RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 AATFQ9NY61 560 aaKnown RBP eCLIP16.35■□□□□ 0.21
RPAIN-207ENST00000570883 SUPT16HQ9Y5B9 1047 aaKnown RBP16.35■□□□□ 0.21
RPAIN-207ENST00000570883 COL2A1P02458 1487 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-207ENST00000570883 DDTLA6NHG4 134 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-207ENST00000570883 IGSF3O75054 1194 aa16.34■□□□□ 0.21
RPAIN-207ENST00000570883 ATP5JP18859 108 aa16.34■□□□□ 0.21
RPAIN-207ENST00000570883 MAGEB6Q8N7X4 407 aa16.34■□□□□ 0.21
RPAIN-207ENST00000570883 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
RPAIN-207ENST00000570883 HOOK2Q96ED9 719 aa16.34■□□□□ 0.21
RPAIN-207ENST00000570883 WRNIP1Q96S55 665 aa16.34■□□□□ 0.21
RPAIN-207ENST00000570883 DNAJC2Q99543 621 aaKnown RBP16.34■□□□□ 0.21
RPAIN-207ENST00000570883 ELP3Q9H9T3 547 aa16.34■□□□□ 0.21
RPAIN-207ENST00000570883 GOLIM4O00461 696 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 CA12O43570 354 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
RPAIN-207ENST00000570883 MAP4K4O95819 1239 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-207ENST00000570883 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 ZBTB48P10074 688 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-207ENST00000570883 PPP4CP60510 307 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 MAP3K9P80192 1104 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 DCAF15Q66K64 600 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 TEX11Q8IYF3 940 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 EXOC6Q8TAG9 804 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 ZNF341Q9BYN7 854 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 SNCAIPQ9Y6H5 919 aa16.33■□□□□ 0.2
RPAIN-207ENST00000570883 CYP7A1P22680 504 aa16.32■□□□□ 0.2
RPAIN-207ENST00000570883 INPP5BP32019 993 aa16.32■□□□□ 0.2
RPAIN-207ENST00000570883 DYNLL1P63167 89 aaKnown RBP16.32■□□□□ 0.2
RPAIN-207ENST00000570883 HDAC1Q13547 482 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-207ENST00000570883 ZKSCAN4Q969J2 545 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-207ENST00000570883 OPTNQ96CV9 577 aa16.32■□□□□ 0.2
RPAIN-207ENST00000570883 HAUS7Q99871 368 aa16.32■□□□□ 0.2
RPAIN-207ENST00000570883 OSBPL5Q9H0X9 879 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-207ENST00000570883 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
RPAIN-207ENST00000570883 RNF186Q9NXI6 227 aa16.32■□□□□ 0.2
RPAIN-207ENST00000570883 BAZ2AQ9UIF9 1905 aaKnown RBP16.32■□□□□ 0.2
RPAIN-207ENST00000570883 BAG3O95817 575 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 PDE6AP16499 860 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 TM4SF4P48230 202 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 TTF1Q15361 905 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-207ENST00000570883 TSHZ3Q63HK5 1081 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 ZSCAN29Q8IWY8 852 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-207ENST00000570883 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-207ENST00000570883 MIGA1Q8NAN2 632 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 OTUD7AQ8TE49 926 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-207ENST00000570883 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
RPAIN-207ENST00000570883 ECHDC1Q9NTX5 307 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 PAG1Q9NWQ8 432 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 SAGE1Q9NXZ1 904 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 ZNF112Q9UJU3 913 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 CSADQ9Y600 493 aa16.31■□□□□ 0.2
RPAIN-207ENST00000570883 FLT1P17948 1338 aa16.3■□□□□ 0.2
RPAIN-207ENST00000570883 SPDYE5A6NIY4 337 aa16.3■□□□□ 0.2
RPAIN-207ENST00000570883 PHF20L1A8MW92 1017 aa16.3■□□□□ 0.2
RPAIN-207ENST00000570883 TRPA1O75762 1119 aa16.3■□□□□ 0.2
RPAIN-207ENST00000570883 PLCG2P16885 1265 aa16.3■□□□□ 0.2
RPAIN-207ENST00000570883 TCRBV5S4A2TA0A5A2 114 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 MAP3K10Q02779 954 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 SREBF2Q12772 1141 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 AAMPQ13685 434 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 SLC9C2Q5TAH2 1124 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 TGFBRAP1Q8WUH2 860 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 RIOK1Q9BRS2 568 aaKnown RBP16.29■□□□□ 0.2
RPAIN-207ENST00000570883 MYH8P13535 1937 aa16.29■□□□□ 0.2
RPAIN-207ENST00000570883 ZNF532Q9HCE3 1301 aa16.28■□□□□ 0.2
RPAIN-207ENST00000570883 MANSC4A6NHS7 340 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-207ENST00000570883 IGF2BP3O00425 579 aaKnown RBP eCLIP16.28■□□□□ 0.2
RPAIN-207ENST00000570883 CHGBP05060 677 aa16.28■□□□□ 0.2
RPAIN-207ENST00000570883 SLFNL1Q499Z3 407 aa16.28■□□□□ 0.2
RPAIN-207ENST00000570883 NOL9Q5SY16 702 aaKnown RBP16.28■□□□□ 0.2
RPAIN-207ENST00000570883 TMED8Q6PL24 325 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-207ENST00000570883 MS4A4AQ96JQ5 239 aa16.28■□□□□ 0.2
RPAIN-207ENST00000570883 SALL3Q9BXA9 1300 aa16.27■□□□□ 0.2
RPAIN-207ENST00000570883 ERO1BQ86YB8 467 aa16.27■□□□□ 0.2
RPAIN-207ENST00000570883 IFNL1Q8IU54 200 aa16.27■□□□□ 0.2
RPAIN-207ENST00000570883 TESPA1A2RU30 521 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-207ENST00000570883 TBC1D12O60347 775 aa16.26■□□□□ 0.19
RPAIN-207ENST00000570883 ADD2P35612 726 aa16.26■□□□□ 0.19
RPAIN-207ENST00000570883 IRX6P78412 446 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-207ENST00000570883 BRI3BPQ8WY22 251 aa16.26■□□□□ 0.19
RPAIN-207ENST00000570883 GCC1Q96CN9 775 aa16.26■□□□□ 0.19
RPAIN-207ENST00000570883 GPATCH3Q96I76 525 aa16.26■□□□□ 0.19
RPAIN-207ENST00000570883 PTPN18Q99952 460 aa16.26■□□□□ 0.19
RPAIN-207ENST00000570883 MAGEB6P1A0A0J9YX57 407 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 IRF6O14896 467 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 TBC1D8O95759 1140 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 IGHDP01880 384 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 INHBEP58166 350 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 PPIL2Q13356 520 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 CERS3Q8IU89 383 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 PI4K2BQ8TCG2 481 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 DNAJC18Q9H819 358 aa16.25■□□□□ 0.19
RPAIN-207ENST00000570883 SAP30BPQ9UHR5 308 aaKnown RBP16.25■□□□□ 0.19
RPAIN-207ENST00000570883 PALD1Q9ULE6 856 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms