RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
CCDC57-214ENST00000582040 TMEM106CQ9BVX2 250 aa17.79■□□□□ 0.44
CCDC57-214ENST00000582040 DDX4Q9NQI0 724 aaKnown RBP17.79■□□□□ 0.44
CCDC57-214ENST00000582040 MYCP01106 439 aaPredicted RBP17.78■□□□□ 0.44
CCDC57-214ENST00000582040 GNAI2P04899 355 aa17.78■□□□□ 0.44
CCDC57-214ENST00000582040 PI16Q6UXB8 463 aa17.78■□□□□ 0.44
CCDC57-214ENST00000582040 NBPF11Q86T75 865 aa17.78■□□□□ 0.44
CCDC57-214ENST00000582040 SCYL3Q8IZE3 742 aa17.78■□□□□ 0.44
CCDC57-214ENST00000582040 SH3TC2Q8TF17 1288 aa17.78■□□□□ 0.44
CCDC57-214ENST00000582040 PNMA6EA0A0J9YXQ4 647 aa17.77■□□□□ 0.44
CCDC57-214ENST00000582040 DDTLA6NHG4 134 aaPredicted RBP17.77■□□□□ 0.44
CCDC57-214ENST00000582040 PHF20L1A8MW92 1017 aa17.77■□□□□ 0.44
CCDC57-214ENST00000582040 SLURP2P0DP57 97 aa17.77■□□□□ 0.44
CCDC57-214ENST00000582040 CTGFP29279 349 aa17.77■□□□□ 0.44
CCDC57-214ENST00000582040 MECOMQ03112 1051 aa17.77■□□□□ 0.44
CCDC57-214ENST00000582040 GORABQ5T7V8 394 aa17.77■□□□□ 0.44
CCDC57-214ENST00000582040 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
CCDC57-214ENST00000582040 ZNF384Q8TF68 577 aa17.77■□□□□ 0.44
CCDC57-214ENST00000582040 FAM163AQ96GL9 167 aaPredicted RBP17.77■□□□□ 0.44
CCDC57-214ENST00000582040 HMG20BQ9P0W2 317 aa17.77■□□□□ 0.44
CCDC57-214ENST00000582040 PTPRFP10586 1907 aa17.76■□□□□ 0.43
CCDC57-214ENST00000582040 MAST2Q6P0Q8 1798 aa17.76■□□□□ 0.43
CCDC57-214ENST00000582040 CXCL11O14625 94 aa17.76■□□□□ 0.43
CCDC57-214ENST00000582040 GNRH1P01148 92 aa17.76■□□□□ 0.43
CCDC57-214ENST00000582040 RHBDL3P58872 404 aa17.76■□□□□ 0.43
CCDC57-214ENST00000582040 SLC4A8Q2Y0W8 1093 aa17.76■□□□□ 0.43
CCDC57-214ENST00000582040 TRIM47Q96LD4 638 aa17.76■□□□□ 0.43
CCDC57-214ENST00000582040 PARK7Q99497 189 aaKnown RBP17.76■□□□□ 0.43
CCDC57-214ENST00000582040 PICK1Q9NRD5 415 aa17.76■□□□□ 0.43
CCDC57-214ENST00000582040 ZHX2Q9Y6X8 837 aa17.76■□□□□ 0.43
CCDC57-214ENST00000582040 GPR75-ASB3A0A0A6YYF3 556 aa17.75■□□□□ 0.43
CCDC57-214ENST00000582040 PTPRAP18433 802 aa17.75■□□□□ 0.43
CCDC57-214ENST00000582040 ARID4AP29374 1257 aaPredicted RBP17.75■□□□□ 0.43
CCDC57-214ENST00000582040 PSMC4P43686 418 aa17.75■□□□□ 0.43
CCDC57-214ENST00000582040 PRMT2P55345 433 aa17.75■□□□□ 0.43
CCDC57-214ENST00000582040 GPAT2Q6NUI2 795 aa17.75■□□□□ 0.43
CCDC57-214ENST00000582040 SPATA5Q8NB90 893 aa17.75■□□□□ 0.43
CCDC57-214ENST00000582040 PHIPQ8WWQ0 1821 aa17.75■□□□□ 0.43
CCDC57-214ENST00000582040 MKI67P46013 3256 aaKnown RBP17.74■□□□□ 0.43
CCDC57-214ENST00000582040 A0A0G2JLL6 359 aaPredicted RBP17.74■□□□□ 0.43
CCDC57-214ENST00000582040 CYP2C8P10632 490 aa17.74■□□□□ 0.43
CCDC57-214ENST00000582040 MAP3K10Q02779 954 aa17.74■□□□□ 0.43
CCDC57-214ENST00000582040 G3BP1Q13283 466 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC57-214ENST00000582040 GADL1Q6ZQY3 521 aa17.74■□□□□ 0.43
CCDC57-214ENST00000582040 TBC1D9Q6ZT07 1266 aa17.74■□□□□ 0.43
CCDC57-214ENST00000582040 PRRT2Q7Z6L0 340 aaPredicted RBP17.74■□□□□ 0.43
CCDC57-214ENST00000582040 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
CCDC57-214ENST00000582040 NSUN4Q96CB9 384 aaKnown RBP17.74■□□□□ 0.43
CCDC57-214ENST00000582040 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.74■□□□□ 0.43
CCDC57-214ENST00000582040 SRRDQ9UH36 339 aa17.74■□□□□ 0.43
CCDC57-214ENST00000582040 BRCA2P51587 3418 aa17.74■□□□□ 0.43
CCDC57-214ENST00000582040 FMNL1O95466 1100 aaPredicted RBP17.73■□□□□ 0.43
CCDC57-214ENST00000582040 BCRP11274 1271 aa17.73■□□□□ 0.43
CCDC57-214ENST00000582040 OSBPP22059 807 aa17.73■□□□□ 0.43
CCDC57-214ENST00000582040 MCAMP43121 646 aa17.73■□□□□ 0.43
CCDC57-214ENST00000582040 GSTO1P78417 241 aa17.73■□□□□ 0.43
CCDC57-214ENST00000582040 ZKSCAN2Q63HK3 967 aa17.73■□□□□ 0.43
CCDC57-214ENST00000582040 CCDC84Q86UT8 332 aaPredicted RBP17.73■□□□□ 0.43
CCDC57-214ENST00000582040 RAI14Q9P0K7 980 aa17.73■□□□□ 0.43
CCDC57-214ENST00000582040 COL2A1P02458 1487 aaPredicted RBP17.73■□□□□ 0.43
CCDC57-214ENST00000582040 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
CCDC57-214ENST00000582040 FAM196BA6NMK8 535 aa17.72■□□□□ 0.43
CCDC57-214ENST00000582040 LDHCP07864 332 aa17.72■□□□□ 0.43
CCDC57-214ENST00000582040 FASTKD5Q7L8L6 764 aaKnown RBP17.72■□□□□ 0.43
CCDC57-214ENST00000582040 GCC1Q96CN9 775 aa17.72■□□□□ 0.43
CCDC57-214ENST00000582040 AFG3L2Q9Y4W6 797 aa17.72■□□□□ 0.43
CCDC57-214ENST00000582040 MGAMO43451 1857 aa17.71■□□□□ 0.43
CCDC57-214ENST00000582040 ATAD5Q96QE3 1844 aa17.71■□□□□ 0.43
CCDC57-214ENST00000582040 CTNND1O60716 968 aaKnown RBP17.71■□□□□ 0.43
CCDC57-214ENST00000582040 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
CCDC57-214ENST00000582040 UQCRFS1P1P0C7P4 283 aa17.71■□□□□ 0.43
CCDC57-214ENST00000582040 HOXD10P28358 340 aa17.71■□□□□ 0.43
CCDC57-214ENST00000582040 RAET1EQ8TD07 263 aa17.71■□□□□ 0.43
CCDC57-214ENST00000582040 TRIM75PA6NK02 468 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 GRK4P32298 578 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 PRKCZQ05513 592 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 OS9Q13438 667 aaPredicted RBP17.7■□□□□ 0.42
CCDC57-214ENST00000582040 POLA2Q14181 598 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 MTFR1Q15390 333 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 TNNI3KQ59H18 835 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 OSBPL5Q9H0X9 879 aaPredicted RBP17.7■□□□□ 0.42
CCDC57-214ENST00000582040 C1orf115Q9H7X2 142 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.7■□□□□ 0.424e-7■■■■■ 41
CCDC57-214ENST00000582040 LRP2BPQ9P2M1 347 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 FPGT-TNNI3KV9GXZ4 949 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 LOC285556D6RIA3 1793 aa17.7■□□□□ 0.42
CCDC57-214ENST00000582040 TBC1D12O60347 775 aa17.69■□□□□ 0.42
CCDC57-214ENST00000582040 MAP4K4O95819 1239 aaPredicted RBP17.69■□□□□ 0.42
CCDC57-214ENST00000582040 FCGRTP55899 365 aa17.69■□□□□ 0.42
CCDC57-214ENST00000582040 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCDC57-214ENST00000582040 TTC39AQ5SRH9 613 aa17.69■□□□□ 0.42
CCDC57-214ENST00000582040 TEX11Q8IYF3 940 aa17.69■□□□□ 0.42
CCDC57-214ENST00000582040 DBNDD2Q9BQY9 259 aa17.69■□□□□ 0.42
CCDC57-214ENST00000582040 SNRKQ9NRH2 765 aa17.69■□□□□ 0.42
CCDC57-214ENST00000582040 SLC45A1Q9Y2W3 748 aa17.69■□□□□ 0.42
CCDC57-214ENST00000582040 SIPA1L1O43166 1804 aa17.69■□□□□ 0.42
CCDC57-214ENST00000582040 SSH3Q8TE77 659 aa17.68■□□□□ 0.42
CCDC57-214ENST00000582040 SMCR8Q8TEV9 937 aaPredicted RBP17.68■□□□□ 0.42
CCDC57-214ENST00000582040 SHISA4Q96DD7 197 aa17.68■□□□□ 0.42
CCDC57-214ENST00000582040 GPR108Q9NPR9 543 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms