RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SLC3A2P08195 630 aaKnown RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 BTDP43251 543 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 USP5P45974 858 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 HMGN5P82970 282 aaKnown RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 RRP12Q5JTH9 1297 aaKnown RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 ILDR1Q86SU0 546 aaPredicted RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 SGMS1Q86VZ5 419 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 SH3RF3Q8TEJ3 882 aaPredicted RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 MKRN1Q9UHC7 482 aaKnown RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 DLEC1Q9Y238 1755 aa22.98■■□□□ 1.27
CLN6-205ENST00000564846 GOLGA8BA8MQT2 603 aa22.98■■□□□ 1.27
CLN6-205ENST00000564846 CCT2P78371 535 aaKnown RBP22.98■■□□□ 1.27
CLN6-205ENST00000564846 TMEM67Q5HYA8 995 aa22.98■■□□□ 1.27
CLN6-205ENST00000564846 NSUN7Q8NE18 718 aaKnown RBP22.98■■□□□ 1.27
CLN6-205ENST00000564846 FBXW7Q969H0 707 aa22.98■■□□□ 1.27
CLN6-205ENST00000564846 IFIT3O14879 490 aaKnown RBP22.97■■□□□ 1.27
CLN6-205ENST00000564846 JAK2O60674 1132 aa22.97■■□□□ 1.27
CLN6-205ENST00000564846 LY9Q9HBG7 655 aa22.97■■□□□ 1.27
CLN6-205ENST00000564846 MCM9Q9NXL9 1143 aa22.97■■□□□ 1.27
CLN6-205ENST00000564846 MTMR6Q9Y217 621 aa22.97■■□□□ 1.27
CLN6-205ENST00000564846 KIF3AQ9Y496 699 aa22.97■■□□□ 1.27
CLN6-205ENST00000564846 MCTP1Q6DN14 999 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 MTFR1LQ9H019 292 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 HPS5Q9UPZ3 1129 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 ATP6V1DQ9Y5K8 247 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 MYH2Q9UKX2 1941 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 CYP2D7A0A087X1C5 515 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 ERICH2A1L162 156 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 POLD1P28340 1107 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 NT5C2P49902 561 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 FKBP1AP62942 108 aaKnown RBP22.96■■□□□ 1.27
CLN6-205ENST00000564846 TMTC2Q8N394 836 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 CERS5Q8N5B7 392 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 DBNDD1Q9H9R9 158 aa22.96■■□□□ 1.27
CLN6-205ENST00000564846 C21orf2O43822 256 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 ZBTB7AO95365 584 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 CTDNEP1O95476 244 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 F13A1P00488 732 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 DPEP1P16444 411 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 KIAA2012Q0VF49 1180 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 CCDC93Q567U6 631 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 AMOTL1Q8IY63 956 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 STK11IPQ8N1F8 1099 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 FAM184AQ8NB25 1140 aa22.95■■□□□ 1.26
CLN6-205ENST00000564846 NCOA5Q9HCD5 579 aaKnown RBP22.95■■□□□ 1.26
CLN6-205ENST00000564846 BAZ2AQ9UIF9 1905 aaKnown RBP22.95■■□□□ 1.26
CLN6-205ENST00000564846 PTPDC1A2A3K4 754 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 ORC4O43929 436 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 TRAK2O60296 914 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 DTNBO60941 627 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 KCNA3P22001 575 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 TGFB2P61812 414 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 SKOR2Q2VWA4 1001 aaPredicted RBP22.94■■□□□ 1.26
CLN6-205ENST00000564846 STRIP1Q5VSL9 837 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 APOA5Q6Q788 366 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 NFXL1Q6ZNB6 911 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 RTKN2Q8IZC4 609 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.94■■□□□ 1.26
CLN6-205ENST00000564846 KIF13BQ9NQT8 1826 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 VPS37CA5D8V6 355 aaPredicted RBP22.94■■□□□ 1.26
CLN6-205ENST00000564846 ECE2O60344 883 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 PDE4BQ07343 736 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 TGFBRAP1Q8WUH2 860 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 UBAC1Q9BSL1 405 aa22.94■■□□□ 1.26
CLN6-205ENST00000564846 TTF2Q9UNY4 1162 aaKnown RBP22.94■■□□□ 1.26
CLN6-205ENST00000564846 CCDC69A6NI79 296 aa22.93■■□□□ 1.26
CLN6-205ENST00000564846 SMIM22K7EJ46 135 aa22.93■■□□□ 1.26
CLN6-205ENST00000564846 RHBDL3P58872 404 aa22.93■■□□□ 1.26
CLN6-205ENST00000564846 WTAPQ15007 396 aa22.93■■□□□ 1.26
CLN6-205ENST00000564846 C12orf60Q5U649 245 aa22.93■■□□□ 1.26
CLN6-205ENST00000564846 TEX11Q8IYF3 940 aa22.93■■□□□ 1.26
CLN6-205ENST00000564846 DAGLAQ9Y4D2 1042 aa22.93■■□□□ 1.26
CLN6-205ENST00000564846 SLC12A7Q9Y666 1083 aa22.93■■□□□ 1.26
CLN6-205ENST00000564846 LAMB1P07942 1786 aa22.92■■□□□ 1.26
CLN6-205ENST00000564846 ZBTB43O43298 467 aa22.92■■□□□ 1.26
CLN6-205ENST00000564846 USP17L8P0C7I0 530 aa22.92■■□□□ 1.26
CLN6-205ENST00000564846 METAP2P50579 478 aaKnown RBP eCLIP22.92■■□□□ 1.26
CLN6-205ENST00000564846 SYNE3Q6ZMZ3 975 aa22.92■■□□□ 1.26
CLN6-205ENST00000564846 DDX11Q96FC9 970 aa22.92■■□□□ 1.26
CLN6-205ENST00000564846 PSMD1Q99460 953 aa22.92■■□□□ 1.26
CLN6-205ENST00000564846 CPLX1O14810 134 aa22.91■■□□□ 1.26
CLN6-205ENST00000564846 CYP2D6P10635 497 aa22.91■■□□□ 1.26
CLN6-205ENST00000564846 AOC3Q16853 763 aa22.91■■□□□ 1.26
CLN6-205ENST00000564846 RCAN1P53805 252 aa22.91■■□□□ 1.26
CLN6-205ENST00000564846 SOGA3Q5TF21 947 aa22.91■■□□□ 1.26
CLN6-205ENST00000564846 HHIPL2Q6UWX4 724 aa22.91■■□□□ 1.26
CLN6-205ENST00000564846 IQCA1Q86XH1 822 aa22.91■■□□□ 1.26
CLN6-205ENST00000564846 SENP2Q9HC62 589 aa22.91■■□□□ 1.26
CLN6-205ENST00000564846 ATF5Q9Y2D1 282 aaPredicted RBP22.91■■□□□ 1.26
CLN6-205ENST00000564846 ROBO3Q96MS0 1386 aa22.91■■□□□ 1.26
CLN6-205ENST00000564846 USP17L3A6NCW0 530 aa22.9■■□□□ 1.26
CLN6-205ENST00000564846 USP17L4A6NCW7 530 aa22.9■■□□□ 1.26
CLN6-205ENST00000564846 F8W031 263 aaPredicted RBP22.9■■□□□ 1.26
CLN6-205ENST00000564846 RANBP6O60518 1105 aaKnown RBP22.9■■□□□ 1.26
CLN6-205ENST00000564846 DACT2Q5SW24 774 aa22.9■■□□□ 1.26
CLN6-205ENST00000564846 USP17L1Q7RTZ2 530 aa22.9■■□□□ 1.26
CLN6-205ENST00000564846 MAPKAPK5Q8IW41 473 aa22.9■■□□□ 1.26
CLN6-205ENST00000564846 ZSCAN10Q96SZ4 725 aaPredicted RBP22.9■■□□□ 1.26
CLN6-205ENST00000564846 ZKSCAN3Q9BRR0 538 aa22.9■■□□□ 1.26
CLN6-205ENST00000564846 MXD3Q9BW11 206 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms