGA3Q9NZ52 723 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 PGAP2Q9UHJ9 254 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 PALD1Q9ULE6 856 aa11.38□□□□□ -0.59
RFFL-210ENST00000582308 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
RFFL-210ENST00000582308 POTEIP0CG38 1075 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 RASA3Q14644 834 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 SBK1Q52WX2 424 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 EAPPQ56P03 285 aaPredicted RBP11.37□□□□□ -0.59
RFFL-210ENST00000582308 FAM83AQ86UY5 434 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 PNMA8AQ86V59 439 aaPredicted RBP11.37□□□□□ -0.59
RFFL-210ENST00000582308 ZC3H15Q8WU90 426 aaKnown RBP11.37□□□□□ -0.59
RFFL-210ENST00000582308 FAM151AQ8WW52 585 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 TAF6LQ9Y6J9 622 aa11.37□□□□□ -0.59
RFFL-210ENST00000582308 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 DDTLA6NHG4 134 aaPredicted RBP11.36□□□□□ -0.59
RFFL-210ENST00000582308 MINDY4BA8MYZ0 360 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 SLC27A2O14975 620 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 HSPA4P34932 840 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 PLCD1P51178 756 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 HAND2P61296 217 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 SLC4A8Q2Y0W8 1093 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 C12orf60Q5U649 245 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 CREB3L3Q68CJ9 461 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 APOBEC3FQ8IUX4 373 aaKnown RBP11.36□□□□□ -0.59
RFFL-210ENST00000582308 CDAN1Q8IWY9 1227 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 KCNB2Q92953 911 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 TMEM39BQ9GZU3 492 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 DEFB129Q9H1M3 183 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 ATRNL1Q5VV63 1379 aa11.36□□□□□ -0.59
RFFL-210ENST00000582308 COL2A1P02458 1487 aaPredicted RBP11.36□□□□□ -0.59
RFFL-210ENST00000582308 POLR3DP05423 398 aaPredicted RBP11.35□□□□□ -0.59
RFFL-210ENST00000582308 CYP21A2P08686 494 aa11.35□□□□□ -0.59
RFFL-210ENST00000582308 TNNI2P48788 182 aa11.35□□□□□ -0.59
RFFL-210ENST00000582308 CTDSPL2Q05D32 466 aa11.35□□□□□ -0.59
RFFL-210ENST00000582308 PPARAQ07869 468 aa11.35□□□□□ -0.59
RFFL-210ENST00000582308 TNFAIP1Q13829 316 aa11.35□□□□□ -0.59
RFFL-210ENST00000582308 ZSCAN29Q8IWY8 852 aaPredicted RBP11.35□□□□□ -0.59
RFFL-210ENST00000582308 RASEFQ8IZ41 740 aa11.35□□□□□ -0.59
RFFL-210ENST00000582308 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
RFFL-210ENST00000582308 TEPSINQ96N21 525 aa11.35□□□□□ -0.59
RFFL-210ENST00000582308 ARPP21Q9UBL0 812 aaPredicted RBP11.35□□□□□ -0.59
RFFL-210ENST00000582308 ANAPC4Q9UJX5 808 aa11.35□□□□□ -0.59
RFFL-210ENST00000582308 TACC3Q9Y6A5 838 aa11.35□□□□□ -0.59
RFFL-210ENST00000582308 ZNF213O14771 459 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 SLURP2P0DP57 97 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 IMMTQ16891 758 aaKnown RBP11.34□□□□□ -0.59
RFFL-210ENST00000582308 PRAMEF18Q5VWM3 479 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 DLK2Q6UY11 383 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 KRT26Q7Z3Y9 468 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 TTC6Q86TZ1 520 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 TBC1D10CQ8IV04 446 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 DYNLL2Q96FJ2 89 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 TBC1D32Q96NH3 1257 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 C22orf23Q9BZE7 217 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 DHX36Q9H2U1 1008 aaKnown RBP11.34□□□□□ -0.59
RFFL-210ENST00000582308 INCENPQ9NQS7 918 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 SNX14Q9Y5W7 946 aa11.34□□□□□ -0.59
RFFL-210ENST00000582308 ROBO3Q96MS0 1386 aa11.33□□□□□ -0.6
RFFL-210ENST00000582308 ADM5C9JUS6 153 aa11.33□□□□□ -0.6
RFFL-210ENST00000582308 MCCP23508 829 aa11.33□□□□□ -0.6
RFFL-210ENST00000582308 RBM25P49756 843 aaKnown RBP11.33□□□□□ -0.6
RFFL-210ENST00000582308 GABPAQ06546 454 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms