RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 FOXN1O15353 648 aa20.31■□□□□ 0.84
CMTM3-208ENST00000564247 BAG3O95817 575 aa20.31■□□□□ 0.84
CMTM3-208ENST00000564247 CHGBP05060 677 aa20.31■□□□□ 0.84
CMTM3-208ENST00000564247 ZNF157P51786 506 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-208ENST00000564247 SLFNL1Q499Z3 407 aa20.31■□□□□ 0.84
CMTM3-208ENST00000564247 FAM163AQ96GL9 167 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-208ENST00000564247 SEC62Q99442 399 aaKnown RBP20.31■□□□□ 0.84
CMTM3-208ENST00000564247 PUS7LQ9H0K6 701 aaKnown RBP20.31■□□□□ 0.84
CMTM3-208ENST00000564247 TDRD3Q9H7E2 651 aaKnown RBP20.31■□□□□ 0.84
CMTM3-208ENST00000564247 UPF2Q9HAU5 1272 aaKnown RBP20.31■□□□□ 0.84
CMTM3-208ENST00000564247 ZNF70Q9UC06 446 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-208ENST00000564247 TNFAIP1Q13829 316 aa20.3■□□□□ 0.84
CMTM3-208ENST00000564247 CERS3Q8IU89 383 aa20.3■□□□□ 0.84
CMTM3-208ENST00000564247 ZDHHC15Q96MV8 337 aa20.3■□□□□ 0.84
CMTM3-208ENST00000564247 CCDC171Q6TFL3 1326 aa20.29■□□□□ 0.84
CMTM3-208ENST00000564247 M0R2C6 588 aa20.29■□□□□ 0.84
CMTM3-208ENST00000564247 CTCFP49711 727 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-208ENST00000564247 DIXDC1Q155Q3 683 aa20.29■□□□□ 0.84
CMTM3-208ENST00000564247 HHIPL2Q6UWX4 724 aa20.29■□□□□ 0.84
CMTM3-208ENST00000564247 MOB2Q70IA6 237 aa20.29■□□□□ 0.84
CMTM3-208ENST00000564247 ZNF384Q8TF68 577 aa20.29■□□□□ 0.84
CMTM3-208ENST00000564247 ANO2Q9NQ90 1003 aa20.29■□□□□ 0.84
CMTM3-208ENST00000564247 MYH2Q9UKX2 1941 aa20.29■□□□□ 0.84
CMTM3-208ENST00000564247 MROH7-TTC4A0A0A0MT08 1334 aa20.28■□□□□ 0.84
CMTM3-208ENST00000564247 UBE2Q2LH0YL09 131 aa20.28■□□□□ 0.84
CMTM3-208ENST00000564247 GPAA1O43292 621 aa20.28■□□□□ 0.84
CMTM3-208ENST00000564247 SLC10A3P09131 477 aa20.28■□□□□ 0.84
CMTM3-208ENST00000564247 GNAT2P19087 354 aa20.28■□□□□ 0.84
CMTM3-208ENST00000564247 TTLL12Q14166 644 aaPredicted RBP20.28■□□□□ 0.84
CMTM3-208ENST00000564247 RASA3Q14644 834 aa20.28■□□□□ 0.84
CMTM3-208ENST00000564247 MIGA1Q8NAN2 632 aa20.28■□□□□ 0.84
CMTM3-208ENST00000564247 MAST2Q6P0Q8 1798 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 MBD4O95243 580 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 SEC24BO95487 1268 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 PLCG2P16885 1265 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 PPP4CP60510 307 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 SUPT20HL1Q3ZLR7 823 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 APOBEC3HQ6NTF7 200 aaKnown RBP20.27■□□□□ 0.84
CMTM3-208ENST00000564247 CCDC129Q6ZRS4 1044 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 ARMC9Q7Z3E5 817 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 ADGRA1Q86SQ6 560 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 ZIC5Q96T25 663 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 BEGAINQ9BUH8 593 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 ARMT1Q9H993 441 aa20.27■□□□□ 0.84
CMTM3-208ENST00000564247 AATFQ9NY61 560 aaKnown RBP eCLIP20.27■□□□□ 0.84
CMTM3-208ENST00000564247 SSC5DA1L4H1 1573 aa20.26■□□□□ 0.83
CMTM3-208ENST00000564247 GPR75-ASB3A0A0A6YYF3 556 aa20.26■□□□□ 0.83
CMTM3-208ENST00000564247 EPB41L2O43491 1005 aaKnown RBP20.26■□□□□ 0.83
CMTM3-208ENST00000564247 COL13A1Q5TAT6 717 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-208ENST00000564247 ZNF589Q86UQ0 364 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-208ENST00000564247 RASAL3Q86YV0 1011 aa20.26■□□□□ 0.83
CMTM3-208ENST00000564247 STRBPQ96SI9 672 aaKnown RBP20.26■□□□□ 0.83
CMTM3-208ENST00000564247 GAKO14976 1311 aa20.26■□□□□ 0.83
CMTM3-208ENST00000564247 BTDP43251 543 aa20.25■□□□□ 0.83
CMTM3-208ENST00000564247 TNNI2P48788 182 aa20.25■□□□□ 0.83
CMTM3-208ENST00000564247 DYNLL1P63167 89 aaKnown RBP20.25■□□□□ 0.83
CMTM3-208ENST00000564247 MAP3K11Q16584 847 aa20.25■□□□□ 0.83
CMTM3-208ENST00000564247 LDLRAD1Q5T700 205 aa20.25■□□□□ 0.83
CMTM3-208ENST00000564247 NBPF12Q5TAG4 269 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-208ENST00000564247 FKBP1CQ5VVH2 108 aa20.25■□□□□ 0.83
CMTM3-208ENST00000564247 CRNKL1Q9BZJ0 848 aaKnown RBP20.25■□□□□ 0.83
CMTM3-208ENST00000564247 IL25Q9H293 177 aa20.25■□□□□ 0.83
CMTM3-208ENST00000564247 PRDM10Q9NQV6 1147 aa20.25■□□□□ 0.83
CMTM3-208ENST00000564247 DAGLAQ9Y4D2 1042 aa20.25■□□□□ 0.83
CMTM3-208ENST00000564247 TCP10L2B9ZVM9 353 aa20.24■□□□□ 0.83
CMTM3-208ENST00000564247 PATL2C9JE40 543 aaKnown RBP20.24■□□□□ 0.83
CMTM3-208ENST00000564247 CA12O43570 354 aa20.24■□□□□ 0.83
CMTM3-208ENST00000564247 PPP1R12BO60237 982 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-208ENST00000564247 APPP05067 770 aa20.24■□□□□ 0.83
CMTM3-208ENST00000564247 KIF23Q02241 960 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-208ENST00000564247 PRKG1Q13976 671 aa20.24■□□□□ 0.83
CMTM3-208ENST00000564247 LCORLQ8N3X6 602 aa20.24■□□□□ 0.83
CMTM3-208ENST00000564247 RIOK1Q9BRS2 568 aaKnown RBP20.24■□□□□ 0.83
CMTM3-208ENST00000564247 NACAP1Q9BZK3 213 aa20.24■□□□□ 0.83
CMTM3-208ENST00000564247 TMOD2Q9NZR1 351 aa20.24■□□□□ 0.83
CMTM3-208ENST00000564247 ANGEL1Q9UNK9 670 aaKnown RBP20.24■□□□□ 0.83
CMTM3-208ENST00000564247 SLC4A4Q9Y6R1 1079 aa20.24■□□□□ 0.83
CMTM3-208ENST00000564247 HSPD1P10809 573 aaKnown RBP20.23■□□□□ 0.83
CMTM3-208ENST00000564247 HSPA8P11142 646 aaKnown RBP20.23■□□□□ 0.83
CMTM3-208ENST00000564247 MCCP23508 829 aa20.23■□□□□ 0.83
CMTM3-208ENST00000564247 DDRGK1Q96HY6 314 aa20.23■□□□□ 0.83
CMTM3-208ENST00000564247 TEPSINQ96N21 525 aa20.23■□□□□ 0.83
CMTM3-208ENST00000564247 DSCC1Q9BVC3 393 aa20.23■□□□□ 0.83
CMTM3-208ENST00000564247 USP26Q9BXU7 913 aa20.23■□□□□ 0.83
CMTM3-208ENST00000564247 LSG1Q9H089 658 aaKnown RBP20.23■□□□□ 0.83
CMTM3-208ENST00000564247 RPAP1Q9BWH6 1393 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-208ENST00000564247 UNCXA6NJT0 531 aa20.22■□□□□ 0.83
CMTM3-208ENST00000564247 LBX1P52954 281 aa20.22■□□□□ 0.83
CMTM3-208ENST00000564247 FAM83AQ86UY5 434 aa20.22■□□□□ 0.83
CMTM3-208ENST00000564247 REM2Q8IYK8 340 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-208ENST00000564247 MAP4K1Q92918 833 aa20.22■□□□□ 0.83
CMTM3-208ENST00000564247 TMEM39BQ9GZU3 492 aa20.22■□□□□ 0.83
CMTM3-208ENST00000564247 USP40Q9NVE5 1235 aa20.22■□□□□ 0.83
CMTM3-208ENST00000564247 CTNNA3Q9UI47 895 aa20.22■□□□□ 0.83
CMTM3-208ENST00000564247 FZD1Q9UP38 647 aa20.22■□□□□ 0.83
CMTM3-208ENST00000564247 U3KPZ7 1027 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-208ENST00000564247 CACNB3P54284 484 aa20.21■□□□□ 0.83
CMTM3-208ENST00000564247 PTH1RQ03431 593 aa20.21■□□□□ 0.83
CMTM3-208ENST00000564247 TEX11Q8IYF3 940 aa20.21■□□□□ 0.83
CMTM3-208ENST00000564247 SH3RF3Q8TEJ3 882 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms