RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 SCYL3Q8IZE3 742 aa21.74■■□□□ 1.07
CIITA-206ENST00000571190 HMG20BQ9P0W2 317 aa21.74■■□□□ 1.07
CIITA-206ENST00000571190 MROH7-TTC4A0A0A0MT08 1334 aa21.74■■□□□ 1.07
CIITA-206ENST00000571190 GPR75-ASB3A0A0A6YYF3 556 aa21.73■■□□□ 1.07
CIITA-206ENST00000571190 PNMA6EA0A0J9YXQ4 647 aa21.73■■□□□ 1.07
CIITA-206ENST00000571190 MYCP01106 439 aaPredicted RBP21.73■■□□□ 1.07
CIITA-206ENST00000571190 PTPRAP18433 802 aa21.73■■□□□ 1.07
CIITA-206ENST00000571190 PSMC4P43686 418 aa21.73■■□□□ 1.07
CIITA-206ENST00000571190 SPTY2D1Q68D10 685 aaPredicted RBP21.73■■□□□ 1.07
CIITA-206ENST00000571190 ATF7IPQ6VMQ6 1270 aa21.73■■□□□ 1.07
CIITA-206ENST00000571190 ZHX2Q9Y6X8 837 aa21.73■■□□□ 1.07
CIITA-206ENST00000571190 OSBPP22059 807 aa21.72■■□□□ 1.07
CIITA-206ENST00000571190 PRMT2P55345 433 aa21.72■■□□□ 1.07
CIITA-206ENST00000571190 ZSCAN29Q8IWY8 852 aaPredicted RBP21.72■■□□□ 1.07
CIITA-206ENST00000571190 NEUROD6Q96NK8 337 aa21.72■■□□□ 1.07
CIITA-206ENST00000571190 SRRDQ9UH36 339 aa21.72■■□□□ 1.07
CIITA-206ENST00000571190 AFG3L2Q9Y4W6 797 aa21.72■■□□□ 1.07
CIITA-206ENST00000571190 MKI67P46013 3256 aaKnown RBP21.72■■□□□ 1.07
CIITA-206ENST00000571190 A0A0G2JLL6 359 aaPredicted RBP21.71■■□□□ 1.07
CIITA-206ENST00000571190 GNAI2P04899 355 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 CYP2C8P10632 490 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 BCRP11274 1271 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 PICALMQ13492 652 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 SLC4A8Q2Y0W8 1093 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 TBC1D9Q6ZT07 1266 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 ERICH6Q7L0X2 663 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 PRRT2Q7Z6L0 340 aaPredicted RBP21.71■■□□□ 1.07
CIITA-206ENST00000571190 SLF2Q8IX21 1173 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 CLUAP1Q96AJ1 413 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 CENPFP49454 3210 aa21.71■■□□□ 1.07
CIITA-206ENST00000571190 IPO8O15397 1037 aaKnown RBP21.7■■□□□ 1.06
CIITA-206ENST00000571190 FRAT1Q92837 279 aaPredicted RBP21.7■■□□□ 1.06
CIITA-206ENST00000571190 NSUN4Q96CB9 384 aaKnown RBP21.7■■□□□ 1.06
CIITA-206ENST00000571190 PCDH10Q9P2E7 1040 aa21.7■■□□□ 1.06
CIITA-206ENST00000571190 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.7■■□□□ 1.06
CIITA-206ENST00000571190 BRCA2P51587 3418 aa21.69■■□□□ 1.06
CIITA-206ENST00000571190 CTNND1O60716 968 aaKnown RBP21.69■■□□□ 1.06
CIITA-206ENST00000571190 ARID4AP29374 1257 aaPredicted RBP21.69■■□□□ 1.06
CIITA-206ENST00000571190 MTFR1Q15390 333 aa21.69■■□□□ 1.06
CIITA-206ENST00000571190 CCDC84Q86UT8 332 aaPredicted RBP21.69■■□□□ 1.06
CIITA-206ENST00000571190 SPATA5Q8NB90 893 aa21.69■■□□□ 1.06
CIITA-206ENST00000571190 PARK7Q99497 189 aaKnown RBP21.69■■□□□ 1.06
CIITA-206ENST00000571190 PICK1Q9NRD5 415 aa21.69■■□□□ 1.06
CIITA-206ENST00000571190 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
CIITA-206ENST00000571190 FMNL1O95466 1100 aaPredicted RBP21.68■■□□□ 1.06
CIITA-206ENST00000571190 MCAMP43121 646 aa21.68■■□□□ 1.06
CIITA-206ENST00000571190 ZSWIM8A7E2V4 1837 aa21.68■■□□□ 1.06
CIITA-206ENST00000571190 FAM196BA6NMK8 535 aa21.67■■□□□ 1.06
CIITA-206ENST00000571190 TBC1D12O60347 775 aa21.67■■□□□ 1.06
CIITA-206ENST00000571190 HABP4Q5JVS0 413 aaKnown RBP21.67■■□□□ 1.06
CIITA-206ENST00000571190 FASTKD5Q7L8L6 764 aaKnown RBP21.67■■□□□ 1.06
CIITA-206ENST00000571190 TMEM57Q8N5G2 664 aa21.67■■□□□ 1.06
CIITA-206ENST00000571190 GCC1Q96CN9 775 aa21.67■■□□□ 1.06
CIITA-206ENST00000571190 HOXD10P28358 340 aa21.66■■□□□ 1.06
CIITA-206ENST00000571190 G3BP1Q13283 466 aaKnown RBP eCLIP21.66■■□□□ 1.06
CIITA-206ENST00000571190 SHISA4Q96DD7 197 aa21.66■■□□□ 1.06
CIITA-206ENST00000571190 MYPNQ86TC9 1320 aa21.65■■□□□ 1.06
CIITA-206ENST00000571190 GRK4P32298 578 aa21.65■■□□□ 1.06
CIITA-206ENST00000571190 PRKCZQ05513 592 aa21.65■■□□□ 1.06
CIITA-206ENST00000571190 POLA2Q14181 598 aa21.65■■□□□ 1.06
CIITA-206ENST00000571190 RRP1BQ14684 758 aaKnown RBP21.65■■□□□ 1.06
CIITA-206ENST00000571190 GORABQ5T7V8 394 aa21.65■■□□□ 1.06
CIITA-206ENST00000571190 GADL1Q6ZQY3 521 aa21.65■■□□□ 1.06
CIITA-206ENST00000571190 GABRQQ9UN88 632 aa21.65■■□□□ 1.06
CIITA-206ENST00000571190 SLC45A1Q9Y2W3 748 aa21.65■■□□□ 1.06
CIITA-206ENST00000571190 RBBP6Q7Z6E9 1792 aaKnown RBP21.65■■□□□ 1.06
CIITA-206ENST00000571190 TRIM75PA6NK02 468 aa21.64■■□□□ 1.05
CIITA-206ENST00000571190 MAP4K4O95819 1239 aaPredicted RBP21.64■■□□□ 1.05
CIITA-206ENST00000571190 LDHCP07864 332 aa21.64■■□□□ 1.05
CIITA-206ENST00000571190 GSTO1P78417 241 aa21.64■■□□□ 1.05
CIITA-206ENST00000571190 RAET1EQ8TD07 263 aa21.64■■□□□ 1.05
CIITA-206ENST00000571190 RAI14Q9P0K7 980 aa21.64■■□□□ 1.05
CIITA-206ENST00000571190 FCGRTP55899 365 aa21.63■■□□□ 1.05
CIITA-206ENST00000571190 OSBPL5Q9H0X9 879 aaPredicted RBP21.63■■□□□ 1.05
CIITA-206ENST00000571190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.63■■□□□ 1.05
CIITA-206ENST00000571190 KIAA0100Q14667 2235 aaKnown RBP21.62■■□□□ 1.05
CIITA-206ENST00000571190 UQCRFS1P1P0C7P4 283 aa21.62■■□□□ 1.05
CIITA-206ENST00000571190 TREML2Q5T2D2 321 aa21.62■■□□□ 1.05
CIITA-206ENST00000571190 SSH3Q8TE77 659 aa21.62■■□□□ 1.05
CIITA-206ENST00000571190 DBNDD2Q9BQY9 259 aa21.62■■□□□ 1.05
CIITA-206ENST00000571190 GPR108Q9NPR9 543 aa21.62■■□□□ 1.05
CIITA-206ENST00000571190 SNRKQ9NRH2 765 aa21.62■■□□□ 1.05
CIITA-206ENST00000571190 AGTPBP1Q9UPW5 1226 aa21.62■■□□□ 1.05
CIITA-206ENST00000571190 MYH13Q9UKX3 1938 aa21.62■■□□□ 1.05
CIITA-206ENST00000571190 CCL5P13501 91 aa21.61■■□□□ 1.05
CIITA-206ENST00000571190 ATP8B2P98198 1209 aa21.61■■□□□ 1.05
CIITA-206ENST00000571190 TNNI3KQ59H18 835 aa21.61■■□□□ 1.05
CIITA-206ENST00000571190 ZKSCAN2Q63HK3 967 aa21.61■■□□□ 1.05
CIITA-206ENST00000571190 SH3RF3Q8TEJ3 882 aaPredicted RBP21.61■■□□□ 1.05
CIITA-206ENST00000571190 LRP2BPQ9P2M1 347 aa21.61■■□□□ 1.05
CIITA-206ENST00000571190 FPGT-TNNI3KV9GXZ4 949 aa21.61■■□□□ 1.05
CIITA-206ENST00000571190 COL2A1P02458 1487 aaPredicted RBP21.6■■□□□ 1.05
CIITA-206ENST00000571190 UBE2Q1Q7Z7E8 422 aa21.6■■□□□ 1.05
CIITA-206ENST00000571190 TEX11Q8IYF3 940 aa21.6■■□□□ 1.05
CIITA-206ENST00000571190 CYP2E1P05181 493 aaPredicted RBP21.59■■□□□ 1.05
CIITA-206ENST00000571190 GJB1P08034 283 aa21.59■■□□□ 1.05
CIITA-206ENST00000571190 CAP2P40123 477 aa21.59■■□□□ 1.05
CIITA-206ENST00000571190 GJA8P48165 433 aa21.59■■□□□ 1.05
CIITA-206ENST00000571190 SPP2Q13103 211 aa21.59■■□□□ 1.05
CIITA-206ENST00000571190 ADGRA1Q86SQ6 560 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms