RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PRDX5P30044 214 aa15.64■□□□□ 0.09
CCDC57-211ENST00000578187 MCAMP43121 646 aa15.64■□□□□ 0.09
CCDC57-211ENST00000578187 SP3Q02447 781 aa15.64■□□□□ 0.09
CCDC57-211ENST00000578187 SNAPC2Q13487 334 aa15.64■□□□□ 0.09
CCDC57-211ENST00000578187 TAF1CQ15572 869 aaPredicted RBP15.64■□□□□ 0.09
CCDC57-211ENST00000578187 SPTY2D1Q68D10 685 aaPredicted RBP15.64■□□□□ 0.09
CCDC57-211ENST00000578187 IL1RAPL2Q9NP60 686 aa15.64■□□□□ 0.09
CCDC57-211ENST00000578187 DAGLAQ9Y4D2 1042 aa15.64■□□□□ 0.09
CCDC57-211ENST00000578187 SUPT16HQ9Y5B9 1047 aaKnown RBP15.64■□□□□ 0.09
CCDC57-211ENST00000578187 TCP10Q12799 353 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 AAMPQ13685 434 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 DIXDC1Q155Q3 683 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 CCDC158Q5M9N0 1113 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 TTC39AQ5SRH9 613 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 PI16Q6UXB8 463 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 OTOP1Q7RTM1 612 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 AACSQ86V21 672 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 SPATA5Q8NB90 893 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 MS4A4AQ96JQ5 239 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 PTPN18Q99952 460 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 CCDC8Q9H0W5 538 aaPredicted RBP15.63■□□□□ 0.09
CCDC57-211ENST00000578187 DCTPP1Q9H773 170 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 USP40Q9NVE5 1235 aa15.63■□□□□ 0.09
CCDC57-211ENST00000578187 APBB1O00213 710 aa15.62■□□□□ 0.09
CCDC57-211ENST00000578187 PPIL2Q13356 520 aa15.62■□□□□ 0.09
CCDC57-211ENST00000578187 CDC42EP5Q6NZY7 148 aa15.62■□□□□ 0.09
CCDC57-211ENST00000578187 MIGA2Q7L4E1 593 aa15.62■□□□□ 0.09
CCDC57-211ENST00000578187 CLASRPQ8N2M8 674 aaKnown RBP15.62■□□□□ 0.09
CCDC57-211ENST00000578187 CD99L2Q8TCZ2 262 aa15.62■□□□□ 0.09
CCDC57-211ENST00000578187 BRI3BPQ8WY22 251 aa15.62■□□□□ 0.09
CCDC57-211ENST00000578187 ZKSCAN4Q969J2 545 aaPredicted RBP15.62■□□□□ 0.09
CCDC57-211ENST00000578187 EFCC1Q9HA90 598 aa15.62■□□□□ 0.09
CCDC57-211ENST00000578187 ZCCHC17Q9NP64 241 aaKnown RBP15.62■□□□□ 0.09
CCDC57-211ENST00000578187 ABCF2Q9UG63 623 aa15.62■□□□□ 0.09
CCDC57-211ENST00000578187 SNCAIPQ9Y6H5 919 aa15.62■□□□□ 0.09
CCDC57-211ENST00000578187 AK9Q5TCS8 1911 aa15.61■□□□□ 0.09
CCDC57-211ENST00000578187 PPATQ06203 517 aa15.61■□□□□ 0.09
CCDC57-211ENST00000578187 KIF22Q14807 665 aa15.61■□□□□ 0.09
CCDC57-211ENST00000578187 LRRCC1Q9C099 1032 aa15.61■□□□□ 0.09
CCDC57-211ENST00000578187 CDK5RAP2Q96SN8 1893 aa15.61■□□□□ 0.09
CCDC57-211ENST00000578187 ZSCAN29Q8IWY8 852 aaPredicted RBP15.6■□□□□ 0.09
CCDC57-211ENST00000578187 PTPN22Q9Y2R2 807 aa15.6■□□□□ 0.09
CCDC57-211ENST00000578187 GAKO14976 1311 aa15.6■□□□□ 0.09
CCDC57-211ENST00000578187 MYH7P12883 1935 aa15.6■□□□□ 0.09
CCDC57-211ENST00000578187 FOCADQ5VW36 1801 aa15.59■□□□□ 0.09
CCDC57-211ENST00000578187 IRF6O14896 467 aa15.59■□□□□ 0.09
CCDC57-211ENST00000578187 GSTO1P78417 241 aa15.59■□□□□ 0.09
CCDC57-211ENST00000578187 ERICH6Q7L0X2 663 aa15.59■□□□□ 0.09
CCDC57-211ENST00000578187 FAM43AQ8N2R8 423 aa15.59■□□□□ 0.09
CCDC57-211ENST00000578187 ENTPD3O75355 529 aa15.58■□□□□ 0.08
CCDC57-211ENST00000578187 IFIT2P09913 472 aaKnown RBP15.58■□□□□ 0.08
CCDC57-211ENST00000578187 NFIAQ12857 509 aa15.58■□□□□ 0.08
CCDC57-211ENST00000578187 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.08
CCDC57-211ENST00000578187 TBC1D9Q6ZT07 1266 aa15.58■□□□□ 0.08
CCDC57-211ENST00000578187 NBPF11Q86T75 865 aa15.58■□□□□ 0.08
CCDC57-211ENST00000578187 EXOC6Q8TAG9 804 aa15.58■□□□□ 0.08
CCDC57-211ENST00000578187 ZNF384Q8TF68 577 aa15.58■□□□□ 0.08
CCDC57-211ENST00000578187 IDI2Q9BXS1 227 aa15.58■□□□□ 0.08
CCDC57-211ENST00000578187 PICK1Q9NRD5 415 aa15.58■□□□□ 0.08
CCDC57-211ENST00000578187 SNRKQ9NRH2 765 aa15.58■□□□□ 0.08
CCDC57-211ENST00000578187 TLR2O60603 784 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 IGSF3O75054 1194 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 CYP2E1P05181 493 aaPredicted RBP15.57■□□□□ 0.08
CCDC57-211ENST00000578187 LDHCP07864 332 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 INPP5BP32019 993 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 ZAP70P43403 619 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 RGS3P49796 1198 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 MECOMQ03112 1051 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 NOL9Q5SY16 702 aaKnown RBP15.57■□□□□ 0.08
CCDC57-211ENST00000578187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.57■□□□□ 0.08
CCDC57-211ENST00000578187 NSUN4Q96CB9 384 aaKnown RBP15.57■□□□□ 0.08
CCDC57-211ENST00000578187 FAM163AQ96GL9 167 aaPredicted RBP15.57■□□□□ 0.08
CCDC57-211ENST00000578187 FAM198AQ9UFP1 575 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 ZNF112Q9UJU3 913 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 MROH7-TTC4A0A0A0MT08 1334 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 RFX7Q2KHR2 1363 aa15.57■□□□□ 0.08
CCDC57-211ENST00000578187 BTBD19C9JJ37 291 aa15.56■□□□□ 0.08
CCDC57-211ENST00000578187 SMARCA5O60264 1052 aaPredicted RBP15.56■□□□□ 0.08
CCDC57-211ENST00000578187 GNRH1P01148 92 aa15.56■□□□□ 0.08
CCDC57-211ENST00000578187 BTDP43251 543 aa15.56■□□□□ 0.08
CCDC57-211ENST00000578187 NOL10Q9BSC4 688 aaKnown RBP15.56■□□□□ 0.08
CCDC57-211ENST00000578187 MAP4K4O95819 1239 aaPredicted RBP15.55■□□□□ 0.08
CCDC57-211ENST00000578187 PICALMQ13492 652 aa15.55■□□□□ 0.08
CCDC57-211ENST00000578187 SLC9C1Q4G0N8 1177 aa15.55■□□□□ 0.08
CCDC57-211ENST00000578187 ANKRD23Q86SG2 305 aa15.55■□□□□ 0.08
CCDC57-211ENST00000578187 TMEM106CQ9BVX2 250 aa15.55■□□□□ 0.08
CCDC57-211ENST00000578187 PIH1D3Q9NQM4 214 aaKnown RBP15.55■□□□□ 0.08
CCDC57-211ENST00000578187 LRP2BPQ9P2M1 347 aa15.55■□□□□ 0.08
CCDC57-211ENST00000578187 TNRC18O15417 2968 aaPredicted RBP15.54■□□□□ 0.08
CCDC57-211ENST00000578187 SCYL3Q8IZE3 742 aa15.54■□□□□ 0.08
CCDC57-211ENST00000578187 ARMC5Q96C12 935 aa15.54■□□□□ 0.08
CCDC57-211ENST00000578187 RAI14Q9P0K7 980 aa15.54■□□□□ 0.08
CCDC57-211ENST00000578187 KCNH4Q9UQ05 1017 aa15.54■□□□□ 0.08
CCDC57-211ENST00000578187 NDUFB9Q9Y6M9 179 aa15.54■□□□□ 0.08
CCDC57-211ENST00000578187 GPR75-ASB3A0A0A6YYF3 556 aa15.53■□□□□ 0.08
CCDC57-211ENST00000578187 PDHXO00330 501 aa15.53■□□□□ 0.08
CCDC57-211ENST00000578187 CXCL11O14625 94 aa15.53■□□□□ 0.08
CCDC57-211ENST00000578187 ATP5JP18859 108 aa15.53■□□□□ 0.08
CCDC57-211ENST00000578187 PRMT2P55345 433 aa15.53■□□□□ 0.08
CCDC57-211ENST00000578187 LACTBP83111 547 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms