RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 GOLIM4O00461 696 aa28.55■■■□□ 2.16
SNF8-217ENST00000576353 HSPA8P11142 646 aaKnown RBP28.55■■■□□ 2.16
SNF8-217ENST00000576353 SREBF2Q12772 1141 aa28.55■■■□□ 2.16
SNF8-217ENST00000576353 ADGRA1Q86SQ6 560 aa28.55■■■□□ 2.16
SNF8-217ENST00000576353 CERS3Q8IU89 383 aa28.55■■■□□ 2.16
SNF8-217ENST00000576353 SH3RF3Q8TEJ3 882 aaPredicted RBP28.55■■■□□ 2.16
SNF8-217ENST00000576353 GPATCH3Q96I76 525 aa28.55■■■□□ 2.16
SNF8-217ENST00000576353 WRNIP1Q96S55 665 aa28.55■■■□□ 2.16
SNF8-217ENST00000576353 PRDM10Q9NQV6 1147 aa28.55■■■□□ 2.16
SNF8-217ENST00000576353 LBX1P52954 281 aa28.54■■■□□ 2.16
SNF8-217ENST00000576353 VGLL4Q14135 290 aa28.54■■■□□ 2.16
SNF8-217ENST00000576353 HAUS7Q99871 368 aa28.54■■■□□ 2.16
SNF8-217ENST00000576353 ELP3Q9H9T3 547 aa28.54■■■□□ 2.16
SNF8-217ENST00000576353 ECHDC1Q9NTX5 307 aa28.54■■■□□ 2.16
SNF8-217ENST00000576353 PAG1Q9NWQ8 432 aa28.54■■■□□ 2.16
SNF8-217ENST00000576353 SAGE1Q9NXZ1 904 aa28.54■■■□□ 2.16
SNF8-217ENST00000576353 TM4SF4P48230 202 aa28.53■■■□□ 2.16
SNF8-217ENST00000576353 INHBEP58166 350 aa28.53■■■□□ 2.16
SNF8-217ENST00000576353 SH3BP5LQ7L8J4 393 aa28.53■■■□□ 2.16
SNF8-217ENST00000576353 ZBTB47Q9UFB7 747 aaPredicted RBP28.53■■■□□ 2.16
SNF8-217ENST00000576353 DDTLA6NHG4 134 aaPredicted RBP28.52■■■□□ 2.16
SNF8-217ENST00000576353 MANSC4A6NHS7 340 aaPredicted RBP28.52■■■□□ 2.16
SNF8-217ENST00000576353 EXOC6Q8TAG9 804 aa28.52■■■□□ 2.16
SNF8-217ENST00000576353 GCC1Q96CN9 775 aa28.52■■■□□ 2.16
SNF8-217ENST00000576353 RNF186Q9NXI6 227 aa28.52■■■□□ 2.16
SNF8-217ENST00000576353 ZNF112Q9UJU3 913 aa28.52■■■□□ 2.16
SNF8-217ENST00000576353 SLC9C2Q5TAH2 1124 aa28.51■■■□□ 2.15
SNF8-217ENST00000576353 OPTNQ96CV9 577 aa28.51■■■□□ 2.15
SNF8-217ENST00000576353 ATRNL1Q5VV63 1379 aa28.5■■■□□ 2.15
SNF8-217ENST00000576353 MAST2Q6P0Q8 1798 aa28.5■■■□□ 2.15
SNF8-217ENST00000576353 ZKSCAN4Q969J2 545 aaPredicted RBP28.5■■■□□ 2.15
SNF8-217ENST00000576353 OSBPL5Q9H0X9 879 aaPredicted RBP28.5■■■□□ 2.15
SNF8-217ENST00000576353 RWDD1Q9H446 243 aaPredicted RBP28.5■■■□□ 2.15
SNF8-217ENST00000576353 TRPA1O75762 1119 aa28.49■■■□□ 2.15
SNF8-217ENST00000576353 PDE6AP16499 860 aa28.49■■■□□ 2.15
SNF8-217ENST00000576353 MAP3K10Q02779 954 aa28.49■■■□□ 2.15
SNF8-217ENST00000576353 COL13A1Q5TAT6 717 aaPredicted RBP28.49■■■□□ 2.15
SNF8-217ENST00000576353 MIGA1Q8NAN2 632 aa28.49■■■□□ 2.15
SNF8-217ENST00000576353 TGFBRAP1Q8WUH2 860 aa28.49■■■□□ 2.15
SNF8-217ENST00000576353 EDC3Q96F86 508 aaKnown RBP28.49■■■□□ 2.15
SNF8-217ENST00000576353 TSKSQ9UJT2 592 aa28.49■■■□□ 2.15
SNF8-217ENST00000576353 SNCAIPQ9Y6H5 919 aa28.49■■■□□ 2.15
SNF8-217ENST00000576353 DYNLL1P63167 89 aaKnown RBP28.48■■■□□ 2.15
SNF8-217ENST00000576353 ERO1BQ86YB8 467 aa28.48■■■□□ 2.15
SNF8-217ENST00000576353 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.48■■■□□ 2.15
SNF8-217ENST00000576353 DHX36Q9H2U1 1008 aaKnown RBP28.48■■■□□ 2.15
SNF8-217ENST00000576353 COL2A1P02458 1487 aaPredicted RBP28.47■■■□□ 2.15
SNF8-217ENST00000576353 SPDYE5A6NIY4 337 aa28.47■■■□□ 2.15
SNF8-217ENST00000576353 TBC1D12O60347 775 aa28.47■■■□□ 2.15
SNF8-217ENST00000576353 INPP5BP32019 993 aa28.47■■■□□ 2.15
SNF8-217ENST00000576353 GJA5P36382 358 aa28.47■■■□□ 2.15
SNF8-217ENST00000576353 ANKRD45Q5TZF3 282 aa28.47■■■□□ 2.15
SNF8-217ENST00000576353 MAPKAPK5Q8IW41 473 aa28.46■■■□□ 2.15
SNF8-217ENST00000576353 OTUD5Q96G74 571 aa28.46■■■□□ 2.15
SNF8-217ENST00000576353 TTC41PQ6P2S7 1318 aa28.45■■■□□ 2.15
SNF8-217ENST00000576353 ZNF532Q9HCE3 1301 aa28.45■■■□□ 2.15
SNF8-217ENST00000576353 ALDH1A1P00352 501 aa28.45■■■□□ 2.14
SNF8-217ENST00000576353 NOL9Q5SY16 702 aaKnown RBP28.45■■■□□ 2.14
SNF8-217ENST00000576353 CNKSR2Q8WXI2 1034 aa28.45■■■□□ 2.14
SNF8-217ENST00000576353 FLT1P17948 1338 aa28.44■■■□□ 2.14
SNF8-217ENST00000576353 MAGEB6P1A0A0J9YX57 407 aa28.44■■■□□ 2.14
SNF8-217ENST00000576353 PHF20L1A8MW92 1017 aa28.44■■■□□ 2.14
SNF8-217ENST00000576353 ERC2O15083 957 aa28.44■■■□□ 2.14
SNF8-217ENST00000576353 GTF2A2P52657 109 aa28.44■■■□□ 2.14
SNF8-217ENST00000576353 ZSCAN25Q6NSZ9 544 aa28.44■■■□□ 2.14
SNF8-217ENST00000576353 PI4KBQ9UBF8 816 aa28.44■■■□□ 2.14
SNF8-217ENST00000576353 AK9Q5TCS8 1911 aa28.43■■■□□ 2.14
SNF8-217ENST00000576353 TCRBV5S4A2TA0A5A2 114 aa28.43■■■□□ 2.14
SNF8-217ENST00000576353 USP5P45974 858 aa28.43■■■□□ 2.14
SNF8-217ENST00000576353 PPATQ06203 517 aa28.43■■■□□ 2.14
SNF8-217ENST00000576353 OTUD7BQ6GQQ9 843 aa28.43■■■□□ 2.14
SNF8-217ENST00000576353 RIOK1Q9BRS2 568 aaKnown RBP28.43■■■□□ 2.14
SNF8-217ENST00000576353 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.43■■■□□ 2.14
SNF8-217ENST00000576353 TESPA1A2RU30 521 aaPredicted RBP28.42■■■□□ 2.14
SNF8-217ENST00000576353 ADD2P35612 726 aa28.42■■■□□ 2.14
SNF8-217ENST00000576353 PPIL2Q13356 520 aa28.42■■■□□ 2.14
SNF8-217ENST00000576353 IFNL1Q8IU54 200 aa28.42■■■□□ 2.14
SNF8-217ENST00000576353 HERC5Q9UII4 1024 aaKnown RBP28.42■■■□□ 2.14
SNF8-217ENST00000576353 MYO5AQ9Y4I1 1855 aaKnown RBP28.42■■■□□ 2.14
SNF8-217ENST00000576353 DOCK2Q92608 1830 aa28.41■■■□□ 2.14
SNF8-217ENST00000576353 OTOFQ9HC10 1997 aa28.41■■■□□ 2.14
SNF8-217ENST00000576353 CTNND1O60716 968 aaKnown RBP28.41■■■□□ 2.14
SNF8-217ENST00000576353 TSHZ3Q63HK5 1081 aa28.41■■■□□ 2.14
SNF8-217ENST00000576353 MS4A4AQ96JQ5 239 aa28.41■■■□□ 2.14
SNF8-217ENST00000576353 PICK1Q9NRD5 415 aa28.41■■■□□ 2.14
SNF8-217ENST00000576353 GLRX3O76003 335 aaKnown RBP28.4■■■□□ 2.14
SNF8-217ENST00000576353 MX1P20591 662 aa28.4■■■□□ 2.14
SNF8-217ENST00000576353 UBE3CQ15386 1083 aa28.4■■■□□ 2.14
SNF8-217ENST00000576353 FOXP4Q8IVH2 680 aaPredicted RBP28.4■■■□□ 2.14
SNF8-217ENST00000576353 SCYL3Q8IZE3 742 aa28.4■■■□□ 2.14
SNF8-217ENST00000576353 CRNKL1Q9BZJ0 848 aaKnown RBP28.4■■■□□ 2.14
SNF8-217ENST00000576353 PALD1Q9ULE6 856 aa28.4■■■□□ 2.14
SNF8-217ENST00000576353 IRF6O14896 467 aa28.39■■■□□ 2.14
SNF8-217ENST00000576353 HLA-DOAP06340 250 aa28.39■■■□□ 2.14
SNF8-217ENST00000576353 SNAPC2Q13487 334 aa28.39■■■□□ 2.14
SNF8-217ENST00000576353 SMC5Q8IY18 1101 aa28.39■■■□□ 2.14
SNF8-217ENST00000576353 OTUD7AQ8TE49 926 aaPredicted RBP28.39■■■□□ 2.14
SNF8-217ENST00000576353 CCL15-CCL14A0A0B4J2E2 113 aa28.38■■■□□ 2.13
SNF8-217ENST00000576353 IGF2BP3O00425 579 aaKnown RBP eCLIP28.38■■■□□ 2.13
SNF8-217ENST00000576353 SLURP2P0DP57 97 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms