RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TBC1D9Q6ZT07 1266 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 SYMPKQ92797 1274 aaKnown RBP9.49□□□□□ -0.89
SMG6-211ENST00000572369 ZDHHC15Q96MV8 337 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 PTPN22Q9Y2R2 807 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 DAGLAQ9Y4D2 1042 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 PPP2R3BQ9Y5P8 575 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 MAST2Q6P0Q8 1798 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 RPTORQ8N122 1335 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 SMARCA5O60264 1052 aaPredicted RBP9.48□□□□□ -0.89
SMG6-211ENST00000572369 ZAP70P43403 619 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 CACNB3P54284 484 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 IRX6P78412 446 aaPredicted RBP9.48□□□□□ -0.89
SMG6-211ENST00000572369 MECOMQ03112 1051 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 AAMPQ13685 434 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 RASA3Q14644 834 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 ARMC9Q7Z3E5 817 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 ZNF512BQ96KM6 892 aaPredicted RBP9.48□□□□□ -0.89
SMG6-211ENST00000572369 CFHR5Q9BXR6 569 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 DCTPP1Q9H773 170 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 USP40Q9NVE5 1235 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 AOX1Q06278 1338 aa9.48□□□□□ -0.89
SMG6-211ENST00000572369 TNFRSF10AO00220 468 aa9.47□□□□□ -0.89
SMG6-211ENST00000572369 ZBTB22O15209 634 aa9.47□□□□□ -0.89
SMG6-211ENST00000572369 PPP1R12BO60237 982 aaPredicted RBP9.47□□□□□ -0.89
SMG6-211ENST00000572369 IDH1O75874 414 aaKnown RBP9.47□□□□□ -0.89
SMG6-211ENST00000572369 FKBP1BP68106 108 aa9.47□□□□□ -0.89
SMG6-211ENST00000572369 NAA16Q6N069 864 aaPredicted RBP9.47□□□□□ -0.89
SMG6-211ENST00000572369 APOBEC3HQ6NTF7 200 aaKnown RBP9.47□□□□□ -0.89
SMG6-211ENST00000572369 EXOC6Q8TAG9 804 aa9.47□□□□□ -0.89
SMG6-211ENST00000572369 GPATCH3Q96I76 525 aa9.47□□□□□ -0.89
SMG6-211ENST00000572369 ZNF333Q96JL9 665 aa9.47□□□□□ -0.89
SMG6-211ENST00000572369 DNAJC2Q99543 621 aaKnown RBP9.47□□□□□ -0.89
SMG6-211ENST00000572369 ANGEL1Q9UNK9 670 aaKnown RBP9.47□□□□□ -0.89
SMG6-211ENST00000572369 MROH7-TTC4A0A0A0MT08 1334 aa9.47□□□□□ -0.89
SMG6-211ENST00000572369 PIEZO1Q92508 2521 aa9.46□□□□□ -0.89
SMG6-211ENST00000572369 UBE2Q2LH0YL09 131 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 CYP2E1P05181 493 aaPredicted RBP9.46□□□□□ -0.9
SMG6-211ENST00000572369 BTDP43251 543 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 TCP10Q12799 353 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 TTF1Q15361 905 aaPredicted RBP9.46□□□□□ -0.9
SMG6-211ENST00000572369 SLC4A8Q2Y0W8 1093 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 NBPF12Q5TAG4 269 aaPredicted RBP9.46□□□□□ -0.9
SMG6-211ENST00000572369 CDC42EP5Q6NZY7 148 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 MOB2Q70IA6 237 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 NSUN4Q96CB9 384 aaKnown RBP9.46□□□□□ -0.9
SMG6-211ENST00000572369 TMEM39BQ9GZU3 492 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 R3HDMLQ9H3Y0 253 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 RWDD1Q9H446 243 aaPredicted RBP9.46□□□□□ -0.9
SMG6-211ENST00000572369 NR2E3Q9Y5X4 410 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 NDUFB9Q9Y6M9 179 aa9.46□□□□□ -0.9
SMG6-211ENST00000572369 DOCK2Q92608 1830 aa9.45□□□□□ -0.9
SMG6-211ENST00000572369 BAG3O95817 575 aa9.45□□□□□ -0.9
SMG6-211ENST00000572369 IREB2P48200 963 aaKnown RBP9.45□□□□□ -0.9
SMG6-211ENST00000572369 PICALMQ13492 652 aa9.45□□□□□ -0.9
SMG6-211ENST00000572369 ANKRD45Q5TZF3 282 aa9.45□□□□□ -0.9
SMG6-211ENST00000572369 FAM83AQ86UY5 434 aa9.45□□□□□ -0.9
SMG6-211ENST00000572369 ZSCAN29Q8IWY8 852 aaPredicted RBP9.45□□□□□ -0.9
SMG6-211ENST00000572369 HOOK2Q96ED9 719 aa9.45□□□□□ -0.9
SMG6-211ENST00000572369 BOLA2Q9H3K6 86 aa9.45□□□□□ -0.9
SMG6-211ENST00000572369 PIH1D3Q9NQM4 214 aaKnown RBP9.45□□□□□ -0.9
SMG6-211ENST00000572369 FZD1Q9UP38 647 aa9.45□□□□□ -0.9
SMG6-211ENST00000572369 GAKO14976 1311 aa9.45□□□□□ -0.9
SMG6-211ENST00000572369 GOLIM4O00461 696 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 PLCG2P16885 1265 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 CYP7A1P22680 504 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 TM4SF4P48230 202 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 RGS3P49796 1198 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 FKBP1CQ5VVH2 108 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 MAGEB6Q8N7X4 407 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMG6-211ENST00000572369 FAM151AQ8WW52 585 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 SLC10A4Q96EP9 437 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 FAM163AQ96GL9 167 aaPredicted RBP9.44□□□□□ -0.9
SMG6-211ENST00000572369 PAG1Q9NWQ8 432 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 AATFQ9NY61 560 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMG6-211ENST00000572369 MYH7P12883 1935 aa9.44□□□□□ -0.9
SMG6-211ENST00000572369 GPR75-ASB3A0A0A6YYF3 556 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 IGSF3O75054 1194 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 ATP5JP18859 108 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 NFIAQ12857 509 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 HDAC1Q13547 482 aaPredicted RBP9.43□□□□□ -0.9
SMG6-211ENST00000572369 DCAF15Q66K64 600 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 B4GALNT3Q6L9W6 998 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 TEX11Q8IYF3 940 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 HTATIP2Q9BUP3 242 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMG6-211ENST00000572369 ANTXR1Q9H6X2 564 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 ECHDC1Q9NTX5 307 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 ARIH1Q9Y4X5 557 aaPredicted RBP9.43□□□□□ -0.9
SMG6-211ENST00000572369 OTOFQ9HC10 1997 aa9.43□□□□□ -0.9
SMG6-211ENST00000572369 CDK5RAP2Q96SN8 1893 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 SSC5DA1L4H1 1573 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 ERC2O15083 957 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 ENTPD3O75355 529 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 USP2O75604 605 aaPredicted RBP9.42□□□□□ -0.9
SMG6-211ENST00000572369 MAP4K4O95819 1239 aaPredicted RBP9.42□□□□□ -0.9
SMG6-211ENST00000572369 MKRN3Q13064 507 aaKnown RBP9.42□□□□□ -0.9
SMG6-211ENST00000572369 LRIT3Q3SXY7 679 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 SLC9C2Q5TAH2 1124 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms