RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 MANSC4A6NHS7 340 aaPredicted RBP15.15■□□□□ 0.02
SMARCD2-209ENST00000581832 MAP4K4O95819 1239 aaPredicted RBP15.15■□□□□ 0.02
SMARCD2-209ENST00000581832 PPP4CP60510 307 aa15.15■□□□□ 0.02
SMARCD2-209ENST00000581832 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMARCD2-209ENST00000581832 ZKSCAN4Q969J2 545 aaPredicted RBP15.15■□□□□ 0.02
SMARCD2-209ENST00000581832 OPTNQ96CV9 577 aa15.15■□□□□ 0.02
SMARCD2-209ENST00000581832 HOOK2Q96ED9 719 aa15.15■□□□□ 0.02
SMARCD2-209ENST00000581832 PTPN18Q99952 460 aa15.15■□□□□ 0.02
SMARCD2-209ENST00000581832 CFHR5Q9BXR6 569 aa15.15■□□□□ 0.02
SMARCD2-209ENST00000581832 PHF20L1A8MW92 1017 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 IGF2BP3O00425 579 aaKnown RBP eCLIP15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 SLURP2P0DP57 97 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 INPP5BP32019 993 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 INHBEP58166 350 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 SREBF2Q12772 1141 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 DCAF15Q66K64 600 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 NAA16Q6N069 864 aaPredicted RBP15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 IFNL1Q8IU54 200 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 WRNIP1Q96S55 665 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 ZNF341Q9BYN7 854 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 R3HDMLQ9H3Y0 253 aa15.14■□□□□ 0.01
SMARCD2-209ENST00000581832 SPDYE5A6NIY4 337 aa15.13■□□□□ 0.01
SMARCD2-209ENST00000581832 TBC1D8O95759 1140 aa15.13■□□□□ 0.01
SMARCD2-209ENST00000581832 SH3RF3Q8TEJ3 882 aaPredicted RBP15.13■□□□□ 0.01
SMARCD2-209ENST00000581832 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.13■□□□□ 0.01
SMARCD2-209ENST00000581832 SIPA1L1O43166 1804 aa15.13■□□□□ 0.01
SMARCD2-209ENST00000581832 SMARCA5O60264 1052 aaPredicted RBP15.12■□□□□ 0.01
SMARCD2-209ENST00000581832 PICALMQ13492 652 aa15.12■□□□□ 0.01
SMARCD2-209ENST00000581832 NOL9Q5SY16 702 aaKnown RBP15.12■□□□□ 0.01
SMARCD2-209ENST00000581832 CRBNQ96SW2 442 aa15.12■□□□□ 0.01
SMARCD2-209ENST00000581832 LRRCC1Q9C099 1032 aa15.12■□□□□ 0.01
SMARCD2-209ENST00000581832 AATFQ9NY61 560 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMARCD2-209ENST00000581832 CSADQ9Y600 493 aa15.12■□□□□ 0.01
SMARCD2-209ENST00000581832 COL2A1P02458 1487 aaPredicted RBP15.12■□□□□ 0.01
SMARCD2-209ENST00000581832 TBC1D12O60347 775 aa15.11■□□□□ 0.01
SMARCD2-209ENST00000581832 IFIT2P09913 472 aaKnown RBP15.11■□□□□ 0.01
SMARCD2-209ENST00000581832 NOM1Q5C9Z4 860 aaKnown RBP15.11■□□□□ 0.01
SMARCD2-209ENST00000581832 ERO1BQ86YB8 467 aa15.11■□□□□ 0.01
SMARCD2-209ENST00000581832 BRI3BPQ8WY22 251 aa15.11■□□□□ 0.01
SMARCD2-209ENST00000581832 OSBPL5Q9H0X9 879 aaPredicted RBP15.11■□□□□ 0.01
SMARCD2-209ENST00000581832 PHIPQ8WWQ0 1821 aa15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 HTTP42858 3142 aa15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 IRF6O14896 467 aa15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 IDH1O75874 414 aaKnown RBP15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 ATP5JP18859 108 aa15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 DYNLL1P63167 89 aaKnown RBP15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 PPATQ06203 517 aa15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 TMED8Q6PL24 325 aaPredicted RBP15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 TEX11Q8IYF3 940 aa15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 MAGEB6Q8N7X4 407 aa15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 EDC3Q96F86 508 aaKnown RBP15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 OTUD5Q96G74 571 aa15.1■□□□□ 0.01
SMARCD2-209ENST00000581832 BAG3O95817 575 aa15.09■□□□□ 0.01
SMARCD2-209ENST00000581832 ALDH1A1P00352 501 aa15.09■□□□□ 0.01
SMARCD2-209ENST00000581832 CYP7A1P22680 504 aa15.09■□□□□ 0.01
SMARCD2-209ENST00000581832 PPIL2Q13356 520 aa15.09■□□□□ 0.01
SMARCD2-209ENST00000581832 ZSCAN29Q8IWY8 852 aaPredicted RBP15.09■□□□□ 0.01
SMARCD2-209ENST00000581832 PTPRFP10586 1907 aa15.09■□□□□ 0.01
SMARCD2-209ENST00000581832 MYH1P12882 1939 aa15.09■□□□□ 0.01
SMARCD2-209ENST00000581832 CENPFP49454 3210 aa15.08■□□□□ 0.01
SMARCD2-209ENST00000581832 TCRBV5S4A2TA0A5A2 114 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 GPR25O00155 361 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 PLCG2P16885 1265 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 GTF2A2P52657 109 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 MAP3K12Q12852 859 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 MOGSQ13724 837 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 TTF1Q15361 905 aaPredicted RBP15.08■□□□□ 0
SMARCD2-209ENST00000581832 METTL16Q86W50 562 aaKnown RBP15.08■□□□□ 0
SMARCD2-209ENST00000581832 TGFBRAP1Q8WUH2 860 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 ZNF296Q8WUU4 475 aaPredicted RBP15.08■□□□□ 0
SMARCD2-209ENST00000581832 HAUS7Q99871 368 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 RIOK1Q9BRS2 568 aaKnown RBP15.08■□□□□ 0
SMARCD2-209ENST00000581832 BOLA2Q9H3K6 86 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 KCNH4Q9UQ05 1017 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 DOCK1Q14185 1865 aa15.08■□□□□ 0
SMARCD2-209ENST00000581832 MYH7P12883 1935 aa15.07■□□□□ 0
SMARCD2-209ENST00000581832 CCL15-CCL14A0A0B4J2E2 113 aa15.07■□□□□ 0
SMARCD2-209ENST00000581832 GOLIM4O00461 696 aa15.07■□□□□ 0
SMARCD2-209ENST00000581832 RRP1BQ14684 758 aaKnown RBP15.07■□□□□ 0
SMARCD2-209ENST00000581832 CCL15Q16663 113 aa15.07■□□□□ 0
SMARCD2-209ENST00000581832 FAM43AQ8N2R8 423 aa15.07■□□□□ 0
SMARCD2-209ENST00000581832 MIGA1Q8NAN2 632 aa15.07■□□□□ 0
SMARCD2-209ENST00000581832 FLT1P17948 1338 aa15.07■□□□□ 0
SMARCD2-209ENST00000581832 FAM196BA6NMK8 535 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 CTNND1O60716 968 aaKnown RBP15.06■□□□□ 0
SMARCD2-209ENST00000581832 PDE6AP16499 860 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 PTPRAP18433 802 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 SLC9C2Q5TAH2 1124 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 MAPKAPK5Q8IW41 473 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 SCYL3Q8IZE3 742 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 DNAJC2Q99543 621 aaKnown RBP15.06■□□□□ 0
SMARCD2-209ENST00000581832 NOL10Q9BSC4 688 aaKnown RBP15.06■□□□□ 0
SMARCD2-209ENST00000581832 MCOLN1Q9GZU1 580 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 BCL11AQ9H165 835 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 DNAJC18Q9H819 358 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 PAG1Q9NWQ8 432 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 ATAD5Q96QE3 1844 aa15.06■□□□□ 0
SMARCD2-209ENST00000581832 BTBD19C9JJ37 291 aa15.05■□□□□ -0
SMARCD2-209ENST00000581832 CETPP11597 493 aa15.05■□□□□ -0
SMARCD2-209ENST00000581832 CRHR2Q13324 411 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms