RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 PUM3Q15397 648 aaKnown RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 MAP3K11Q16584 847 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 RABL6Q3YEC7 729 aaPredicted RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 LRRC24Q50LG9 513 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 LDLRAD1Q5T700 205 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 SPRYD7Q5W111 196 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 FBXO33Q7Z6M2 555 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 DZIP1LQ8IYY4 767 aaKnown RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 ANKRD13AQ8IZ07 590 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 CERS5Q8N5B7 392 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 MRIQ9BWK5 157 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 API5Q9BZZ5 524 aaKnown RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 USP44Q9H0E7 712 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 TDRD3Q9H7E2 651 aaKnown RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 CEP126Q9P2H0 1117 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 ZNF70Q9UC06 446 aaPredicted RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 IQSEC3Q9UPP2 1182 aaPredicted RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 SUGT1Q9Y2Z0 365 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 CSADQ9Y600 493 aa5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 ZNF646O15015 1829 aaPredicted RBP5.8□□□□□ -1.48
HERPUD1-213ENST00000568358 IRS2Q9Y4H2 1338 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 TCP10L2B9ZVM9 353 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 CCER2I3L3R5 266 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 GPR25O00155 361 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 EYA2O00167 538 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 USP2O75604 605 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 RGS19P49795 217 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 BCAMP50895 628 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 SKIV2LQ15477 1246 aaKnown RBP5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 NOM1Q5C9Z4 860 aaKnown RBP5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 NBPF12Q5TAG4 269 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 FAM177A1Q8N128 213 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 ANKRD44Q8N8A2 993 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 WDR66Q8TBY9 1149 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 ZNF296Q8WUU4 475 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 LPIN2Q92539 896 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 CDCA7LQ96GN5 454 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 KAZALD1Q96I82 304 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 WNK4Q96J92 1243 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 HS3ST6Q96QI5 342 aa5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 NOB1Q9ULX3 412 aaKnown RBP5.79□□□□□ -1.48
HERPUD1-213ENST00000568358 KIF16BQ96L93 1317 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 FAM205CA6NFA0 338 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 CIAO1O76071 339 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 GNAI3P08754 354 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 GTF2A2P52657 109 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 MAP3K9P80192 1104 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 DCAF15Q66K64 600 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 HHIPL2Q6UWX4 724 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 SPNS2Q8IVW8 549 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 SLF2Q8IX21 1173 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 ZGPATQ8N5A5 531 aaKnown RBP5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 BANK1Q8NDB2 785 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 KLHDC4Q8TBB5 520 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 ARHGAP45Q92619 1136 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 ERO1AQ96HE7 468 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 SIL1Q9H173 461 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 FZD1Q9UP38 647 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 AKAP2Q9Y2D5 859 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 PCDHAC2Q9Y5I4 1007 aa5.78□□□□□ -1.48
HERPUD1-213ENST00000568358 RBM47A0AV96 593 aaKnown RBP5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 LDHBP07195 334 aaKnown RBP5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 HOXB1P14653 301 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 IL15P40933 162 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 KIF22Q14807 665 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 ATP2B3Q16720 1220 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 GORABQ5T7V8 394 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 FKBP1CQ5VVH2 108 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 SPTY2D1Q68D10 685 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 FBXO46Q6PJ61 603 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 SND1Q7KZF4 910 aaKnown RBP eCLIP5.77□□□□□ -1.494e-8■■■■□ 19.7
HERPUD1-213ENST00000568358 FAM83AQ86UY5 434 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 TRMT2AQ8IZ69 625 aaKnown RBP5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 VGLL2Q8N8G2 317 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 OPTNQ96CV9 577 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 CLMNQ96JQ2 1002 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 MS4A4AQ96JQ5 239 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 ZDHHC15Q96MV8 337 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 CFHR5Q9BXR6 569 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 TMEM39BQ9GZU3 492 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 ELP3Q9H9T3 547 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 ZFYVE28Q9HCC9 887 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 DENND2AQ9ULE3 1009 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 HPS5Q9UPZ3 1129 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 MYH2Q9UKX2 1941 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 ARAP2Q8WZ64 1704 aa5.77□□□□□ -1.49
HERPUD1-213ENST00000568358 CETPP11597 493 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 HOXB3P14651 431 aaPredicted RBP5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 FGFR2P21802 821 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 RARSP54136 660 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 SOX10P56693 466 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 SP3Q02447 781 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 MMRN1Q13201 1228 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 G3BP1Q13283 466 aaKnown RBP eCLIP5.76□□□□□ -1.493e-10■■□□□ 13.1
HERPUD1-213ENST00000568358 HIC1Q14526 733 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 INTS3Q68E01 1043 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 NBPF11Q86T75 865 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 ERO1BQ86YB8 467 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 FRAT1Q92837 279 aaPredicted RBP5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 WRNIP1Q96S55 665 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms