RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 CYP7A1P22680 504 aa33.8■■■■□ 3
SCARF1-207ENST00000573867 MAGEB6Q8N7X4 407 aa33.8■■■■□ 3
SCARF1-207ENST00000573867 WRNIP1Q96S55 665 aa33.8■■■■□ 3
SCARF1-207ENST00000573867 MAP4K4O95819 1239 aaPredicted RBP33.79■■■■□ 3
SCARF1-207ENST00000573867 DYNLL1P63167 89 aaKnown RBP33.79■■■■□ 3
SCARF1-207ENST00000573867 DCAF15Q66K64 600 aa33.79■■■■□ 3
SCARF1-207ENST00000573867 TEX11Q8IYF3 940 aa33.79■■■■□ 3
SCARF1-207ENST00000573867 HOOK2Q96ED9 719 aa33.79■■■■□ 3
SCARF1-207ENST00000573867 NPM3O75607 178 aaKnown RBP33.78■■■■□ 3
SCARF1-207ENST00000573867 ZKSCAN4Q969J2 545 aaPredicted RBP33.78■■■■□ 3
SCARF1-207ENST00000573867 ZNF341Q9BYN7 854 aa33.78■■■■□ 3
SCARF1-207ENST00000573867 RNF186Q9NXI6 227 aa33.78■■■■□ 3
SCARF1-207ENST00000573867 SNCAIPQ9Y6H5 919 aa33.78■■■■□ 3
SCARF1-207ENST00000573867 INPP5BP32019 993 aa33.77■■■■□ 3
SCARF1-207ENST00000573867 HAUS7Q99871 368 aa33.77■■■■□ 3
SCARF1-207ENST00000573867 PRDM10Q9NQV6 1147 aa33.77■■■■□ 3
SCARF1-207ENST00000573867 CA12O43570 354 aa33.76■■■□□ 2.99
SCARF1-207ENST00000573867 ZBTB48P10074 688 aaPredicted RBP33.76■■■□□ 2.99
SCARF1-207ENST00000573867 TM4SF4P48230 202 aa33.76■■■□□ 2.99
SCARF1-207ENST00000573867 MAP3K12Q12852 859 aa33.76■■■□□ 2.99
SCARF1-207ENST00000573867 ZSCAN29Q8IWY8 852 aaPredicted RBP33.76■■■□□ 2.99
SCARF1-207ENST00000573867 MIGA1Q8NAN2 632 aa33.76■■■□□ 2.99
SCARF1-207ENST00000573867 OPTNQ96CV9 577 aa33.76■■■□□ 2.99
SCARF1-207ENST00000573867 NOL10Q9BSC4 688 aaKnown RBP33.76■■■□□ 2.99
SCARF1-207ENST00000573867 OSBPL5Q9H0X9 879 aaPredicted RBP33.76■■■□□ 2.99
SCARF1-207ENST00000573867 ZNF112Q9UJU3 913 aa33.76■■■□□ 2.99
SCARF1-207ENST00000573867 LAMB1P07942 1786 aa33.75■■■□□ 2.99
SCARF1-207ENST00000573867 AK9Q5TCS8 1911 aa33.75■■■□□ 2.99
SCARF1-207ENST00000573867 BAG3O95817 575 aa33.75■■■□□ 2.99
SCARF1-207ENST00000573867 HDAC1Q13547 482 aaPredicted RBP33.75■■■□□ 2.99
SCARF1-207ENST00000573867 TTF1Q15361 905 aaPredicted RBP33.75■■■□□ 2.99
SCARF1-207ENST00000573867 TSHZ3Q63HK5 1081 aa33.75■■■□□ 2.99
SCARF1-207ENST00000573867 REM2Q8IYK8 340 aaPredicted RBP33.75■■■□□ 2.99
SCARF1-207ENST00000573867 PAG1Q9NWQ8 432 aa33.75■■■□□ 2.99
SCARF1-207ENST00000573867 CSADQ9Y600 493 aa33.75■■■□□ 2.99
SCARF1-207ENST00000573867 TRPA1O75762 1119 aa33.74■■■□□ 2.99
SCARF1-207ENST00000573867 COL2A1P02458 1487 aaPredicted RBP33.74■■■□□ 2.99
SCARF1-207ENST00000573867 CDK5RAP2Q96SN8 1893 aa33.73■■■□□ 2.99
SCARF1-207ENST00000573867 PDE6AP16499 860 aa33.73■■■□□ 2.99
SCARF1-207ENST00000573867 MAP3K10Q02779 954 aa33.73■■■□□ 2.99
SCARF1-207ENST00000573867 OTUD7AQ8TE49 926 aaPredicted RBP33.73■■■□□ 2.99
SCARF1-207ENST00000573867 ECHDC1Q9NTX5 307 aa33.73■■■□□ 2.99
SCARF1-207ENST00000573867 SAGE1Q9NXZ1 904 aa33.73■■■□□ 2.99
SCARF1-207ENST00000573867 PLCG2P16885 1265 aa33.72■■■□□ 2.99
SCARF1-207ENST00000573867 TGFBRAP1Q8WUH2 860 aa33.72■■■□□ 2.99
SCARF1-207ENST00000573867 TCRBV5S4A2TA0A5A2 114 aa33.71■■■□□ 2.99
SCARF1-207ENST00000573867 SPDYE5A6NIY4 337 aa33.71■■■□□ 2.99
SCARF1-207ENST00000573867 PHF20L1A8MW92 1017 aa33.71■■■□□ 2.99
SCARF1-207ENST00000573867 AAMPQ13685 434 aa33.71■■■□□ 2.99
SCARF1-207ENST00000573867 SLFNL1Q499Z3 407 aa33.71■■■□□ 2.99
SCARF1-207ENST00000573867 SLC9C2Q5TAH2 1124 aa33.71■■■□□ 2.99
SCARF1-207ENST00000573867 MAPKAPK5Q8IW41 473 aa33.71■■■□□ 2.99
SCARF1-207ENST00000573867 FOCADQ5VW36 1801 aa33.7■■■□□ 2.99
SCARF1-207ENST00000573867 MANSC4A6NHS7 340 aaPredicted RBP33.7■■■□□ 2.99
SCARF1-207ENST00000573867 CHGBP05060 677 aa33.7■■■□□ 2.99
SCARF1-207ENST00000573867 SREBF2Q12772 1141 aa33.7■■■□□ 2.99
SCARF1-207ENST00000573867 OTUD5Q96G74 571 aa33.7■■■□□ 2.99
SCARF1-207ENST00000573867 FLT1P17948 1338 aa33.7■■■□□ 2.99
SCARF1-207ENST00000573867 FAM196BA6NMK8 535 aa33.69■■■□□ 2.98
SCARF1-207ENST00000573867 MS4A4AQ96JQ5 239 aa33.69■■■□□ 2.98
SCARF1-207ENST00000573867 RIOK1Q9BRS2 568 aaKnown RBP33.69■■■□□ 2.98
SCARF1-207ENST00000573867 ZNF532Q9HCE3 1301 aa33.69■■■□□ 2.98
SCARF1-207ENST00000573867 SIPA1L1O43166 1804 aa33.68■■■□□ 2.98
SCARF1-207ENST00000573867 TMED8Q6PL24 325 aaPredicted RBP33.68■■■□□ 2.98
SCARF1-207ENST00000573867 IGF2BP3O00425 579 aaKnown RBP eCLIP33.67■■■□□ 2.98
SCARF1-207ENST00000573867 IRX6P78412 446 aaPredicted RBP33.67■■■□□ 2.98
SCARF1-207ENST00000573867 NOL9Q5SY16 702 aaKnown RBP33.67■■■□□ 2.98
SCARF1-207ENST00000573867 ERO1BQ86YB8 467 aa33.67■■■□□ 2.98
SCARF1-207ENST00000573867 PTPN18Q99952 460 aa33.66■■■□□ 2.98
SCARF1-207ENST00000573867 SALL3Q9BXA9 1300 aa33.66■■■□□ 2.98
SCARF1-207ENST00000573867 TESPA1A2RU30 521 aaPredicted RBP33.65■■■□□ 2.98
SCARF1-207ENST00000573867 IGHDP01880 384 aa33.65■■■□□ 2.98
SCARF1-207ENST00000573867 ADD2P35612 726 aa33.65■■■□□ 2.98
SCARF1-207ENST00000573867 ANKRD45Q5TZF3 282 aa33.65■■■□□ 2.98
SCARF1-207ENST00000573867 IFNL1Q8IU54 200 aa33.65■■■□□ 2.98
SCARF1-207ENST00000573867 GCC1Q96CN9 775 aa33.65■■■□□ 2.98
SCARF1-207ENST00000573867 TBC1D12O60347 775 aa33.64■■■□□ 2.98
SCARF1-207ENST00000573867 TBC1D8O95759 1140 aa33.63■■■□□ 2.97
SCARF1-207ENST00000573867 INHBEP58166 350 aa33.63■■■□□ 2.97
SCARF1-207ENST00000573867 PI4K2BQ8TCG2 481 aa33.63■■■□□ 2.97
SCARF1-207ENST00000573867 BRI3BPQ8WY22 251 aa33.63■■■□□ 2.97
SCARF1-207ENST00000573867 GPATCH3Q96I76 525 aa33.63■■■□□ 2.97
SCARF1-207ENST00000573867 R3HDMLQ9H3Y0 253 aa33.63■■■□□ 2.97
SCARF1-207ENST00000573867 SAP30BPQ9UHR5 308 aaKnown RBP33.63■■■□□ 2.97
SCARF1-207ENST00000573867 MAGEB6P1A0A0J9YX57 407 aa33.62■■■□□ 2.97
SCARF1-207ENST00000573867 IRF6O14896 467 aa33.62■■■□□ 2.97
SCARF1-207ENST00000573867 PPIL2Q13356 520 aa33.62■■■□□ 2.97
SCARF1-207ENST00000573867 RRP1BQ14684 758 aaKnown RBP33.62■■■□□ 2.97
SCARF1-207ENST00000573867 PALD1Q9ULE6 856 aa33.62■■■□□ 2.97
SCARF1-207ENST00000573867 CERS3Q8IU89 383 aa33.61■■■□□ 2.97
SCARF1-207ENST00000573867 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.61■■■□□ 2.97
SCARF1-207ENST00000573867 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.61■■■□□ 2.97
SCARF1-207ENST00000573867 TTC41PQ6P2S7 1318 aa33.6■■■□□ 2.97
SCARF1-207ENST00000573867 PPATQ06203 517 aa33.6■■■□□ 2.97
SCARF1-207ENST00000573867 SLC4A8Q2Y0W8 1093 aa33.6■■■□□ 2.97
SCARF1-207ENST00000573867 SMC5Q8IY18 1101 aa33.6■■■□□ 2.97
SCARF1-207ENST00000573867 SCYL3Q8IZE3 742 aa33.6■■■□□ 2.97
SCARF1-207ENST00000573867 LCORLQ8N3X6 602 aa33.6■■■□□ 2.97
SCARF1-207ENST00000573867 DHX36Q9H2U1 1008 aaKnown RBP33.6■■■□□ 2.97
SCARF1-207ENST00000573867 DNAJC18Q9H819 358 aa33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms