RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 USP17L3A6NCW0 530 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 USP17L4A6NCW7 530 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 AMPD1P23109 780 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 CTCFP49711 727 aaPredicted RBP7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 CLDN10P78369 228 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 SAMD5Q5TGI4 173 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 USPL1Q5W0Q7 1092 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 CCDC102BQ68D86 513 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 USP17L2Q6R6M4 530 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 USP17L1Q7RTZ2 530 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 TTLL6Q8N841 843 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 TPCN2Q8NHX9 752 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 ABHD8Q96I13 439 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 SUV39H2Q9H5I1 410 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 PRDM10Q9NQV6 1147 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 GJA3Q9Y6H8 435 aa7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 BRCA1P38398 1863 aaKnown RBP7.11□□□□□ -1.27
TUBGCP4-209ENST00000564511 KDM6AO15550 1401 aaPredicted RBP7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 CCDC85CA6NKD9 419 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 H0YIN7 160 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 NFKBIEO00221 500 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 EML1O00423 815 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 EFSO43281 561 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 ATP9BO43861 1147 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 MTHFSP49914 203 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 EIF4A2Q14240 407 aaKnown RBP7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 PLEKHO1Q53GL0 409 aaPredicted RBP7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 SH3PXD2AQ5TCZ1 1133 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 ZNF530Q6P9A1 599 aaPredicted RBP7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 INTS5Q6P9B9 1019 aaKnown RBP7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 FCHSD1Q86WN1 690 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 C2CD5Q86YS7 1000 aa7.1□□□□□ -1.27
TUBGCP4-209ENST00000564511 PROCP04070 461 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 SERPINB2P05120 415 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 ADH6P28332 368 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 TNNT2P45379 298 aaPredicted RBP7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 ATP1A2P50993 1020 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 LBX1P52954 281 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 PCBP4P57723 403 aaKnown RBP7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 NFIXQ14938 502 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 CDCA8Q53HL2 280 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 LRRC69Q6ZNQ3 347 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 AVENQ9NQS1 362 aaPredicted RBP7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 MARK1Q9P0L2 795 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 POLKQ9UBT6 870 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 ZNF232Q9UNY5 417 aa7.09□□□□□ -1.27
TUBGCP4-209ENST00000564511 CNTNAP1P78357 1384 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 SERTM1A2A2V5 107 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 TNRC18O15417 2968 aaPredicted RBP7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 C21orf2O43822 256 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 DDNO94850 711 aaPredicted RBP7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 DKK1O94907 266 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 DGKGP49619 791 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 AMOTQ4VCS5 1084 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 C1orf141Q5JVX7 400 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 CHSY3Q70JA7 882 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 DNAJC10Q8IXB1 793 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 OGFOD1Q8N543 542 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 ZNF622Q969S3 477 aaKnown RBP eCLIP7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 CLUAP1Q96AJ1 413 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 NARFQ9UHQ1 456 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 SBF1O95248 1867 aa7.08□□□□□ -1.28
TUBGCP4-209ENST00000564511 ZNF831Q5JPB2 1677 aa7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 TMEM88BA6NKF7 163 aa7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 LAMC2Q13753 1193 aa7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 GRIN2CQ14957 1233 aa7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 ZNF468Q5VIY5 522 aaPredicted RBP7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 ALYREFQ86V81 257 aaKnown RBP7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 LARGE2Q8N3Y3 721 aa7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 TSPAN10Q9H1Z9 355 aaPredicted RBP7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 PRR12Q9ULL5 1215 aa7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 COL5A3P25940 1745 aaPredicted RBP7.07□□□□□ -1.28
TUBGCP4-209ENST00000564511 SOS1Q07889 1333 aaPredicted RBP7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 MYH14Q7Z406 1995 aaKnown RBP7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 IQCA1LA6NCM1 817 aa7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 PALM3A6NDB9 673 aaPredicted RBP7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 M0R2N6 131 aa7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 GNB5O14775 395 aa7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 CYP19A1P11511 503 aaPredicted RBP7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 LDHDQ86WU2 507 aa7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 TFIP11Q9UBB9 837 aaKnown RBP7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 HCN4Q9Y3Q4 1203 aa7.06□□□□□ -1.28
TUBGCP4-209ENST00000564511 PASKQ96RG2 1323 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 PDE4DIPQ5VU43 2346 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 SFI1A8K8P3 1242 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 HSPA8P11142 646 aaKnown RBP7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 CANXP27824 592 aaKnown RBP7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 PDE6BP35913 854 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 PSMA6P60900 246 aaKnown RBP7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 SFSWAPQ12872 951 aaKnown RBP7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 TMEM132AQ24JP5 1023 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 DEFB115Q30KQ5 88 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 EAPPQ56P03 285 aaPredicted RBP7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 AEBP1Q8IUX7 1158 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 SIX5Q8N196 739 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 TSEN2Q8NCE0 465 aaKnown RBP7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 BRIP1Q9BX63 1249 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 TAOK3Q9H2K8 898 aa7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 TAF1DQ9H5J8 278 aaPredicted RBP7.05□□□□□ -1.28
TUBGCP4-209ENST00000564511 NEUROD4Q9HD90 331 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms