RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	DEFB129	Q9H1M3	183 aa		7.92	□□□□□ -1.14
KPNB1-209	ENST00000580158	PODXL2	Q9NZ53	605 aa		7.92	□□□□□ -1.14
KPNB1-209	ENST00000580158	SRRD	Q9UH36	339 aa		7.92	□□□□□ -1.14
KPNB1-209	ENST00000580158	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	7.92	□□□□□ -1.14
KPNB1-209	ENST00000580158	KNSTRN	Q9Y448	316 aa		7.92	□□□□□ -1.14
KPNB1-209	ENST00000580158	PPP2R3B	Q9Y5P8	575 aa		7.92	□□□□□ -1.14
KPNB1-209	ENST00000580158	MYO3B	Q8WXR4	1341 aa		7.92	□□□□□ -1.14
KPNB1-209	ENST00000580158	OTOF	Q9HC10	1997 aa		7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	CCL15-CCL14	A0A0B4J2E2	113 aa		7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	SASH1	O94885	1247 aa		7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	GJA5	P36382	358 aa		7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	MAGEA10	P43363	369 aa	Predicted RBP	7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	RPS8	P62241	208 aa	Known RBP	7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	TAF7	Q15545	349 aa	Predicted RBP	7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	CCL15	Q16663	113 aa		7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	BRICD5	Q6PL45	260 aa		7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	OPTN	Q96CV9	577 aa		7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	TIMELESS	Q9UNS1	1208 aa		7.91	□□□□□ -1.14
KPNB1-209	ENST00000580158	FAM205A	Q6ZU69	1335 aa		7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	MYPN	Q86TC9	1320 aa		7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	GPR37	O15354	613 aa		7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	MYO1B	O43795	1136 aa		7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	PSMC4	P43686	418 aa		7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	MCM10	Q7L590	875 aa		7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	NLRP10	Q86W26	655 aa		7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	PAWR	Q96IZ0	340 aa	Known RBP	7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	SNX27	Q96L92	541 aa		7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	ELP3	Q9H9T3	547 aa		7.9	□□□□□ -1.14
KPNB1-209	ENST00000580158	TULP1	O00294	542 aa	Predicted RBP	7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	USP2	O75604	605 aa	Predicted RBP	7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	SYN1	P17600	705 aa		7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	SF3B3	Q15393	1217 aa	Known RBP	7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	FAM43A	Q8N2R8	423 aa		7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	PNISR	Q8TF01	805 aa	Known RBP	7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	BRI3BP	Q8WY22	251 aa		7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	CDX2	Q99626	313 aa	Predicted RBP	7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	UNC93B1	Q9H1C4	597 aa		7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	ZCCHC17	Q9NP64	241 aa	Known RBP	7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	TOR4A	Q9NXH8	423 aa		7.89	□□□□□ -1.15
KPNB1-209	ENST00000580158	SYNGAP1	Q96PV0	1343 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	TTC24	A2A3L6	582 aa	Predicted RBP	7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	AXIN1	O15169	862 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	HTATSF1	O43719	755 aa	Known RBP	7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	ATP2B4	P23634	1241 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	DLGAP5	Q15398	846 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158		Q3C1V9	767 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	STRIP1	Q5VSL9	837 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	GPIHBP1	Q8IV16	184 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	CRIPAK	Q8N1N5	446 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	DEFB118	Q96PH6	123 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	PHOX2B	Q99453	314 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	MIS18A	Q9NYP9	233 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	HCN4	Q9Y3Q4	1203 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	SSC5D	A1L4H1	1573 aa		7.88	□□□□□ -1.15
KPNB1-209	ENST00000580158	AVP	P01185	164 aa		7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	CETP	P11597	493 aa		7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	PRKAR2B	P31323	418 aa		7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.87	□□□□□ -1.15	1e-16	■□□□□ 10.7
KPNB1-209	ENST00000580158	CTC1	Q2NKJ3	1217 aa		7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	MSS51	Q4VC12	460 aa		7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	DACT2	Q5SW24	774 aa		7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	KIAA0825	Q8IV33	1275 aa		7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	PHACTR3	Q96KR7	559 aa		7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	MXD3	Q9BW11	206 aa		7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	SPTBN5	Q9NRC6	3674 aa	Known RBP	7.87	□□□□□ -1.15
KPNB1-209	ENST00000580158	DLG5	Q8TDM6	1919 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	ZNF804B	A4D1E1	1349 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	XDH	P47989	1333 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	FOSL2	P15408	326 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	FCGRT	P55899	365 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	DCTN1	Q14203	1278 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	TTLL5	Q6EMB2	1281 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	C17orf99	Q6UX52	265 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	TREML4	Q6UXN2	200 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	THUMPD2	Q9BTF0	503 aa	Known RBP	7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	C1QTNF1	Q9BXJ1	281 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	PRDM9	Q9NQV7	894 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	CSAD	Q9Y600	493 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	DOCK3	Q8IZD9	2030 aa		7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	DDX60L	Q5H9U9	1706 aa	Known RBP	7.86	□□□□□ -1.15
KPNB1-209	ENST00000580158	TTC28	Q96AY4	2481 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	ADCY3	O60266	1144 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	HSP90B1	P14625	803 aa	Known RBP	7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	EIF2S2	P20042	333 aa	Known RBP	7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	EIF4A1	P60842	406 aa	Known RBP	7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	PRKCZ	Q05513	592 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	AIMP1	Q12904	312 aa	Known RBP	7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	RNF19B	Q6ZMZ0	732 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	MYLIP	Q8WY64	445 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	FAM89A	Q96GI7	184 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	ZBED3	Q96IU2	234 aa	Predicted RBP	7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	SEMA6B	Q9H3T3	888 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	VEZT	Q9HBM0	779 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	DACH1	Q9UI36	760 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	CPA4	Q9UI42	421 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	GTF3C3	Q9Y5Q9	886 aa		7.85	□□□□□ -1.15
KPNB1-209	ENST00000580158	ADGRA2	Q96PE1	1338 aa		7.84	□□□□□ -1.15
KPNB1-209	ENST00000580158	BTBD19	C9JJ37	291 aa		7.84	□□□□□ -1.15
KPNB1-209	ENST00000580158	INHA	P05111	366 aa		7.84	□□□□□ -1.15

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