RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SUPT16HQ9Y5B9 1047 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 SNCAIPQ9Y6H5 919 aa12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 RPAP1Q9BWH6 1393 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 MAST2Q6P0Q8 1798 aa12.5□□□□□ -0.41
GTF3C1-213ENST00000571886 ATRNL1Q5VV63 1379 aa12.49□□□□□ -0.41
GTF3C1-213ENST00000571886 CYP7A1P22680 504 aa12.49□□□□□ -0.41
GTF3C1-213ENST00000571886 PPP4CP60510 307 aa12.49□□□□□ -0.41
GTF3C1-213ENST00000571886 MAGEB6Q8N7X4 407 aa12.49□□□□□ -0.41
GTF3C1-213ENST00000571886 WRNIP1Q96S55 665 aa12.49□□□□□ -0.41
GTF3C1-213ENST00000571886 DNAJC2Q99543 621 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-213ENST00000571886 ZNF341Q9BYN7 854 aa12.49□□□□□ -0.41
GTF3C1-213ENST00000571886 R3HDMLQ9H3Y0 253 aa12.49□□□□□ -0.41
GTF3C1-213ENST00000571886 ZNF112Q9UJU3 913 aa12.49□□□□□ -0.41
GTF3C1-213ENST00000571886 LAMB1P07942 1786 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 UNCXA6NJT0 531 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 FAM196BA6NMK8 535 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 PHF20L1A8MW92 1017 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 GOLIM4O00461 696 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 TBC1D8O95759 1140 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 CHGBP05060 677 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 ZSCAN29Q8IWY8 852 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 TEX11Q8IYF3 940 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 MIGA1Q8NAN2 632 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 EXOC6Q8TAG9 804 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 PTPN18Q99952 460 aa12.48□□□□□ -0.41
GTF3C1-213ENST00000571886 FOCADQ5VW36 1801 aa12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 IGF2BP3O00425 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 CA12O43570 354 aa12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 ZBTB48P10074 688 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 ATP5JP18859 108 aa12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 MAP3K10Q02779 954 aa12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 TSHZ3Q63HK5 1081 aa12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 OTUD7AQ8TE49 926 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 TGFBRAP1Q8WUH2 860 aa12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 OSBPL5Q9H0X9 879 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-213ENST00000571886 SIPA1L1O43166 1804 aa12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 MANSC4A6NHS7 340 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 SPDYE5A6NIY4 337 aa12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 RRP1BQ14684 758 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 IFNL1Q8IU54 200 aa12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 MAPKAPK5Q8IW41 473 aa12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 TNS4Q8IZW8 715 aa12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 HAUS7Q99871 368 aa12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 SAGE1Q9NXZ1 904 aa12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 CSADQ9Y600 493 aa12.46□□□□□ -0.41
GTF3C1-213ENST00000571886 TCRBV5S4A2TA0A5A2 114 aa12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 BAG3O95817 575 aa12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 MAP4K4O95819 1239 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 PDE6AP16499 860 aa12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 MAP3K12Q12852 859 aa12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 BRI3BPQ8WY22 251 aa12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 HOOK2Q96ED9 719 aa12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 PAG1Q9NWQ8 432 aa12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 MYH1P12882 1939 aa12.45□□□□□ -0.42
GTF3C1-213ENST00000571886 FLT1P17948 1338 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 ZNF532Q9HCE3 1301 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 IRF6O14896 467 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 IGHDP01880 384 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 IRX6P78412 446 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 SLC4A8Q2Y0W8 1093 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 NOL9Q5SY16 702 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 CCDC84Q86UT8 332 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 ERO1BQ86YB8 467 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 RIOK1Q9BRS2 568 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 PALD1Q9ULE6 856 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 PHIPQ8WWQ0 1821 aa12.44□□□□□ -0.42
GTF3C1-213ENST00000571886 MYH7P12883 1935 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 TBC1D12O60347 775 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 IGSF3O75054 1194 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 PLCG2P16885 1265 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 INHBEP58166 350 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 EVX2Q03828 476 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 HDAC1Q13547 482 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 IFFO2Q5TF58 517 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 FAM43AQ8N2R8 423 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 DNAJC18Q9H819 358 aa12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.43□□□□□ -0.42
GTF3C1-213ENST00000571886 CCL15-CCL14A0A0B4J2E2 113 aa12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 MAGEB6P1A0A0J9YX57 407 aa12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 GPR25O00155 361 aa12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 ADD2P35612 726 aa12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 GTF2A2P52657 109 aa12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 JAG1P78504 1218 aa12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 PPATQ06203 517 aa12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 PPIL2Q13356 520 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms