RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CYP7A1P22680 504 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 TM4SF4P48230 202 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 MAP3K10Q02779 954 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 ADGRA1Q86SQ6 560 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 TEX11Q8IYF3 940 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 MAGEB6Q8N7X4 407 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 WNK4Q96J92 1243 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 ECHDC1Q9NTX5 307 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 AATFQ9NY61 560 aaKnown RBP eCLIP18.75■□□□□ 0.59
COMMD4-212ENST00000565517 ZNF112Q9UJU3 913 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 CSADQ9Y600 493 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 ATRNL1Q5VV63 1379 aa18.75■□□□□ 0.59
COMMD4-212ENST00000565517 COL2A1P02458 1487 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-212ENST00000565517 GOLIM4O00461 696 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 INHBEP58166 350 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 PICALMQ13492 652 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 MIGA2Q7L4E1 593 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 SH3BP5LQ7L8J4 393 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-212ENST00000565517 EXOC6Q8TAG9 804 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 SH3RF3Q8TEJ3 882 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-212ENST00000565517 GPATCH3Q96I76 525 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 DNAJC2Q99543 621 aaKnown RBP18.74■□□□□ 0.59
COMMD4-212ENST00000565517 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 PAG1Q9NWQ8 432 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 SAGE1Q9NXZ1 904 aa18.74■□□□□ 0.59
COMMD4-212ENST00000565517 DDTLA6NHG4 134 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-212ENST00000565517 HSPA8P11142 646 aaKnown RBP18.73■□□□□ 0.59
COMMD4-212ENST00000565517 SREBF2Q12772 1141 aa18.73■□□□□ 0.59
COMMD4-212ENST00000565517 VGLL4Q14135 290 aa18.73■□□□□ 0.59
COMMD4-212ENST00000565517 WRNIP1Q96S55 665 aa18.73■□□□□ 0.59
COMMD4-212ENST00000565517 OSBPL5Q9H0X9 879 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-212ENST00000565517 MANSC4A6NHS7 340 aaPredicted RBP18.72■□□□□ 0.59
COMMD4-212ENST00000565517 TBC1D12O60347 775 aa18.72■□□□□ 0.59
COMMD4-212ENST00000565517 SLC9C2Q5TAH2 1124 aa18.72■□□□□ 0.59
COMMD4-212ENST00000565517 RWDD1Q9H446 243 aaPredicted RBP18.72■□□□□ 0.59
COMMD4-212ENST00000565517 ELP3Q9H9T3 547 aa18.72■□□□□ 0.59
COMMD4-212ENST00000565517 PDE6AP16499 860 aa18.71■□□□□ 0.59
COMMD4-212ENST00000565517 LBX1P52954 281 aa18.71■□□□□ 0.59
COMMD4-212ENST00000565517 MKRN3Q13064 507 aaKnown RBP18.71■□□□□ 0.59
COMMD4-212ENST00000565517 OPTNQ96CV9 577 aa18.71■□□□□ 0.59
COMMD4-212ENST00000565517 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
COMMD4-212ENST00000565517 DHX36Q9H2U1 1008 aaKnown RBP18.71■□□□□ 0.59
COMMD4-212ENST00000565517 RNF186Q9NXI6 227 aa18.71■□□□□ 0.59
COMMD4-212ENST00000565517 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
COMMD4-212ENST00000565517 SNCAIPQ9Y6H5 919 aa18.71■□□□□ 0.59
COMMD4-212ENST00000565517 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.59
COMMD4-212ENST00000565517 MYH1P12882 1939 aa18.7■□□□□ 0.58
COMMD4-212ENST00000565517 GJA5P36382 358 aa18.7■□□□□ 0.58
COMMD4-212ENST00000565517 DYNLL1P63167 89 aaKnown RBP18.7■□□□□ 0.58
COMMD4-212ENST00000565517 NOL9Q5SY16 702 aaKnown RBP18.7■□□□□ 0.58
COMMD4-212ENST00000565517 ERO1BQ86YB8 467 aa18.7■□□□□ 0.58
COMMD4-212ENST00000565517 TGFBRAP1Q8WUH2 860 aa18.7■□□□□ 0.58
COMMD4-212ENST00000565517 ZKSCAN4Q969J2 545 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-212ENST00000565517 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.7■□□□□ 0.58
COMMD4-212ENST00000565517 TCRBV5S4A2TA0A5A2 114 aa18.69■□□□□ 0.58
COMMD4-212ENST00000565517 SPDYE5A6NIY4 337 aa18.69■□□□□ 0.58
COMMD4-212ENST00000565517 PHF20L1A8MW92 1017 aa18.69■□□□□ 0.58
COMMD4-212ENST00000565517 INPP5BP32019 993 aa18.69■□□□□ 0.58
COMMD4-212ENST00000565517 ANKRD45Q5TZF3 282 aa18.69■□□□□ 0.58
COMMD4-212ENST00000565517 MIGA1Q8NAN2 632 aa18.69■□□□□ 0.58
COMMD4-212ENST00000565517 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.69■□□□□ 0.58
COMMD4-212ENST00000565517 FLT1P17948 1338 aa18.69■□□□□ 0.58
COMMD4-212ENST00000565517 ZNF532Q9HCE3 1301 aa18.69■□□□□ 0.58
COMMD4-212ENST00000565517 TESPA1A2RU30 521 aaPredicted RBP18.68■□□□□ 0.58
COMMD4-212ENST00000565517 ERC2O15083 957 aa18.68■□□□□ 0.58
COMMD4-212ENST00000565517 TRPA1O75762 1119 aa18.68■□□□□ 0.58
COMMD4-212ENST00000565517 ADD2P35612 726 aa18.68■□□□□ 0.58
COMMD4-212ENST00000565517 COL13A1Q5TAT6 717 aaPredicted RBP18.68■□□□□ 0.58
COMMD4-212ENST00000565517 ZSCAN25Q6NSZ9 544 aa18.68■□□□□ 0.58
COMMD4-212ENST00000565517 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
COMMD4-212ENST00000565517 RIOK1Q9BRS2 568 aaKnown RBP18.68■□□□□ 0.58
COMMD4-212ENST00000565517 PI4KBQ9UBF8 816 aa18.68■□□□□ 0.58
COMMD4-212ENST00000565517 MAGEB6P1A0A0J9YX57 407 aa18.67■□□□□ 0.58
COMMD4-212ENST00000565517 ALDH1A1P00352 501 aa18.67■□□□□ 0.58
COMMD4-212ENST00000565517 PPATQ06203 517 aa18.67■□□□□ 0.58
COMMD4-212ENST00000565517 UBE3CQ15386 1083 aa18.67■□□□□ 0.58
COMMD4-212ENST00000565517 MAPKAPK5Q8IW41 473 aa18.67■□□□□ 0.58
COMMD4-212ENST00000565517 MS4A4AQ96JQ5 239 aa18.67■□□□□ 0.58
COMMD4-212ENST00000565517 CFHR5Q9BXR6 569 aa18.67■□□□□ 0.58
COMMD4-212ENST00000565517 HERC5Q9UII4 1024 aaKnown RBP18.67■□□□□ 0.58
COMMD4-212ENST00000565517 CASP8AP2Q9UKL3 1982 aa18.67■□□□□ 0.58
COMMD4-212ENST00000565517 SIPA1L1O43166 1804 aa18.67■□□□□ 0.58
COMMD4-212ENST00000565517 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
COMMD4-212ENST00000565517 GLRX3O76003 335 aaKnown RBP18.66■□□□□ 0.58
COMMD4-212ENST00000565517 MX1P20591 662 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 USP5P45974 858 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 GTF2A2P52657 109 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 PPIL2Q13356 520 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 METTL16Q86W50 562 aaKnown RBP18.66■□□□□ 0.58
COMMD4-212ENST00000565517 IFNL1Q8IU54 200 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 FOXP4Q8IVH2 680 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-212ENST00000565517 KBTBD3Q8NAB2 608 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 OTUD5Q96G74 571 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.66■□□□□ 0.58
COMMD4-212ENST00000565517 TSKSQ9UJT2 592 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 DOCK1Q14185 1865 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 SALL3Q9BXA9 1300 aa18.66■□□□□ 0.58
COMMD4-212ENST00000565517 IGHDP01880 384 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms