RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TMEM87BQ96K49 555 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 PRDM11Q9NQV5 511 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 WWC3Q9ULE0 1092 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 GOLGA8AA7E2F4 631 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 GPTP24298 496 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 CCDC102BQ68D86 513 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 OLFM4Q6UX06 510 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 REXO1L1PQ8IX06 675 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 CNNM3Q8NE01 707 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 ZNF512BQ96KM6 892 aaPredicted RBP21.95■■□□□ 1.1
SCARF1-206ENST00000573852 INTS13Q9NVM9 706 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 PHLPP2Q6ZVD8 1323 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 PDE6AP16499 860 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 TTF1Q15361 905 aaPredicted RBP21.94■■□□□ 1.1
SCARF1-206ENST00000573852 SPECC1Q5M775 1068 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 DNAJC10Q8IXB1 793 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 VGLL2Q8N8G2 317 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 CNNM1Q9NRU3 951 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 CCP110O43303 1012 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 TRIM29Q14134 588 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 HLFQ16534 295 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 TMEM67Q5HYA8 995 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 ST7Q9NRC1 585 aa21.94■■□□□ 1.1
SCARF1-206ENST00000573852 TCRBV5S4A2TA0A5A2 114 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 TOP1P11387 765 aaKnown RBP21.93■■□□□ 1.1
SCARF1-206ENST00000573852 IL2RBP14784 551 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 PHKA1P46020 1223 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 SLC26A6Q9BXS9 759 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 CLCN6P51797 869 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 MDM2Q00987 491 aaPredicted RBP21.93■■□□□ 1.1
SCARF1-206ENST00000573852 ARHGAP29Q52LW3 1261 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 HSP90AA4PQ58FG1 418 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 SGMS1Q86VZ5 419 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 STRBPQ96SI9 672 aaKnown RBP21.93■■□□□ 1.1
SCARF1-206ENST00000573852 TMEM139Q8IV31 216 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 TACC3Q9Y6A5 838 aa21.93■■□□□ 1.1
SCARF1-206ENST00000573852 STK11IPQ8N1F8 1099 aa21.92■■□□□ 1.1
SCARF1-206ENST00000573852 ZSWIM5Q9P217 1185 aa21.92■■□□□ 1.1
SCARF1-206ENST00000573852 DCCP43146 1447 aa21.92■■□□□ 1.1
SCARF1-206ENST00000573852 CTDSPL2Q05D32 466 aa21.92■■□□□ 1.1
SCARF1-206ENST00000573852 NLRP10Q86W26 655 aa21.92■■□□□ 1.1
SCARF1-206ENST00000573852 CDHR2Q9BYE9 1310 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 SHANK3Q9BYB0 1731 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 ANKRD18BA2A2Z9 1011 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 GUCY1A2P33402 732 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 TOB1P50616 345 aaPredicted RBP21.91■■□□□ 1.1
SCARF1-206ENST00000573852 CTSWP56202 376 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 GRIN1Q05586 938 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 SSRP1Q08945 709 aaKnown RBP21.91■■□□□ 1.1
SCARF1-206ENST00000573852 GIGYF2Q6Y7W6 1299 aaKnown RBP21.91■■□□□ 1.1
SCARF1-206ENST00000573852 KRI1Q8N9T8 703 aaKnown RBP21.91■■□□□ 1.1
SCARF1-206ENST00000573852 EPB41L4AQ9HCS5 686 aaPredicted RBP21.91■■□□□ 1.1
SCARF1-206ENST00000573852 ASAP1Q9ULH1 1129 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 STRCP1A6NGW2 1772 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 BTBD18B2RXH4 712 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 PDE8BO95263 885 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 CADPS2Q86UW7 1296 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 NOSTRINQ8IVI9 506 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 AIDAQ96BJ3 306 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 TMOD3Q9NYL9 352 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 FHOD1Q9Y613 1164 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 MAP3K15Q6ZN16 1313 aa21.91■■□□□ 1.1
SCARF1-206ENST00000573852 TBC1D2BQ9UPU7 963 aa21.9■■□□□ 1.1
SCARF1-206ENST00000573852 SLC12A7Q9Y666 1083 aa21.9■■□□□ 1.1
SCARF1-206ENST00000573852 IFIT3O14879 490 aaKnown RBP21.9■■□□□ 1.1
SCARF1-206ENST00000573852 MYO1BO43795 1136 aa21.9■■□□□ 1.1
SCARF1-206ENST00000573852 URI1O94763 535 aaPredicted RBP21.9■■□□□ 1.1
SCARF1-206ENST00000573852 LIFRP42702 1097 aa21.9■■□□□ 1.1
SCARF1-206ENST00000573852 BMS1Q14692 1282 aaKnown RBP21.9■■□□□ 1.1
SCARF1-206ENST00000573852 MAN1B1Q9UKM7 699 aa21.9■■□□□ 1.1
SCARF1-206ENST00000573852 COL5A2P05997 1499 aaPredicted RBP21.89■■□□□ 1.1
SCARF1-206ENST00000573852 VWA3AA6NCI4 1184 aa21.89■■□□□ 1.1
SCARF1-206ENST00000573852 FMNL1O95466 1100 aaPredicted RBP21.89■■□□□ 1.1
SCARF1-206ENST00000573852 ARID4AP29374 1257 aaPredicted RBP21.89■■□□□ 1.1
SCARF1-206ENST00000573852 ALX1Q15699 326 aa21.89■■□□□ 1.1
SCARF1-206ENST00000573852 KCNJ14Q9UNX9 436 aa21.89■■□□□ 1.1
SCARF1-206ENST00000573852 STK36Q9NRP7 1315 aa21.89■■□□□ 1.09
SCARF1-206ENST00000573852 TBX2Q13207 712 aaPredicted RBP21.89■■□□□ 1.09
SCARF1-206ENST00000573852 FCHSD1Q86WN1 690 aa21.89■■□□□ 1.09
SCARF1-206ENST00000573852 IFNL3Q8IZI9 196 aa21.89■■□□□ 1.09
SCARF1-206ENST00000573852 PPP2R2CQ9Y2T4 447 aa21.89■■□□□ 1.09
SCARF1-206ENST00000573852 PARP3Q9Y6F1 533 aa21.89■■□□□ 1.09
SCARF1-206ENST00000573852 TOGARAM1Q9Y4F4 1720 aa21.88■■□□□ 1.09
SCARF1-206ENST00000573852 PRR29P0C7W0 189 aa21.88■■□□□ 1.09
SCARF1-206ENST00000573852 FMR1Q06787 632 aaKnown RBP eCLIP21.88■■□□□ 1.09
SCARF1-206ENST00000573852 UBXN4Q92575 508 aa21.88■■□□□ 1.09
SCARF1-206ENST00000573852 IRS4O14654 1257 aaPredicted RBP21.88■■□□□ 1.09
SCARF1-206ENST00000573852 ARHGAP6O43182 974 aa21.88■■□□□ 1.09
SCARF1-206ENST00000573852 FAM177A1Q8N128 213 aaPredicted RBP21.88■■□□□ 1.09
SCARF1-206ENST00000573852 HELBQ8NG08 1087 aaPredicted RBP21.88■■□□□ 1.09
SCARF1-206ENST00000573852 CARD10Q9BWT7 1032 aa21.88■■□□□ 1.09
SCARF1-206ENST00000573852 CARD6Q9BX69 1037 aa21.88■■□□□ 1.09
SCARF1-206ENST00000573852 PATL2C9JE40 543 aaKnown RBP21.87■■□□□ 1.09
SCARF1-206ENST00000573852 TADA3O75528 432 aa21.87■■□□□ 1.09
SCARF1-206ENST00000573852 MMP1P03956 469 aa21.87■■□□□ 1.09
SCARF1-206ENST00000573852 IFNAR1P17181 557 aa21.87■■□□□ 1.09
SCARF1-206ENST00000573852 POSTNQ15063 836 aa21.87■■□□□ 1.09
SCARF1-206ENST00000573852 DIS3L2Q8IYB7 885 aaKnown RBP21.87■■□□□ 1.09
SCARF1-206ENST00000573852 FBXO2Q9UK22 296 aaPredicted RBP21.87■■□□□ 1.09
SCARF1-206ENST00000573852 LRP6O75581 1613 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms