RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 MCOLN1Q9GZU1 580 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 STK24Q9Y6E0 443 aa12.31□□□□□ -0.44
RPA1-206ENST00000573994 STK25O00506 426 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 TCP10Q12799 353 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 DGKZQ13574 1117 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 VGLL4Q14135 290 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 TNNI3KQ59H18 835 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 ANKRD13AQ8IZ07 590 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 ZGPATQ8N5A5 531 aaKnown RBP12.3□□□□□ -0.44
RPA1-206ENST00000573994 DBNDD2Q9BQY9 259 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 HMG20BQ9P0W2 317 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 FPGT-TNNI3KV9GXZ4 949 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 OTOFQ9HC10 1997 aa12.3□□□□□ -0.44
RPA1-206ENST00000573994 PDS5AQ29RF7 1337 aaKnown RBP12.3□□□□□ -0.44
RPA1-206ENST00000573994 RPAP1Q9BWH6 1393 aaPredicted RBP12.3□□□□□ -0.44
RPA1-206ENST00000573994 ZBTB48P10074 688 aaPredicted RBP12.29□□□□□ -0.44
RPA1-206ENST00000573994 ARID4AP29374 1257 aaPredicted RBP12.29□□□□□ -0.44
RPA1-206ENST00000573994 MCAMP43121 646 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 FKBP1CQ5VVH2 108 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.29□□□□□ -0.44
RPA1-206ENST00000573994 TBC1D9Q6ZT07 1266 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 FAM83AQ86UY5 434 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 SPATA5Q8NB90 893 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.29□□□□□ -0.44
RPA1-206ENST00000573994 OPTNQ96CV9 577 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 WRNIP1Q96S55 665 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 USP40Q9NVE5 1235 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 TLR7Q9NYK1 1049 aaKnown RBP12.29□□□□□ -0.44
RPA1-206ENST00000573994 COG6Q9Y2V7 657 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 GAKO14976 1311 aa12.29□□□□□ -0.44
RPA1-206ENST00000573994 MANSC4A6NHS7 340 aaPredicted RBP12.28□□□□□ -0.44
RPA1-206ENST00000573994 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
RPA1-206ENST00000573994 MS4A1P11836 297 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 BTDP43251 543 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 TM4SF4P48230 202 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 MECOMQ03112 1051 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 TTC39AQ5SRH9 613 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 MIGA2Q7L4E1 593 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 ZFPM1Q8IX07 1006 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 ZNF384Q8TF68 577 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 R3HDMLQ9H3Y0 253 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 SNRKQ9NRH2 765 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 FAM198AQ9UFP1 575 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 EXOC6BQ9Y2D4 811 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 CSADQ9Y600 493 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 SNCAIPQ9Y6H5 919 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 MROH7-TTC4A0A0A0MT08 1334 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 RFX7Q2KHR2 1363 aa12.28□□□□□ -0.44
RPA1-206ENST00000573994 CASP8AP2Q9UKL3 1982 aa12.27□□□□□ -0.44
RPA1-206ENST00000573994 UQCRFS1P1P0C7P4 283 aa12.27□□□□□ -0.45
RPA1-206ENST00000573994 RGS3P49796 1198 aa12.27□□□□□ -0.45
RPA1-206ENST00000573994 PICALMQ13492 652 aa12.27□□□□□ -0.45
RPA1-206ENST00000573994 SPTY2D1Q68D10 685 aaPredicted RBP12.27□□□□□ -0.45
RPA1-206ENST00000573994 ERICH6Q7L0X2 663 aa12.27□□□□□ -0.45
RPA1-206ENST00000573994 ZNF296Q8WUU4 475 aaPredicted RBP12.27□□□□□ -0.45
RPA1-206ENST00000573994 FAM151AQ8WW52 585 aa12.27□□□□□ -0.45
RPA1-206ENST00000573994 ZKSCAN4Q969J2 545 aaPredicted RBP12.27□□□□□ -0.45
RPA1-206ENST00000573994 RAI14Q9P0K7 980 aa12.27□□□□□ -0.45
RPA1-206ENST00000573994 DBNLQ9UJU6 430 aaKnown RBP12.27□□□□□ -0.45
RPA1-206ENST00000573994 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.45
RPA1-206ENST00000573994 CCDC85CA6NKD9 419 aa12.26□□□□□ -0.45
RPA1-206ENST00000573994 APBB1O00213 710 aa12.26□□□□□ -0.45
RPA1-206ENST00000573994 INPP5BP32019 993 aa12.26□□□□□ -0.45
RPA1-206ENST00000573994 C20orf194Q5TEA3 1177 aa12.26□□□□□ -0.45
RPA1-206ENST00000573994 DCAF15Q66K64 600 aa12.26□□□□□ -0.45
RPA1-206ENST00000573994 ZNF341Q9BYN7 854 aa12.26□□□□□ -0.45
RPA1-206ENST00000573994 CCDC8Q9H0W5 538 aaPredicted RBP12.26□□□□□ -0.45
RPA1-206ENST00000573994 GPR108Q9NPR9 543 aa12.26□□□□□ -0.45
RPA1-206ENST00000573994 DDX4Q9NQI0 724 aaKnown RBP12.26□□□□□ -0.45
RPA1-206ENST00000573994 AKAP11Q9UKA4 1901 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 CCL15-CCL14A0A0B4J2E2 113 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 GPR25O00155 361 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 WDHD1O75717 1129 aaPredicted RBP12.25□□□□□ -0.45
RPA1-206ENST00000573994 SLURP2P0DP57 97 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 INHBEP58166 350 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 CCL15Q16663 113 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 CTU1Q7Z7A3 348 aaKnown RBP12.25□□□□□ -0.45
RPA1-206ENST00000573994 ZSCAN29Q8IWY8 852 aaPredicted RBP12.25□□□□□ -0.45
RPA1-206ENST00000573994 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 BRI3BPQ8WY22 251 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 NSUN4Q96CB9 384 aaKnown RBP12.25□□□□□ -0.45
RPA1-206ENST00000573994 EAF2Q96CJ1 260 aaPredicted RBP12.25□□□□□ -0.45
RPA1-206ENST00000573994 HOOK2Q96ED9 719 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 BCL11AQ9H165 835 aa12.25□□□□□ -0.45
RPA1-206ENST00000573994 SPDYE5A6NIY4 337 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 ZAP70P43403 619 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 RHBDL3P58872 404 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 CRHR2Q13324 411 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 ATRNL1Q5VV63 1379 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 AACSQ86V21 672 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 PTPN18Q99952 460 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 IDI2Q9BXS1 227 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 IL1RAPL2Q9NP60 686 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 PIH1D3Q9NQM4 214 aaKnown RBP12.24□□□□□ -0.45
RPA1-206ENST00000573994 LRP2BPQ9P2M1 347 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms