RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SLC26A6Q9BXS9 759 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 LY9Q9HBG7 655 aa17.99■□□□□ 0.47
NUP88-207ENST00000573584 FAM217BQ9NTX9 383 aaPredicted RBP17.99■□□□□ 0.47
NUP88-207ENST00000573584 CLCN6P51797 869 aa17.98■□□□□ 0.47
NUP88-207ENST00000573584 KRI1Q8N9T8 703 aaKnown RBP17.98■□□□□ 0.47
NUP88-207ENST00000573584 UBXN4Q92575 508 aa17.98■□□□□ 0.47
NUP88-207ENST00000573584 TBC1D2BQ9UPU7 963 aa17.98■□□□□ 0.47
NUP88-207ENST00000573584 UBR2Q8IWV8 1755 aa17.98■□□□□ 0.47
NUP88-207ENST00000573584 PDE6AP16499 860 aa17.98■□□□□ 0.47
NUP88-207ENST00000573584 SPECC1Q5M775 1068 aa17.98■□□□□ 0.47
NUP88-207ENST00000573584 SGMS1Q86VZ5 419 aa17.98■□□□□ 0.47
NUP88-207ENST00000573584 REXO1L1PQ8IX06 675 aa17.98■□□□□ 0.47
NUP88-207ENST00000573584 AIDAQ96BJ3 306 aa17.98■□□□□ 0.47
NUP88-207ENST00000573584 ANKRD18BA2A2Z9 1011 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 FOXN1O15353 648 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 URI1O94763 535 aaPredicted RBP17.97■□□□□ 0.47
NUP88-207ENST00000573584 IL2RBP14784 551 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 BMP6P22004 513 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 GPTP24298 496 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 PDE4BQ07343 736 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 SSRP1Q08945 709 aaKnown RBP17.97■□□□□ 0.47
NUP88-207ENST00000573584 HSP90AA4PQ58FG1 418 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 SLC12A7Q9Y666 1083 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 DDX60Q8IY21 1712 aaKnown RBP17.97■□□□□ 0.47
NUP88-207ENST00000573584 ZSCAN12O43309 604 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 MNS1Q8NEH6 495 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 STRBPQ96SI9 672 aaKnown RBP17.97■□□□□ 0.47
NUP88-207ENST00000573584 WWC3Q9ULE0 1092 aa17.97■□□□□ 0.47
NUP88-207ENST00000573584 ATRNO75882 1429 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 CADPS2Q86UW7 1296 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 NOSTRINQ8IVI9 506 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 DNAJC10Q8IXB1 793 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 ZSWIM5Q9P217 1185 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 HOOK1Q9UJC3 728 aaKnown RBP17.96■□□□□ 0.47
NUP88-207ENST00000573584 TNS2Q63HR2 1409 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 IFIT3O14879 490 aaKnown RBP17.96■□□□□ 0.47
NUP88-207ENST00000573584 PDE8BO95263 885 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 PHKA1P46020 1223 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 MDM2Q00987 491 aaPredicted RBP17.96■□□□□ 0.47
NUP88-207ENST00000573584 FCHSD1Q86WN1 690 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 SRRTQ9BXP5 876 aaKnown RBP17.96■□□□□ 0.47
NUP88-207ENST00000573584 ST7Q9NRC1 585 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 INTS13Q9NVM9 706 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 TMOD3Q9NYL9 352 aa17.96■□□□□ 0.47
NUP88-207ENST00000573584 BTBD18B2RXH4 712 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 FANCGO15287 622 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 ARHGAP6O43182 974 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 LIFRP42702 1097 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 VGLL2Q8N8G2 317 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 FHOD1Q9Y613 1164 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 GIGYF2Q6Y7W6 1299 aaKnown RBP17.95■□□□□ 0.46
NUP88-207ENST00000573584 FAM177A1Q8N128 213 aaPredicted RBP17.95■□□□□ 0.46
NUP88-207ENST00000573584 STK11IPQ8N1F8 1099 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 PPP2R2CQ9Y2T4 447 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 TCRBV5S4A2TA0A5A2 114 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 CDK11BP21127 795 aaKnown RBP17.95■□□□□ 0.46
NUP88-207ENST00000573584 CTSWP56202 376 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 SAFBQ15424 915 aaKnown RBP eCLIP17.95■□□□□ 0.46
NUP88-207ENST00000573584 HLFQ16534 295 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 TMEM139Q8IV31 216 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 PDILTQ8N807 584 aa17.95■□□□□ 0.46
NUP88-207ENST00000573584 CDHR2Q9BYE9 1310 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 FMNL1O95466 1100 aaPredicted RBP17.94■□□□□ 0.46
NUP88-207ENST00000573584 CTDSPL2Q05D32 466 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 ELOA2Q8IYF1 753 aaPredicted RBP17.94■□□□□ 0.46
NUP88-207ENST00000573584 WASF1Q92558 559 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 BAG1Q99933 345 aaPredicted RBP17.94■□□□□ 0.46
NUP88-207ENST00000573584 TEX13AQ9BXU3 409 aaPredicted RBP17.94■□□□□ 0.46
NUP88-207ENST00000573584 NAPBQ9H115 298 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 ARGLU1Q9NWB6 273 aaPredicted RBP17.94■□□□□ 0.46
NUP88-207ENST00000573584 MAP3K15Q6ZN16 1313 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 STK36Q9NRP7 1315 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 PATL2C9JE40 543 aaKnown RBP17.94■□□□□ 0.46
NUP88-207ENST00000573584 POSTNQ15063 836 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 ALX1Q15699 326 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 IFNL3Q8IZI9 196 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 CARD6Q9BX69 1037 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 MAN1B1Q9UKM7 699 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 PARP3Q9Y6F1 533 aa17.94■□□□□ 0.46
NUP88-207ENST00000573584 VWA3AA6NCI4 1184 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 STARD3NLO95772 234 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 UQCRFS1P1P0C7P4 283 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 GUCY1A2P33402 732 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 TOB1P50616 345 aaPredicted RBP17.93■□□□□ 0.46
NUP88-207ENST00000573584 DIS3L2Q8IYB7 885 aaKnown RBP17.93■□□□□ 0.46
NUP88-207ENST00000573584 ASAP1Q9ULH1 1129 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 KCNJ14Q9UNX9 436 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 NFE2L3Q9Y4A8 694 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 MYH7P12883 1935 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 IRS4O14654 1257 aaPredicted RBP17.93■□□□□ 0.46
NUP88-207ENST00000573584 POLR2DO15514 142 aaKnown RBP17.93■□□□□ 0.46
NUP88-207ENST00000573584 MMP1P03956 469 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 IFNAR1P17181 557 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 ARID4AP29374 1257 aaPredicted RBP17.93■□□□□ 0.46
NUP88-207ENST00000573584 TBX2Q13207 712 aaPredicted RBP17.93■□□□□ 0.46
NUP88-207ENST00000573584 AKAP11Q9UKA4 1901 aa17.93■□□□□ 0.46
NUP88-207ENST00000573584 EFCAB8A8MWE9 144 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 TADA3O75528 432 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 PNMA6AP0CW24 399 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms