RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 SLC9C1Q4G0N8 1177 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 NOL9Q5SY16 702 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SH3BP5LQ7L8J4 393 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SCYL3Q8IZE3 742 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ARHGAP39Q9C0H5 1083 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SNRKQ9NRH2 765 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 LRP2BPQ9P2M1 347 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 CPA4Q9UI42 421 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 PTCH2Q9Y6C5 1203 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 TNRC18O15417 2968 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 MYH2Q9UKX2 1941 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 RFX7Q2KHR2 1363 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ZBTB22O15209 634 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 LDHCP07864 332 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 LACTBP83111 547 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 TNNI3KQ59H18 835 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 CCDC158Q5M9N0 1113 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 NSUN4Q96CB9 384 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 NOL10Q9BSC4 688 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 KCNH4Q9UQ05 1017 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ZHX2Q9Y6X8 837 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 FPGT-TNNI3KV9GXZ4 949 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 DOCK2Q92608 1830 aa11.32□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ATRNL1Q5VV63 1379 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 GPR75-ASB3A0A0A6YYF3 556 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 FAM196BA6NMK8 535 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 RLBP1P12271 317 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 RHBDL3P58872 404 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ATP8B2P98198 1209 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 POLA2Q14181 598 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 GADL1Q6ZQY3 521 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ZNF384Q8TF68 577 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 DBNDD2Q9BQY9 259 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 TMEM106CQ9BVX2 250 aa11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-211ENST00000578996 HTTP42858 3142 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 TRIM75PA6NK02 468 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 PHF20L1A8MW92 1017 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 CXCL11O14625 94 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 FMNL1O95466 1100 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 CYP2C8P10632 490 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 PTPRAP18433 802 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SLC4A8Q2Y0W8 1093 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 PRPF38BQ5VTL8 546 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 CCDC84Q86UT8 332 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 TEX11Q8IYF3 940 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SSH3Q8TE77 659 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SH3TC2Q8TF17 1288 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ARMC5Q96C12 935 aa11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 PARK7Q99497 189 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 AATFQ9NY61 560 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ZBTB7BO15156 539 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 CTNND1O60716 968 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 EN2P19622 333 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 PSMC4P43686 418 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 MOGSQ13724 837 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 C17orf99Q6UX52 265 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 FASTKD5Q7L8L6 764 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 PANK1Q8TE04 598 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SH3RF3Q8TEJ3 882 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ZNF333Q96JL9 665 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 CCDC8Q9H0W5 538 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 OSBPL5Q9H0X9 879 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ZSWIM8A7E2V4 1837 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 CENPFP49454 3210 aa11.29□□□□□ -0.6
CDK5RAP3-211ENST00000578996 A0A0G2JLL6 359 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 BAG3O95817 575 aa11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 GNRH1P01148 92 aa11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 CYP2E1P05181 493 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ZAP70P43403 619 aa11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 GPAT2Q6NUI2 795 aa11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 PRRT2Q7Z6L0 340 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SMCR8Q8TEV9 937 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 TLR7Q9NYK1 1049 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 AFG3L2Q9Y4W6 797 aa11.28□□□□□ -0.6
CDK5RAP3-211ENST00000578996 MAP4K4O95819 1239 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 OSBPP22059 807 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 HOXD10P28358 340 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 CTGFP29279 349 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 FCGRTP55899 365 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MAP3K10Q02779 954 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MAPKAPK5Q8IW41 473 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 RAET1EQ8TD07 263 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 TGFBRAP1Q8WUH2 860 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 TRIM47Q96LD4 638 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 DBNLQ9UJU6 430 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 EXOC6BQ9Y2D4 811 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MYPNQ86TC9 1320 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms