RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TRIM47Q96LD4 638 aa10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 ZCCHC17Q9NP64 241 aaKnown RBP10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 PICK1Q9NRD5 415 aa10.66□□□□□ -0.7
CTDNEP1-203ENST00000570385 GAKO14976 1311 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 PNMA6EA0A0J9YXQ4 647 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 ENTPD3O75355 529 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 GNAI3P08754 354 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 TRIM27P14373 513 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 OSBPP22059 807 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 MECOMQ03112 1051 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 MVPQ14764 893 aaKnown RBP10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 NOL9Q5SY16 702 aaKnown RBP10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 ERICH6Q7L0X2 663 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 SCYL3Q8IZE3 742 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 ZNF384Q8TF68 577 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 IDI2Q9BXS1 227 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 HMG20BQ9P0W2 317 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 AKAP2Q9Y2D5 859 aa10.65□□□□□ -0.7
CTDNEP1-203ENST00000570385 BRCA2P51587 3418 aa10.65□□□□□ -0.71
CTDNEP1-203ENST00000570385 ATRNL1Q5VV63 1379 aa10.65□□□□□ -0.71
CTDNEP1-203ENST00000570385 ADGRA2Q96PE1 1338 aa10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 TRIOBPQ9H2D6 2365 aa10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 CXCL11O14625 94 aa10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 PTPRAP18433 802 aa10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 SPTY2D1Q68D10 685 aaPredicted RBP10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 RAET1EQ8TD07 263 aa10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 ARHGAP45Q92619 1136 aa10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 PARK7Q99497 189 aaKnown RBP10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 RAI14Q9P0K7 980 aa10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 BIN2Q9UBW5 565 aaPredicted RBP10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 SRRDQ9UH36 339 aa10.64□□□□□ -0.71
CTDNEP1-203ENST00000570385 MROH7-TTC4A0A0A0MT08 1334 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 MYPNQ86TC9 1320 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 RBBP6Q7Z6E9 1792 aaKnown RBP10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 CCER2I3L3R5 266 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 IPO8O15397 1037 aaKnown RBP10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 GNRH1P01148 92 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 GNAI2P04899 355 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 RHBDL3P58872 404 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 PRKCZQ05513 592 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 G3BP1Q13283 466 aaKnown RBP eCLIP10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 MTX1Q13505 466 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 HABP4Q5JVS0 413 aaKnown RBP10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 ATF7IPQ6VMQ6 1270 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 SLF2Q8IX21 1173 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 SPATA5Q8NB90 893 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 FAM163AQ96GL9 167 aaPredicted RBP10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 SNRKQ9NRH2 765 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 AFG3L2Q9Y4W6 797 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 RFX7Q2KHR2 1363 aa10.63□□□□□ -0.71
CTDNEP1-203ENST00000570385 GPR75-ASB3A0A0A6YYF3 556 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 A0A0G2JLL6 359 aaPredicted RBP10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 BCRP11274 1271 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 HOXD10P28358 340 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 GRK4P32298 578 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 PRMT2P55345 433 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 FASTKD5Q7L8L6 764 aaKnown RBP10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 PRRT2Q7Z6L0 340 aaPredicted RBP10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 TMEM57Q8N5G2 664 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 GCC1Q96CN9 775 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 C1orf115Q9H7X2 142 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 GABRQQ9UN88 632 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 DOCK2Q92608 1830 aa10.62□□□□□ -0.71
CTDNEP1-203ENST00000570385 PDS5AQ29RF7 1337 aaKnown RBP10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 CTNND1O60716 968 aaKnown RBP10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 CCL5P13501 91 aa10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 MCAMP43121 646 aa10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 FCGRTP55899 365 aa10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 MAP3K10Q02779 954 aa10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 OS9Q13438 667 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 RRP1BQ14684 758 aaKnown RBP10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 SH3RF3Q8TEJ3 882 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 SMCR8Q8TEV9 937 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 NSUN4Q96CB9 384 aaKnown RBP10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 SHISA4Q96DD7 197 aa10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 LRP2BPQ9P2M1 347 aa10.61□□□□□ -0.71
CTDNEP1-203ENST00000570385 DOCK3Q8IZD9 2030 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 H0YGN5 161 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 LDHCP07864 332 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 ELNP15502 786 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 ARID4AP29374 1257 aaPredicted RBP10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 GSTO1P78417 241 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 SPP2Q13103 211 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 TREML2Q5T2D2 321 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 TEX11Q8IYF3 940 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 ANKRD13CQ8N6S4 541 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 DBNDD2Q9BQY9 259 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 RNF208Q9H0X6 261 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 PCDH10Q9P2E7 1040 aa10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
CTDNEP1-203ENST00000570385 ZBTB22O15209 634 aa10.59□□□□□ -0.71
CTDNEP1-203ENST00000570385 FLT3LGP49771 235 aa10.59□□□□□ -0.71
CTDNEP1-203ENST00000570385 TTC39AQ5SRH9 613 aa10.59□□□□□ -0.71
CTDNEP1-203ENST00000570385 ZKSCAN2Q63HK3 967 aa10.59□□□□□ -0.71
CTDNEP1-203ENST00000570385 DPF3Q92784 378 aa10.59□□□□□ -0.71
CTDNEP1-203ENST00000570385 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms