RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 POLA2Q14181 598 aa18.39■□□□□ 0.53
RN7SL560P-201ENST00000577943 TBC1D9Q6ZT07 1266 aa18.39■□□□□ 0.53
RN7SL560P-201ENST00000577943 C1orf115Q9H7X2 142 aa18.39■□□□□ 0.53
RN7SL560P-201ENST00000577943 DDX4Q9NQI0 724 aaKnown RBP18.39■□□□□ 0.53
RN7SL560P-201ENST00000577943 RAI14Q9P0K7 980 aa18.39■□□□□ 0.53
RN7SL560P-201ENST00000577943 KCNH4Q9UQ05 1017 aa18.39■□□□□ 0.53
RN7SL560P-201ENST00000577943 RBBP6Q7Z6E9 1792 aaKnown RBP18.39■□□□□ 0.53
RN7SL560P-201ENST00000577943 GPR75-ASB3A0A0A6YYF3 556 aa18.38■□□□□ 0.53
RN7SL560P-201ENST00000577943 DDTLA6NHG4 134 aaPredicted RBP18.38■□□□□ 0.53
RN7SL560P-201ENST00000577943 LDHCP07864 332 aa18.38■□□□□ 0.53
RN7SL560P-201ENST00000577943 UQCRFS1P1P0C7P4 283 aa18.38■□□□□ 0.53
RN7SL560P-201ENST00000577943 MCAMP43121 646 aa18.38■□□□□ 0.53
RN7SL560P-201ENST00000577943 GSTO1P78417 241 aa18.38■□□□□ 0.53
RN7SL560P-201ENST00000577943 KIF22Q14807 665 aa18.38■□□□□ 0.53
RN7SL560P-201ENST00000577943 SSH3Q8TE77 659 aa18.38■□□□□ 0.53
RN7SL560P-201ENST00000577943 RFX7Q2KHR2 1363 aa18.38■□□□□ 0.53
RN7SL560P-201ENST00000577943 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 PHF20L1A8MW92 1017 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 TNNI3KQ59H18 835 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 SH3BP5LQ7L8J4 393 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 ANKRD23Q86SG2 305 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 ZNF384Q8TF68 577 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 NSUN4Q96CB9 384 aaKnown RBP18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 PICK1Q9NRD5 415 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 LRP2BPQ9P2M1 347 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 FPGT-TNNI3KV9GXZ4 949 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 ATRNL1Q5VV63 1379 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 ATAD5Q96QE3 1844 aa18.37■□□□□ 0.53
RN7SL560P-201ENST00000577943 PDHXO00330 501 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 MGAMO43451 1857 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 RLBP1P12271 317 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 MKI67P46013 3256 aaKnown RBP18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 BRCA2P51587 3418 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 RHBDL3P58872 404 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 CCDC158Q5M9N0 1113 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 TTC39AQ5SRH9 613 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 SCYL3Q8IZE3 742 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 CDK5RAP2Q96SN8 1893 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 GPR108Q9NPR9 543 aa18.36■□□□□ 0.53
RN7SL560P-201ENST00000577943 MAST2Q6P0Q8 1798 aa18.35■□□□□ 0.53
RN7SL560P-201ENST00000577943 ZBED9Q6R2W3 1325 aa18.35■□□□□ 0.53
RN7SL560P-201ENST00000577943 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
RN7SL560P-201ENST00000577943 LACTBP83111 547 aaPredicted RBP18.35■□□□□ 0.53
RN7SL560P-201ENST00000577943 ARHGAP39Q9C0H5 1083 aa18.35■□□□□ 0.53
RN7SL560P-201ENST00000577943 CPA4Q9UI42 421 aa18.35■□□□□ 0.53
RN7SL560P-201ENST00000577943 PTCH2Q9Y6C5 1203 aa18.35■□□□□ 0.53
RN7SL560P-201ENST00000577943 POTEFA5A3E0 1075 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 CXCL11O14625 94 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 MAP4K4O95819 1239 aaPredicted RBP18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 PTPRAP18433 802 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 MAP3K10Q02779 954 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 SLC9C1Q4G0N8 1177 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 NBPF11Q86T75 865 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 ARMC5Q96C12 935 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 DBNDD2Q9BQY9 259 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 NOL10Q9BSC4 688 aaKnown RBP18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 SNRKQ9NRH2 765 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 ZHX2Q9Y6X8 837 aa18.34■□□□□ 0.53
RN7SL560P-201ENST00000577943 FOCADQ5VW36 1801 aa18.33■□□□□ 0.53
RN7SL560P-201ENST00000577943 CTNND1O60716 968 aaKnown RBP18.33■□□□□ 0.52
RN7SL560P-201ENST00000577943 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
RN7SL560P-201ENST00000577943 ECM2O94769 699 aaPredicted RBP18.33■□□□□ 0.52
RN7SL560P-201ENST00000577943 SLURP2P0DP57 97 aa18.33■□□□□ 0.52
RN7SL560P-201ENST00000577943 MOGSQ13724 837 aa18.33■□□□□ 0.52
RN7SL560P-201ENST00000577943 C17orf99Q6UX52 265 aa18.33■□□□□ 0.52
RN7SL560P-201ENST00000577943 GNRH1P01148 92 aa18.32■□□□□ 0.52
RN7SL560P-201ENST00000577943 NAA16Q6N069 864 aaPredicted RBP18.32■□□□□ 0.52
RN7SL560P-201ENST00000577943 FASTKD5Q7L8L6 764 aaKnown RBP18.32■□□□□ 0.52
RN7SL560P-201ENST00000577943 TEX11Q8IYF3 940 aa18.32■□□□□ 0.52
RN7SL560P-201ENST00000577943 PARK7Q99497 189 aaKnown RBP18.32■□□□□ 0.52
RN7SL560P-201ENST00000577943 TMEM106CQ9BVX2 250 aa18.32■□□□□ 0.52
RN7SL560P-201ENST00000577943 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.32■□□□□ 0.52
RN7SL560P-201ENST00000577943 NOP58Q9Y2X3 529 aaKnown RBP18.32■□□□□ 0.52
RN7SL560P-201ENST00000577943 AFG3L2Q9Y4W6 797 aa18.32■□□□□ 0.52
RN7SL560P-201ENST00000577943 A0A0G2JLL6 359 aaPredicted RBP18.31■□□□□ 0.52
RN7SL560P-201ENST00000577943 TBC1D12O60347 775 aa18.31■□□□□ 0.52
RN7SL560P-201ENST00000577943 GADL1Q6ZQY3 521 aa18.31■□□□□ 0.52
RN7SL560P-201ENST00000577943 PRRT2Q7Z6L0 340 aaPredicted RBP18.31■□□□□ 0.52
RN7SL560P-201ENST00000577943 ZNF333Q96JL9 665 aa18.31■□□□□ 0.52
RN7SL560P-201ENST00000577943 OSBPL5Q9H0X9 879 aaPredicted RBP18.31■□□□□ 0.52
RN7SL560P-201ENST00000577943 DOCK3Q8IZD9 2030 aa18.31■□□□□ 0.52
RN7SL560P-201ENST00000577943 MYH1P12882 1939 aa18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 FAM196BA6NMK8 535 aa18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 BAG3O95817 575 aa18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 PSMC4P43686 418 aa18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 PRPF38BQ5VTL8 546 aaKnown RBP18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 GPAT2Q6NUI2 795 aa18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 SH3RF3Q8TEJ3 882 aaPredicted RBP18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 CCDC8Q9H0W5 538 aaPredicted RBP18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 AATFQ9NY61 560 aaKnown RBP eCLIP18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 COL2A1P02458 1487 aaPredicted RBP18.3■□□□□ 0.52
RN7SL560P-201ENST00000577943 ADGRA2Q96PE1 1338 aa18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 TRIM75PA6NK02 468 aa18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 CYP2E1P05181 493 aaPredicted RBP18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 CYP2C8P10632 490 aa18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 PLCG2P16885 1265 aa18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 HOXD10P28358 340 aa18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 ZAP70P43403 619 aa18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 PRMT2P55345 433 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms