RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PCDHAC2Q9Y5I4 1007 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 UBE2Q2LH0YL09 131 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 MYO1BO43795 1136 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 MAP4K1Q92918 833 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 CSRNP1Q96S65 589 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 DENND2AQ9ULE3 1009 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 PPP2R3BQ9Y5P8 575 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 RBM8AQ9Y5S9 174 aaKnown RBP15.03■□□□□ -0
SRSF1-204ENST00000581979 MAST3O60307 1309 aa15.02■□□□□ -0
SRSF1-204ENST00000581979 FRAT2O75474 233 aaPredicted RBP15.02□□□□□ -0.01
SRSF1-204ENST00000581979 ADD2P35612 726 aa15.02□□□□□ -0.01
SRSF1-204ENST00000581979 SLC9C2Q5TAH2 1124 aa15.02□□□□□ -0.01
SRSF1-204ENST00000581979 APPBP2Q92624 585 aa15.02□□□□□ -0.01
SRSF1-204ENST00000581979 SERPINA10Q9UK55 444 aa15.02□□□□□ -0.01
SRSF1-204ENST00000581979 M0R2C6 588 aa15.01□□□□□ -0.01
SRSF1-204ENST00000581979 SEMA3EO15041 775 aa15.01□□□□□ -0.01
SRSF1-204ENST00000581979 MAP3K12Q12852 859 aa15.01□□□□□ -0.01
SRSF1-204ENST00000581979 TTLL12Q14166 644 aaPredicted RBP15.01□□□□□ -0.01
SRSF1-204ENST00000581979 TTF2Q9UNY4 1162 aaKnown RBP15.01□□□□□ -0.01
SRSF1-204ENST00000581979 ST18O60284 1047 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 LDLRAD1Q5T700 205 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 ARMC9Q7Z3E5 817 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 TBC1D22AQ8WUA7 517 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 OSBP2Q969R2 916 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 RNF186Q9NXI6 227 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 SNX14Q9Y5W7 946 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 CASP8AP2Q9UKL3 1982 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 CLRN2A0PK11 232 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 PDE6AP16499 860 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 ZKSCAN1P17029 563 aaPredicted RBP15□□□□□ -0.01
SRSF1-204ENST00000581979 RBM5P52756 815 aaKnown RBP eCLIP15□□□□□ -0.015e-41■■■■□ 19.3
SRSF1-204ENST00000581979 NECTIN1Q15223 517 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 UBE3CQ15386 1083 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 MAP3K11Q16584 847 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 RNF20Q5VTR2 975 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 IL17RAQ96F46 866 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 LRP2BPQ9P2M1 347 aa15□□□□□ -0.01
SRSF1-204ENST00000581979 U3KPZ7 1027 aaPredicted RBP15□□□□□ -0.01
SRSF1-204ENST00000581979 ZNF532Q9HCE3 1301 aa14.99□□□□□ -0.01
SRSF1-204ENST00000581979 HDLBPQ00341 1268 aaKnown RBP14.99□□□□□ -0.01
SRSF1-204ENST00000581979 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
SRSF1-204ENST00000581979 CREB3L3Q68CJ9 461 aa14.99□□□□□ -0.01
SRSF1-204ENST00000581979 ABHD8Q96I13 439 aa14.99□□□□□ -0.01
SRSF1-204ENST00000581979 DSCC1Q9BVC3 393 aa14.99□□□□□ -0.01
SRSF1-204ENST00000581979 ABCF2Q9UG63 623 aa14.99□□□□□ -0.01
SRSF1-204ENST00000581979 SSC5DA1L4H1 1573 aa14.99□□□□□ -0.01
SRSF1-204ENST00000581979 TRPA1O75762 1119 aa14.98□□□□□ -0.01
SRSF1-204ENST00000581979 NEK4P51957 841 aa14.98□□□□□ -0.01
SRSF1-204ENST00000581979 SUPT20HL1Q3ZLR7 823 aa14.98□□□□□ -0.01
SRSF1-204ENST00000581979 RASEFQ8IZ41 740 aa14.98□□□□□ -0.01
SRSF1-204ENST00000581979 MAGEB6Q8N7X4 407 aa14.98□□□□□ -0.01
SRSF1-204ENST00000581979 KCNB2Q92953 911 aa14.98□□□□□ -0.01
SRSF1-204ENST00000581979 PUS7LQ9H0K6 701 aaKnown RBP14.98□□□□□ -0.01
SRSF1-204ENST00000581979 PDS5AQ29RF7 1337 aaKnown RBP14.98□□□□□ -0.01
SRSF1-204ENST00000581979 UNCXA6NJT0 531 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 K7ELQ4 463 aaPredicted RBP14.97□□□□□ -0.01
SRSF1-204ENST00000581979 SLC27A2O14975 620 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 CD2BP2O95400 341 aaKnown RBP14.97□□□□□ -0.01
SRSF1-204ENST00000581979 HSPD1P10809 573 aaKnown RBP14.97□□□□□ -0.01
SRSF1-204ENST00000581979 CRKP46108 304 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 CHAF1AQ13111 956 aaPredicted RBP14.97□□□□□ -0.01
SRSF1-204ENST00000581979 GRIK5Q16478 980 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 MRIQ9BWK5 157 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 VEZTQ9HBM0 779 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 RAI14Q9P0K7 980 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 ZNF70Q9UC06 446 aaPredicted RBP14.97□□□□□ -0.01
SRSF1-204ENST00000581979 ANGEL1Q9UNK9 670 aaKnown RBP14.97□□□□□ -0.01
SRSF1-204ENST00000581979 SUGT1Q9Y2Z0 365 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 TCRBV5S4A2TA0A5A2 114 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 GPAA1O43292 621 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 PPP1R12BO60237 982 aaPredicted RBP14.97□□□□□ -0.01
SRSF1-204ENST00000581979 TM4SF4P48230 202 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 TNFAIP1Q13829 316 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 PRKG1Q13976 671 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 RASA3Q14644 834 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 VPS53Q5VIR6 699 aa14.97□□□□□ -0.01
SRSF1-204ENST00000581979 TDRD3Q9H7E2 651 aaKnown RBP14.97□□□□□ -0.01
SRSF1-204ENST00000581979 MAST2Q6P0Q8 1798 aa14.96□□□□□ -0.01
SRSF1-204ENST00000581979 NBPF12Q5TAG4 269 aaPredicted RBP14.96□□□□□ -0.01
SRSF1-204ENST00000581979 FZD1Q9UP38 647 aa14.96□□□□□ -0.01
SRSF1-204ENST00000581979 ZBTB22O15209 634 aa14.95□□□□□ -0.02
SRSF1-204ENST00000581979 SPRYD3Q8NCJ5 442 aa14.95□□□□□ -0.02
SRSF1-204ENST00000581979 IL27Q8NEV9 243 aa14.95□□□□□ -0.02
SRSF1-204ENST00000581979 TEKT1Q969V4 418 aa14.95□□□□□ -0.02
SRSF1-204ENST00000581979 JAKMIP1Q96N16 626 aaKnown RBP14.95□□□□□ -0.02
SRSF1-204ENST00000581979 UPF3BQ9BZI7 483 aaKnown RBP14.95□□□□□ -0.02
SRSF1-204ENST00000581979 CASTP20810 708 aaKnown RBP14.95□□□□□ -0.02
SRSF1-204ENST00000581979 SPRYD7Q5W111 196 aa14.95□□□□□ -0.02
SRSF1-204ENST00000581979 WDR66Q8TBY9 1149 aa14.95□□□□□ -0.02
SRSF1-204ENST00000581979 ZDHHC15Q96MV8 337 aa14.95□□□□□ -0.02
SRSF1-204ENST00000581979 TEPSINQ96N21 525 aa14.95□□□□□ -0.02
SRSF1-204ENST00000581979 MCOLN1Q9GZU1 580 aa14.95□□□□□ -0.02
SRSF1-204ENST00000581979 USP2O75604 605 aaPredicted RBP14.94□□□□□ -0.02
SRSF1-204ENST00000581979 CYP7A1P22680 504 aa14.94□□□□□ -0.02
SRSF1-204ENST00000581979 PSMA5P28066 241 aa14.94□□□□□ -0.02
SRSF1-204ENST00000581979 MCM2P49736 904 aa14.94□□□□□ -0.02
SRSF1-204ENST00000581979 SREBF2Q12772 1141 aa14.94□□□□□ -0.02
SRSF1-204ENST00000581979 KRT32Q14532 448 aa14.94□□□□□ -0.02
SRSF1-204ENST00000581979 ADCK5Q3MIX3 580 aa14.94□□□□□ -0.02
SRSF1-204ENST00000581979 ZGPATQ8N5A5 531 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms