RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 DLEC1Q9Y238 1755 aa12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 KLF18A0A0U1RQI7 1052 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 STX6O43752 255 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 SYT1P21579 422 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 POLD1P28340 1107 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 PDIA3P30101 505 aaKnown RBP12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 USP5P45974 858 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 DIXDC1Q155Q3 683 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 GRIK5Q16478 980 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 SBK1Q52WX2 424 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 RRP12Q5JTH9 1297 aaKnown RBP12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 CYB5R4Q7L1T6 521 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 AMOTL1Q8IY63 956 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 C7orf43Q8WVR3 580 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 MTA3Q9BTC8 594 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 DCP1AQ9NPI6 582 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 ARPP21Q9UBL0 812 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 ANGEL1Q9UNK9 670 aaKnown RBP12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 BAZ2AQ9UIF9 1905 aaKnown RBP12.77□□□□□ -0.37
VPS9D1-206ENST00000567379 GPR75-ASB3A0A0A6YYF3 556 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 ERICH2A1L162 156 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 USP17L12C9JPN9 530 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 USP17L21D6R901 530 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 SH2B2O14492 632 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 DHX16O60231 1041 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 KDM4AO75164 1064 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 ZSCAN22P10073 491 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 BTDP43251 543 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 SCRN1Q12765 414 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 TMEM67Q5HYA8 995 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 FOXD4L5Q5VV16 416 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 LARP1BQ659C4 914 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 CTR9Q6PD62 1173 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 FOXD4L4Q8WXT5 416 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 ESR2Q92731 530 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 LAMB1P07942 1786 aa12.76□□□□□ -0.37
VPS9D1-206ENST00000567379 GOLGA8BA8MQT2 603 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 GAKO14976 1311 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 CCDC93Q567U6 631 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 SYNE3Q6ZMZ3 975 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 NFXL1Q6ZNB6 911 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 RTKN2Q8IZC4 609 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 TMTC2Q8N394 836 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 FAM184AQ8NB25 1140 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 SMARCC2Q8TAQ2 1214 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 SH3RF3Q8TEJ3 882 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 INCENPQ9NQS7 918 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 ZSWIM5Q9P217 1185 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 ATP6V1DQ9Y5K8 247 aa12.75□□□□□ -0.37
VPS9D1-206ENST00000567379 CCDC69A6NI79 296 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 C21orf2O43822 256 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 ECE2O60344 883 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 FGRP09769 529 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 DPEP1P16444 411 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 LIFRP42702 1097 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 NT5C2P49902 561 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 TGFB2P61812 414 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 FKBP1AP62942 108 aaKnown RBP12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 PDE4BQ07343 736 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 SKOR2Q2VWA4 1001 aaPredicted RBP12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 MCTP1Q6DN14 999 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 SGMS1Q86VZ5 419 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 TEX11Q8IYF3 940 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 STK11IPQ8N1F8 1099 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 DNAJC5GQ8N7S2 189 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 NSUN7Q8NE18 718 aaKnown RBP12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 IGDCC4Q8TDY8 1250 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 UBAC1Q9BSL1 405 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 DBNDD1Q9H9R9 158 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 MCM9Q9NXL9 1143 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 BRPF3Q9ULD4 1205 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 TACC3Q9Y6A5 838 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 NAV1Q8NEY1 1877 aa12.74□□□□□ -0.37
VPS9D1-206ENST00000567379 CYP2D7A0A087X1C5 515 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 VPS37CA5D8V6 355 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 CPLX1O14810 134 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 ORC4O43929 436 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 JAK2O60674 1132 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 F13A1P00488 732 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 KIAA2012Q0VF49 1180 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 WTAPQ15007 396 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 STRIP1Q5VSL9 837 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 CPLX2Q6PUV4 134 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 TGFBRAP1Q8WUH2 860 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 LY9Q9HBG7 655 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 TTF2Q9UNY4 1162 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 MTMR6Q9Y217 621 aa12.73□□□□□ -0.37
VPS9D1-206ENST00000567379 PTPDC1A2A3K4 754 aa12.72□□□□□ -0.37
VPS9D1-206ENST00000567379 USP17L3A6NCW0 530 aa12.72□□□□□ -0.37
VPS9D1-206ENST00000567379 USP17L4A6NCW7 530 aa12.72□□□□□ -0.37
VPS9D1-206ENST00000567379 ZBTB43O43298 467 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms