RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 GNL3LQ9NVN8 582 aaKnown RBP12□□□□□ -0.49
TOP3A-211ENST00000581536 AKAP2Q9Y2D5 859 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 COG6Q9Y2V7 657 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 SSC5DA1L4H1 1573 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 RASGRF1Q13972 1273 aa11.99□□□□□ -0.49
TOP3A-211ENST00000581536 PI16Q6UXB8 463 aa11.99□□□□□ -0.49
TOP3A-211ENST00000581536 ARMC9Q7Z3E5 817 aa11.99□□□□□ -0.49
TOP3A-211ENST00000581536 TNS4Q8IZW8 715 aa11.99□□□□□ -0.49
TOP3A-211ENST00000581536 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.497e-7■■□□□ 12.3
TOP3A-211ENST00000581536 CLMNQ96JQ2 1002 aa11.99□□□□□ -0.49
TOP3A-211ENST00000581536 ZDHHC15Q96MV8 337 aa11.99□□□□□ -0.49
TOP3A-211ENST00000581536 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
TOP3A-211ENST00000581536 PRDM10Q9NQV6 1147 aa11.99□□□□□ -0.49
TOP3A-211ENST00000581536 DENND2AQ9ULE3 1009 aa11.99□□□□□ -0.49
TOP3A-211ENST00000581536 DPYSL4O14531 572 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 TRPA1O75762 1119 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 LDHBP07195 334 aaKnown RBP11.98□□□□□ -0.49
TOP3A-211ENST00000581536 NUDT7P0C024 238 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 CEP85Q6P2H3 762 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 HHIPL2Q6UWX4 724 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 TBC1D9Q6ZT07 1266 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 RNF186Q9NXI6 227 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 SUGT1Q9Y2Z0 365 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 DAGLAQ9Y4D2 1042 aa11.98□□□□□ -0.49
TOP3A-211ENST00000581536 EVI5O60447 810 aa11.97□□□□□ -0.49
TOP3A-211ENST00000581536 GORABQ5T7V8 394 aa11.97□□□□□ -0.49
TOP3A-211ENST00000581536 CDC42EP5Q6NZY7 148 aa11.97□□□□□ -0.49
TOP3A-211ENST00000581536 ZFPM1Q8IX07 1006 aa11.97□□□□□ -0.49
TOP3A-211ENST00000581536 SLC10A4Q96EP9 437 aa11.97□□□□□ -0.49
TOP3A-211ENST00000581536 DBNDD2Q9BQY9 259 aa11.97□□□□□ -0.49
TOP3A-211ENST00000581536 HMG20BQ9P0W2 317 aa11.97□□□□□ -0.49
TOP3A-211ENST00000581536 ABCF2Q9UG63 623 aa11.97□□□□□ -0.49
TOP3A-211ENST00000581536 NOP58Q9Y2X3 529 aaKnown RBP11.97□□□□□ -0.49
TOP3A-211ENST00000581536 PPP2R3BQ9Y5P8 575 aa11.97□□□□□ -0.49
TOP3A-211ENST00000581536 OTOFQ9HC10 1997 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 SPDYE16A6NNV3 312 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-211ENST00000581536 SEMA3EO15041 775 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 PPP1R12BO60237 982 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-211ENST00000581536 GJA5P36382 358 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 MCAMP43121 646 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 EMP3P54852 163 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 TCP10Q12799 353 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 OS9Q13438 667 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-211ENST00000581536 MVPQ14764 893 aaKnown RBP11.96□□□□□ -0.49
TOP3A-211ENST00000581536 MAP3K11Q16584 847 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 TNNI3KQ59H18 835 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 SIRT2Q8IXJ6 389 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 ZNF384Q8TF68 577 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 MARVELD3Q96A59 401 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 CCDC8Q9H0W5 538 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-211ENST00000581536 SNRKQ9NRH2 765 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 USP40Q9NVE5 1235 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 EXOC6BQ9Y2D4 811 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 FPGT-TNNI3KV9GXZ4 949 aa11.96□□□□□ -0.49
TOP3A-211ENST00000581536 SALL1Q9NSC2 1324 aa11.95□□□□□ -0.5
TOP3A-211ENST00000581536 TNNI2P48788 182 aa11.95□□□□□ -0.5
TOP3A-211ENST00000581536 NFIAQ12857 509 aa11.95□□□□□ -0.5
TOP3A-211ENST00000581536 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
TOP3A-211ENST00000581536 SPATA5Q8NB90 893 aa11.95□□□□□ -0.5
TOP3A-211ENST00000581536 EAF2Q96CJ1 260 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-211ENST00000581536 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
TOP3A-211ENST00000581536 MAST3O60307 1309 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 TBC1D8O95759 1140 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 SLURP2P0DP57 97 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 MS4A1P11836 297 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 ARID4AP29374 1257 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-211ENST00000581536 TM4SF4P48230 202 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 MECOMQ03112 1051 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 TNFAIP1Q13829 316 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-211ENST00000581536 ERICH6Q7L0X2 663 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 YTHDC1Q96MU7 727 aaKnown RBP11.94□□□□□ -0.5
TOP3A-211ENST00000581536 BCL11AQ9H165 835 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 R3HDMLQ9H3Y0 253 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 ELP3Q9H9T3 547 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 GPR108Q9NPR9 543 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 FAM198AQ9UFP1 575 aa11.94□□□□□ -0.5
TOP3A-211ENST00000581536 APBB1O00213 710 aa11.93□□□□□ -0.5
TOP3A-211ENST00000581536 IREB2P48200 963 aaKnown RBP11.93□□□□□ -0.5
TOP3A-211ENST00000581536 FAM83AQ86UY5 434 aa11.93□□□□□ -0.5
TOP3A-211ENST00000581536 FAM151AQ8WW52 585 aa11.93□□□□□ -0.5
TOP3A-211ENST00000581536 ZKSCAN4Q969J2 545 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-211ENST00000581536 WNK4Q96J92 1243 aa11.93□□□□□ -0.5
TOP3A-211ENST00000581536 DBNLQ9UJU6 430 aaKnown RBP11.93□□□□□ -0.5
TOP3A-211ENST00000581536 DDX19BQ9UMR2 479 aa11.93□□□□□ -0.5
TOP3A-211ENST00000581536 NDUFB9Q9Y6M9 179 aa11.93□□□□□ -0.5
TOP3A-211ENST00000581536 CDK5RAP2Q96SN8 1893 aa11.92□□□□□ -0.5
TOP3A-211ENST00000581536 CA12O43570 354 aa11.92□□□□□ -0.5
TOP3A-211ENST00000581536 CYP2E1P05181 493 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-211ENST00000581536 CCDC158Q5M9N0 1113 aa11.92□□□□□ -0.5
TOP3A-211ENST00000581536 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
TOP3A-211ENST00000581536 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
TOP3A-211ENST00000581536 SPTY2D1Q68D10 685 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-211ENST00000581536 DZIP1Q86YF9 867 aaKnown RBP11.92□□□□□ -0.5
TOP3A-211ENST00000581536 ANKRD13AQ8IZ07 590 aa11.92□□□□□ -0.5
TOP3A-211ENST00000581536 ZGPATQ8N5A5 531 aaKnown RBP11.92□□□□□ -0.5
TOP3A-211ENST00000581536 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms