RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 DDX4Q9NQI0 724 aaKnown RBP17.65■□□□□ 0.42
TVP23A-208ENST00000573857 PTCH2Q9Y6C5 1203 aa17.65■□□□□ 0.42
TVP23A-208ENST00000573857 PDHXO00330 501 aa17.64■□□□□ 0.41
TVP23A-208ENST00000573857 ARID4AP29374 1257 aaPredicted RBP17.64■□□□□ 0.41
TVP23A-208ENST00000573857 KIF22Q14807 665 aa17.64■□□□□ 0.41
TVP23A-208ENST00000573857 PI16Q6UXB8 463 aa17.64■□□□□ 0.41
TVP23A-208ENST00000573857 ARHGAP39Q9C0H5 1083 aa17.64■□□□□ 0.41
TVP23A-208ENST00000573857 AK9Q5TCS8 1911 aa17.64■□□□□ 0.41
TVP23A-208ENST00000573857 KIAA0100Q14667 2235 aaKnown RBP17.64■□□□□ 0.41
TVP23A-208ENST00000573857 GPR75-ASB3A0A0A6YYF3 556 aa17.63■□□□□ 0.41
TVP23A-208ENST00000573857 DDTLA6NHG4 134 aaPredicted RBP17.63■□□□□ 0.41
TVP23A-208ENST00000573857 RHBDL3P58872 404 aa17.63■□□□□ 0.41
TVP23A-208ENST00000573857 HNRNPUQ00839 825 aaKnown RBP eCLIP17.63■□□□□ 0.41
TVP23A-208ENST00000573857 MAP3K10Q02779 954 aa17.63■□□□□ 0.41
TVP23A-208ENST00000573857 PICALMQ13492 652 aa17.63■□□□□ 0.41
TVP23A-208ENST00000573857 SLC9C1Q4G0N8 1177 aa17.63■□□□□ 0.41
TVP23A-208ENST00000573857 C17orf99Q6UX52 265 aa17.63■□□□□ 0.41
TVP23A-208ENST00000573857 SCYL3Q8IZE3 742 aa17.63■□□□□ 0.41
TVP23A-208ENST00000573857 ZNF333Q96JL9 665 aa17.63■□□□□ 0.41
TVP23A-208ENST00000573857 CXCL11O14625 94 aa17.62■□□□□ 0.41
TVP23A-208ENST00000573857 POLA2Q14181 598 aa17.62■□□□□ 0.41
TVP23A-208ENST00000573857 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
TVP23A-208ENST00000573857 NBPF11Q86T75 865 aa17.62■□□□□ 0.41
TVP23A-208ENST00000573857 NSUN4Q96CB9 384 aaKnown RBP17.62■□□□□ 0.41
TVP23A-208ENST00000573857 PICK1Q9NRD5 415 aa17.62■□□□□ 0.41
TVP23A-208ENST00000573857 CPA4Q9UI42 421 aa17.62■□□□□ 0.41
TVP23A-208ENST00000573857 DOCK2Q92608 1830 aa17.62■□□□□ 0.41
TVP23A-208ENST00000573857 ADGRA2Q96PE1 1338 aa17.62■□□□□ 0.41
TVP23A-208ENST00000573857 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
TVP23A-208ENST00000573857 GNRH1P01148 92 aa17.61■□□□□ 0.41
TVP23A-208ENST00000573857 UQCRFS1P1P0C7P4 283 aa17.61■□□□□ 0.41
TVP23A-208ENST00000573857 PTPRAP18433 802 aa17.61■□□□□ 0.41
TVP23A-208ENST00000573857 MCAMP43121 646 aa17.61■□□□□ 0.41
TVP23A-208ENST00000573857 GSTO1P78417 241 aa17.61■□□□□ 0.41
TVP23A-208ENST00000573857 ZHX2Q9Y6X8 837 aa17.61■□□□□ 0.41
TVP23A-208ENST00000573857 A0A0G2JLL6 359 aaPredicted RBP17.6■□□□□ 0.41
TVP23A-208ENST00000573857 MAP4K4O95819 1239 aaPredicted RBP17.6■□□□□ 0.41
TVP23A-208ENST00000573857 LDHCP07864 332 aa17.6■□□□□ 0.41
TVP23A-208ENST00000573857 SLURP2P0DP57 97 aa17.6■□□□□ 0.41
TVP23A-208ENST00000573857 GPAT2Q6NUI2 795 aa17.6■□□□□ 0.41
TVP23A-208ENST00000573857 PRRT2Q7Z6L0 340 aaPredicted RBP17.6■□□□□ 0.41
TVP23A-208ENST00000573857 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
TVP23A-208ENST00000573857 SSH3Q8TE77 659 aa17.6■□□□□ 0.41
TVP23A-208ENST00000573857 PARK7Q99497 189 aaKnown RBP17.6■□□□□ 0.41
TVP23A-208ENST00000573857 GPR108Q9NPR9 543 aa17.6■□□□□ 0.41
TVP23A-208ENST00000573857 RAI14Q9P0K7 980 aa17.6■□□□□ 0.41
TVP23A-208ENST00000573857 RBBP6Q7Z6E9 1792 aaKnown RBP17.6■□□□□ 0.41
TVP23A-208ENST00000573857 ZSWIM8A7E2V4 1837 aa17.59■□□□□ 0.41
TVP23A-208ENST00000573857 CTNND1O60716 968 aaKnown RBP17.59■□□□□ 0.41
TVP23A-208ENST00000573857 EN2P19622 333 aaPredicted RBP17.59■□□□□ 0.41
TVP23A-208ENST00000573857 CTGFP29279 349 aa17.59■□□□□ 0.41
TVP23A-208ENST00000573857 PRMT2P55345 433 aa17.59■□□□□ 0.41
TVP23A-208ENST00000573857 ATP8B2P98198 1209 aa17.59■□□□□ 0.41
TVP23A-208ENST00000573857 TNNI3KQ59H18 835 aa17.59■□□□□ 0.41
TVP23A-208ENST00000573857 TMEM106CQ9BVX2 250 aa17.59■□□□□ 0.41
TVP23A-208ENST00000573857 C1orf115Q9H7X2 142 aa17.59■□□□□ 0.41
TVP23A-208ENST00000573857 AFG3L2Q9Y4W6 797 aa17.59■□□□□ 0.41
TVP23A-208ENST00000573857 FPGT-TNNI3KV9GXZ4 949 aa17.59■□□□□ 0.41
TVP23A-208ENST00000573857 COL2A1P02458 1487 aaPredicted RBP17.58■□□□□ 0.41
TVP23A-208ENST00000573857 TBC1D12O60347 775 aa17.58■□□□□ 0.4
TVP23A-208ENST00000573857 RLBP1P12271 317 aa17.58■□□□□ 0.4
TVP23A-208ENST00000573857 PSMC4P43686 418 aa17.58■□□□□ 0.4
TVP23A-208ENST00000573857 OS9Q13438 667 aaPredicted RBP17.58■□□□□ 0.4
TVP23A-208ENST00000573857 FASTKD5Q7L8L6 764 aaKnown RBP17.58■□□□□ 0.4
TVP23A-208ENST00000573857 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.4
TVP23A-208ENST00000573857 SH3TC2Q8TF17 1288 aa17.58■□□□□ 0.4
TVP23A-208ENST00000573857 TRIM47Q96LD4 638 aa17.58■□□□□ 0.4
TVP23A-208ENST00000573857 LRP2BPQ9P2M1 347 aa17.58■□□□□ 0.4
TVP23A-208ENST00000573857 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
TVP23A-208ENST00000573857 ECM2O94769 699 aaPredicted RBP17.57■□□□□ 0.4
TVP23A-208ENST00000573857 CYP2C8P10632 490 aa17.57■□□□□ 0.4
TVP23A-208ENST00000573857 TTC39AQ5SRH9 613 aa17.57■□□□□ 0.4
TVP23A-208ENST00000573857 DBNDD2Q9BQY9 259 aa17.57■□□□□ 0.4
TVP23A-208ENST00000573857 OSBPL5Q9H0X9 879 aaPredicted RBP17.57■□□□□ 0.4
TVP23A-208ENST00000573857 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.57■□□□□ 0.4
TVP23A-208ENST00000573857 ZBTB7BO15156 539 aaPredicted RBP17.56■□□□□ 0.4
TVP23A-208ENST00000573857 BCRP11274 1271 aa17.56■□□□□ 0.4
TVP23A-208ENST00000573857 OSBPP22059 807 aa17.56■□□□□ 0.4
TVP23A-208ENST00000573857 SLC4A8Q2Y0W8 1093 aa17.56■□□□□ 0.4
TVP23A-208ENST00000573857 CCDC158Q5M9N0 1113 aa17.56■□□□□ 0.4
TVP23A-208ENST00000573857 GADL1Q6ZQY3 521 aa17.56■□□□□ 0.4
TVP23A-208ENST00000573857 TEX11Q8IYF3 940 aa17.56■□□□□ 0.4
TVP23A-208ENST00000573857 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.56■□□□□ 0.4
TVP23A-208ENST00000573857 SNRKQ9NRH2 765 aa17.56■□□□□ 0.4
TVP23A-208ENST00000573857 SRRDQ9UH36 339 aa17.56■□□□□ 0.4
TVP23A-208ENST00000573857 SLC45A1Q9Y2W3 748 aa17.56■□□□□ 0.4
TVP23A-208ENST00000573857 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
TVP23A-208ENST00000573857 DOCK1Q14185 1865 aa17.55■□□□□ 0.4
TVP23A-208ENST00000573857 TRIM75PA6NK02 468 aa17.55■□□□□ 0.4
TVP23A-208ENST00000573857 FAM196BA6NMK8 535 aa17.55■□□□□ 0.4
TVP23A-208ENST00000573857 FMNL1O95466 1100 aaPredicted RBP17.55■□□□□ 0.4
TVP23A-208ENST00000573857 MYCP01106 439 aaPredicted RBP17.55■□□□□ 0.4
TVP23A-208ENST00000573857 HOXD10P28358 340 aa17.55■□□□□ 0.4
TVP23A-208ENST00000573857 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
TVP23A-208ENST00000573857 SH3RF3Q8TEJ3 882 aaPredicted RBP17.55■□□□□ 0.4
TVP23A-208ENST00000573857 CYP2E1P05181 493 aaPredicted RBP17.54■□□□□ 0.4
TVP23A-208ENST00000573857 NAA16Q6N069 864 aaPredicted RBP17.54■□□□□ 0.4
TVP23A-208ENST00000573857 ZNF512BQ96KM6 892 aaPredicted RBP17.54■□□□□ 0.4
TVP23A-208ENST00000573857 NOL10Q9BSC4 688 aaKnown RBP17.54■□□□□ 0.4
TVP23A-208ENST00000573857 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms