RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 RASAL3Q86YV0 1011 aa20.99■□□□□ 0.95
USB1-209ENST00000564387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.99■□□□□ 0.95
USB1-209ENST00000564387 RIOK1Q9BRS2 568 aaKnown RBP20.99■□□□□ 0.95
USB1-209ENST00000564387 FOCADQ5VW36 1801 aa20.99■□□□□ 0.95
USB1-209ENST00000564387 CDK5RAP2Q96SN8 1893 aa20.98■□□□□ 0.95
USB1-209ENST00000564387 ERC2O15083 957 aa20.98■□□□□ 0.95
USB1-209ENST00000564387 ADD2P35612 726 aa20.98■□□□□ 0.95
USB1-209ENST00000564387 CHD1LQ86WJ1 897 aa20.98■□□□□ 0.95
USB1-209ENST00000564387 TEX11Q8IYF3 940 aa20.98■□□□□ 0.95
USB1-209ENST00000564387 ANKRD13AQ8IZ07 590 aa20.98■□□□□ 0.95
USB1-209ENST00000564387 ZBTB47Q9UFB7 747 aaPredicted RBP20.98■□□□□ 0.95
USB1-209ENST00000564387 ZNF112Q9UJU3 913 aa20.98■□□□□ 0.95
USB1-209ENST00000564387 ZNF532Q9HCE3 1301 aa20.98■□□□□ 0.95
USB1-209ENST00000564387 DDTLA6NHG4 134 aaPredicted RBP20.97■□□□□ 0.95
USB1-209ENST00000564387 AOC2O75106 756 aa20.97■□□□□ 0.95
USB1-209ENST00000564387 PDE1AP54750 535 aa20.97■□□□□ 0.95
USB1-209ENST00000564387 DYNLL1P63167 89 aaKnown RBP20.97■□□□□ 0.95
USB1-209ENST00000564387 UBE3CQ15386 1083 aa20.97■□□□□ 0.95
USB1-209ENST00000564387 DCAF15Q66K64 600 aa20.97■□□□□ 0.95
USB1-209ENST00000564387 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.97■□□□□ 0.95
USB1-209ENST00000564387 PAXIP1Q6ZW49 1069 aaPredicted RBP20.97■□□□□ 0.95
USB1-209ENST00000564387 KBTBD3Q8NAB2 608 aa20.97■□□□□ 0.95
USB1-209ENST00000564387 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.97■□□□□ 0.95
USB1-209ENST00000564387 OSBPL5Q9H0X9 879 aaPredicted RBP20.97■□□□□ 0.95
USB1-209ENST00000564387 WBP1LQ9NX94 342 aa20.97■□□□□ 0.95
USB1-209ENST00000564387 OTOFQ9HC10 1997 aa20.97■□□□□ 0.95
USB1-209ENST00000564387 MIGA1Q8NAN2 632 aa20.96■□□□□ 0.95
USB1-209ENST00000564387 ZIC5Q96T25 663 aa20.96■□□□□ 0.95
USB1-209ENST00000564387 LNPKQ9C0E8 428 aa20.96■□□□□ 0.95
USB1-209ENST00000564387 MYH7P12883 1935 aa20.96■□□□□ 0.95
USB1-209ENST00000564387 LAMB1P07942 1786 aa20.95■□□□□ 0.94
USB1-209ENST00000564387 TBC1D12O60347 775 aa20.95■□□□□ 0.94
USB1-209ENST00000564387 MAP3K9P80192 1104 aa20.95■□□□□ 0.94
USB1-209ENST00000564387 PICALMQ13492 652 aa20.95■□□□□ 0.94
USB1-209ENST00000564387 CLMNQ96JQ2 1002 aa20.95■□□□□ 0.94
USB1-209ENST00000564387 CSRNP1Q96S65 589 aa20.95■□□□□ 0.94
USB1-209ENST00000564387 OSBPL3Q9H4L5 887 aa20.95■□□□□ 0.94
USB1-209ENST00000564387 MAP2K1Q02750 393 aaPredicted RBP20.94■□□□□ 0.94
USB1-209ENST00000564387 SPRYD7Q5W111 196 aa20.94■□□□□ 0.94
USB1-209ENST00000564387 B4GALNT3Q6L9W6 998 aa20.94■□□□□ 0.94
USB1-209ENST00000564387 ZSCAN25Q6NSZ9 544 aa20.94■□□□□ 0.94
USB1-209ENST00000564387 MIGA2Q7L4E1 593 aa20.94■□□□□ 0.94
USB1-209ENST00000564387 METTL16Q86W50 562 aaKnown RBP20.94■□□□□ 0.94
USB1-209ENST00000564387 TGFBRAP1Q8WUH2 860 aa20.94■□□□□ 0.94
USB1-209ENST00000564387 SLC10A4Q96EP9 437 aa20.94■□□□□ 0.94
USB1-209ENST00000564387 ZNF341Q9BYN7 854 aa20.94■□□□□ 0.94
USB1-209ENST00000564387 DHX36Q9H2U1 1008 aaKnown RBP20.94■□□□□ 0.94
USB1-209ENST00000564387 FLT1P17948 1338 aa20.94■□□□□ 0.94
USB1-209ENST00000564387 MAGEB6P1A0A0J9YX57 407 aa20.93■□□□□ 0.94
USB1-209ENST00000564387 PHF20L1A8MW92 1017 aa20.93■□□□□ 0.94
USB1-209ENST00000564387 REM2Q8IYK8 340 aaPredicted RBP20.93■□□□□ 0.94
USB1-209ENST00000564387 AK9Q5TCS8 1911 aa20.92■□□□□ 0.94
USB1-209ENST00000564387 CHGBP05060 677 aa20.92■□□□□ 0.94
USB1-209ENST00000564387 ZBTB48P10074 688 aaPredicted RBP20.92■□□□□ 0.94
USB1-209ENST00000564387 KIF23Q02241 960 aaPredicted RBP20.92■□□□□ 0.94
USB1-209ENST00000564387 GRM1Q13255 1194 aa20.92■□□□□ 0.94
USB1-209ENST00000564387 VGLL4Q14135 290 aa20.92■□□□□ 0.94
USB1-209ENST00000564387 SLFNL1Q499Z3 407 aa20.92■□□□□ 0.94
USB1-209ENST00000564387 TICAM2Q86XR7 235 aa20.92■□□□□ 0.94
USB1-209ENST00000564387 PLEKHM2Q8IWE5 1019 aa20.92■□□□□ 0.94
USB1-209ENST00000564387 ZFYP08048 801 aaPredicted RBP20.91■□□□□ 0.94
USB1-209ENST00000564387 NOL9Q5SY16 702 aaKnown RBP20.91■□□□□ 0.94
USB1-209ENST00000564387 MAPKAPK5Q8IW41 473 aa20.91■□□□□ 0.94
USB1-209ENST00000564387 ZSCAN29Q8IWY8 852 aaPredicted RBP20.91■□□□□ 0.94
USB1-209ENST00000564387 WNK4Q96J92 1243 aa20.91■□□□□ 0.94
USB1-209ENST00000564387 WRNIP1Q96S55 665 aa20.91■□□□□ 0.94
USB1-209ENST00000564387 PI4KBQ9UBF8 816 aa20.91■□□□□ 0.94
USB1-209ENST00000564387 SNCAIPQ9Y6H5 919 aa20.91■□□□□ 0.94
USB1-209ENST00000564387 SIPA1L1O43166 1804 aa20.9■□□□□ 0.94
USB1-209ENST00000564387 HSPA1AP0DMV8 641 aaKnown RBP20.9■□□□□ 0.94
USB1-209ENST00000564387 HSPA1BP0DMV9 641 aaKnown RBP20.9■□□□□ 0.94
USB1-209ENST00000564387 GJA5P36382 358 aa20.9■□□□□ 0.94
USB1-209ENST00000564387 TM4SF4P48230 202 aa20.9■□□□□ 0.94
USB1-209ENST00000564387 ZKSCAN4Q969J2 545 aaPredicted RBP20.9■□□□□ 0.94
USB1-209ENST00000564387 DDX60LQ5H9U9 1706 aaKnown RBP20.9■□□□□ 0.94
USB1-209ENST00000564387 SPDYE5A6NIY4 337 aa20.89■□□□□ 0.93
USB1-209ENST00000564387 RNF113AO15541 343 aaKnown RBP20.89■□□□□ 0.93
USB1-209ENST00000564387 INPP5BP32019 993 aa20.89■□□□□ 0.93
USB1-209ENST00000564387 LCORLQ8N3X6 602 aa20.89■□□□□ 0.93
USB1-209ENST00000564387 CRNKL1Q9BZJ0 848 aaKnown RBP20.89■□□□□ 0.93
USB1-209ENST00000564387 PUS7LQ9H0K6 701 aaKnown RBP20.89■□□□□ 0.93
USB1-209ENST00000564387 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
USB1-209ENST00000564387 CSADQ9Y600 493 aa20.89■□□□□ 0.93
USB1-209ENST00000564387 SLURP2P0DP57 97 aa20.88■□□□□ 0.93
USB1-209ENST00000564387 LRRFIP1Q32MZ4 808 aaKnown RBP20.88■□□□□ 0.93
USB1-209ENST00000564387 FOXP4Q8IVH2 680 aaPredicted RBP20.88■□□□□ 0.93
USB1-209ENST00000564387 APPBP2Q92624 585 aa20.88■□□□□ 0.93
USB1-209ENST00000564387 EVI5LQ96CN4 794 aa20.88■□□□□ 0.93
USB1-209ENST00000564387 ELP3Q9H9T3 547 aa20.88■□□□□ 0.93
USB1-209ENST00000564387 PALD1Q9ULE6 856 aa20.88■□□□□ 0.93
USB1-209ENST00000564387 TESPA1A2RU30 521 aaPredicted RBP20.87■□□□□ 0.93
USB1-209ENST00000564387 MBD4O95243 580 aa20.87■□□□□ 0.93
USB1-209ENST00000564387 USP5P45974 858 aa20.87■□□□□ 0.93
USB1-209ENST00000564387 ERO1BQ86YB8 467 aa20.87■□□□□ 0.93
USB1-209ENST00000564387 OSBP2Q969R2 916 aa20.87■□□□□ 0.93
USB1-209ENST00000564387 OPTNQ96CV9 577 aa20.87■□□□□ 0.93
USB1-209ENST00000564387 ARMT1Q9H993 441 aa20.87■□□□□ 0.93
USB1-209ENST00000564387 DCP1AQ9NPI6 582 aaPredicted RBP20.87■□□□□ 0.93
USB1-209ENST00000564387 MYH1P12882 1939 aa20.86■□□□□ 0.93
USB1-209ENST00000564387 CA12O43570 354 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms