RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 H7C1W4 665 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 INPP5BP32019 993 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 CRKP46108 304 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 IRF5Q13568 498 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 NEUROD2Q15784 382 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 GRIK5Q16478 980 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 CWF19L2Q2TBE0 894 aaKnown RBP9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 ANKLE1Q8NAG6 615 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 SYMPKQ92797 1274 aaKnown RBP9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 FAM122AQ96E09 287 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 MPHOSPH8Q99549 860 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 FBXO3Q9UK99 471 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 MAP3K2Q9Y2U5 619 aa9.9□□□□□ -0.82
SMARCE1-217ENST00000580654 PTPRFP10586 1907 aa9.9□□□□□ -0.83
SMARCE1-217ENST00000580654 CSF1RP07333 972 aa9.89□□□□□ -0.83
SMARCE1-217ENST00000580654 TNNI2P48788 182 aa9.89□□□□□ -0.83
SMARCE1-217ENST00000580654 CASP7P55210 303 aa9.89□□□□□ -0.83
SMARCE1-217ENST00000580654 MFSD14BQ5SR56 506 aa9.89□□□□□ -0.83
SMARCE1-217ENST00000580654 UBE3BQ7Z3V4 1068 aa9.89□□□□□ -0.83
SMARCE1-217ENST00000580654 ZNF804AQ7Z570 1209 aa9.89□□□□□ -0.83
SMARCE1-217ENST00000580654 PLA2G12BQ9BX93 195 aa9.89□□□□□ -0.83
SMARCE1-217ENST00000580654 MBIPQ9NS73 344 aa9.89□□□□□ -0.83
SMARCE1-217ENST00000580654 PLXNB2O15031 1838 aa9.89□□□□□ -0.83
SMARCE1-217ENST00000580654 PFASO15067 1338 aa9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 NEURL1BA8MQ27 555 aa9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 TDRD7Q8NHU6 1098 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 MAFAQ8NHW3 353 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 PARK7Q99497 189 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 CDX2Q99626 313 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 NBPF3Q9H094 633 aa9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 C11orf49Q9H6J7 331 aa9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 AK9Q5TCS8 1911 aa9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 CDH23Q9H251 3354 aa9.88□□□□□ -0.83
SMARCE1-217ENST00000580654 LTBP2Q14767 1821 aa9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 PHIPQ8WWQ0 1821 aa9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 PI4KAP2A4QPH2 592 aa9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 ELL2O00472 640 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 TRIM26Q12899 539 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 TRIM32Q13049 653 aa9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 KSR2Q6VAB6 950 aa9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 MIGA2Q7L4E1 593 aa9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 CCDC146Q8IYE0 955 aa9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 PI4KAP1Q8N8J0 262 aa9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 ZNF112Q9UJU3 913 aa9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 RPAP1Q9BWH6 1393 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-217ENST00000580654 MAST2Q6P0Q8 1798 aa9.86□□□□□ -0.83
SMARCE1-217ENST00000580654 TNPO2O14787 897 aaKnown RBP9.86□□□□□ -0.83
SMARCE1-217ENST00000580654 DDX58O95786 925 aaKnown RBP9.86□□□□□ -0.83
SMARCE1-217ENST00000580654 ZNF853P0CG23 659 aa9.86□□□□□ -0.83
SMARCE1-217ENST00000580654 ZNF697Q5TEC3 545 aa9.86□□□□□ -0.83
SMARCE1-217ENST00000580654 FAM83AQ86UY5 434 aa9.86□□□□□ -0.83
SMARCE1-217ENST00000580654 ZNF341Q9BYN7 854 aa9.86□□□□□ -0.83
SMARCE1-217ENST00000580654 OGDHLQ9ULD0 1010 aa9.86□□□□□ -0.83
SMARCE1-217ENST00000580654 FRMPD3Q5JV73 1810 aa9.85□□□□□ -0.83
SMARCE1-217ENST00000580654 COL6A1P12109 1028 aa9.85□□□□□ -0.83
SMARCE1-217ENST00000580654 GYG1P46976 350 aa9.85□□□□□ -0.83
SMARCE1-217ENST00000580654 NOL9Q5SY16 702 aaKnown RBP9.85□□□□□ -0.83
SMARCE1-217ENST00000580654 DCAF15Q66K64 600 aa9.85□□□□□ -0.83
SMARCE1-217ENST00000580654 C8orf58Q8NAV2 365 aa9.85□□□□□ -0.83
SMARCE1-217ENST00000580654 MYLIPQ8WY64 445 aa9.85□□□□□ -0.83
SMARCE1-217ENST00000580654 SEMA6BQ9H3T3 888 aa9.85□□□□□ -0.83
SMARCE1-217ENST00000580654 TAOK2Q9UL54 1235 aa9.85□□□□□ -0.83
SMARCE1-217ENST00000580654 PIEZO1Q92508 2521 aa9.84□□□□□ -0.83
SMARCE1-217ENST00000580654 ANKRD18BA2A2Z9 1011 aa9.84□□□□□ -0.83
SMARCE1-217ENST00000580654 TNFRSF10AO00220 468 aa9.84□□□□□ -0.83
SMARCE1-217ENST00000580654 GCKRQ14397 625 aa9.84□□□□□ -0.83
SMARCE1-217ENST00000580654 LRRC26Q2I0M4 334 aa9.84□□□□□ -0.83
SMARCE1-217ENST00000580654 APOBEC3HQ6NTF7 200 aaKnown RBP9.84□□□□□ -0.83
SMARCE1-217ENST00000580654 TMEM92Q6UXU6 159 aa9.84□□□□□ -0.83
SMARCE1-217ENST00000580654 FAM84BQ96KN1 310 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-217ENST00000580654 TTYH1Q9H313 450 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-217ENST00000580654 BDP1A6H8Y1 2624 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 A0A0G2JLL6 359 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 CXCL11O14625 94 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 PLIN1O60240 522 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 HMGCRP04035 888 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 LSM11P83369 360 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 FOXO4P98177 505 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 HDLBPQ00341 1268 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 FKBP1CQ5VVH2 108 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 G2E3Q7L622 706 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 PRRT2Q7Z6L0 340 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 HOOK2Q96ED9 719 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 ZNF594Q96JF6 807 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 ZDHHC15Q96MV8 337 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 PLA2G2EQ9NZK7 142 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 GJD2Q9UKL4 321 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 NCOR1O75376 2440 aa9.83□□□□□ -0.84
SMARCE1-217ENST00000580654 SYNGAP1Q96PV0 1343 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 DOCK2Q92608 1830 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 HIBADHP31937 336 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 NEXNQ0ZGT2 675 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 MAP3K21Q5TCX8 1036 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 ANKRD13CQ8N6S4 541 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 TSPYL6Q8N831 410 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 USP38Q8NB14 1042 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 TEKT1Q969V4 418 aa9.82□□□□□ -0.84
SMARCE1-217ENST00000580654 COA7Q96BR5 231 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms