RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 MMP14P50281 582 aa11.69□□□□□ -0.54
UBFD1-203ENST00000564106 RABEP1Q15276 862 aa11.69□□□□□ -0.54
UBFD1-203ENST00000564106 DIXDC1Q155Q3 683 aa11.69□□□□□ -0.54
UBFD1-203ENST00000564106 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.69□□□□□ -0.54
UBFD1-203ENST00000564106 ARMC9Q7Z3E5 817 aa11.69□□□□□ -0.54
UBFD1-203ENST00000564106 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
UBFD1-203ENST00000564106 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
UBFD1-203ENST00000564106 PTPN18Q99952 460 aa11.69□□□□□ -0.54
UBFD1-203ENST00000564106 PAG1Q9NWQ8 432 aa11.69□□□□□ -0.54
UBFD1-203ENST00000564106 SERPINA10Q9UK55 444 aa11.69□□□□□ -0.54
UBFD1-203ENST00000564106 DOCK2Q92608 1830 aa11.69□□□□□ -0.54
UBFD1-203ENST00000564106 ZFYP08048 801 aaPredicted RBP11.68□□□□□ -0.54
UBFD1-203ENST00000564106 PRDX5P30044 214 aa11.68□□□□□ -0.54
UBFD1-203ENST00000564106 NF2P35240 595 aa11.68□□□□□ -0.54
UBFD1-203ENST00000564106 SOX10P56693 466 aa11.68□□□□□ -0.54
UBFD1-203ENST00000564106 TTF1Q15361 905 aaPredicted RBP11.68□□□□□ -0.54
UBFD1-203ENST00000564106 ELP3Q9H9T3 547 aa11.68□□□□□ -0.54
UBFD1-203ENST00000564106 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
UBFD1-203ENST00000564106 MYH2Q9UKX2 1941 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 GPR25O00155 361 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 RGS19P49795 217 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 NFIAQ12857 509 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 ZSCAN25Q6NSZ9 544 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 CWC27Q6UX04 472 aaKnown RBP11.67□□□□□ -0.54
UBFD1-203ENST00000564106 HSCBQ8IWL3 235 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 ZFPM1Q8IX07 1006 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 ZNF384Q8TF68 577 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.67□□□□□ -0.54
UBFD1-203ENST00000564106 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 CENPFP49454 3210 aa11.67□□□□□ -0.54
UBFD1-203ENST00000564106 ST18O60284 1047 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 ARID4AP29374 1257 aaPredicted RBP11.66□□□□□ -0.54
UBFD1-203ENST00000564106 VGLL4Q14135 290 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 CAVIN4Q5BKX8 364 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 PI16Q6UXB8 463 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 CTU1Q7Z7A3 348 aaKnown RBP11.66□□□□□ -0.54
UBFD1-203ENST00000564106 VPS37DQ86XT2 251 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.66□□□□□ -0.54
UBFD1-203ENST00000564106 SNX21Q969T3 373 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 DAGLAQ9Y4D2 1042 aa11.66□□□□□ -0.54
UBFD1-203ENST00000564106 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
UBFD1-203ENST00000564106 BRCA2P51587 3418 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 GOLIM4O00461 696 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 MYO1BO43795 1136 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 CCDC102BQ68D86 513 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 BRI3BPQ8WY22 251 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 TEKT1Q969V4 418 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 OPTNQ96CV9 577 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 SLC10A4Q96EP9 437 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 IL17RAQ96F46 866 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 CFHR5Q9BXR6 569 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 HELLSQ9NRZ9 838 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 GNL3LQ9NVN8 582 aaKnown RBP11.65□□□□□ -0.54
UBFD1-203ENST00000564106 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 HPS5Q9UPZ3 1129 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 SNCAIPQ9Y6H5 919 aa11.65□□□□□ -0.54
UBFD1-203ENST00000564106 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
UBFD1-203ENST00000564106 ZBTB22O15209 634 aa11.64□□□□□ -0.55
UBFD1-203ENST00000564106 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
UBFD1-203ENST00000564106 HSPA4P34932 840 aa11.64□□□□□ -0.55
UBFD1-203ENST00000564106 HDLBPQ00341 1268 aaKnown RBP11.64□□□□□ -0.55
UBFD1-203ENST00000564106 NMIQ13287 307 aaPredicted RBP11.64□□□□□ -0.55
UBFD1-203ENST00000564106 CRHR2Q13324 411 aa11.64□□□□□ -0.55
UBFD1-203ENST00000564106 RASGRF1Q13972 1273 aa11.64□□□□□ -0.55
UBFD1-203ENST00000564106 SUPT20HL1Q3ZLR7 823 aa11.64□□□□□ -0.55
UBFD1-203ENST00000564106 RNF20Q5VTR2 975 aa11.64□□□□□ -0.55
UBFD1-203ENST00000564106 CDC42EP5Q6NZY7 148 aa11.64□□□□□ -0.55
UBFD1-203ENST00000564106 ZKSCAN4Q969J2 545 aaPredicted RBP11.64□□□□□ -0.55
UBFD1-203ENST00000564106 LSG1Q9H089 658 aaKnown RBP11.64□□□□□ -0.55
UBFD1-203ENST00000564106 ATRNL1Q5VV63 1379 aa11.64□□□□□ -0.55
UBFD1-203ENST00000564106 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
UBFD1-203ENST00000564106 SEMA3EO15041 775 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 PPP1R12BO60237 982 aaPredicted RBP11.63□□□□□ -0.55
UBFD1-203ENST00000564106 IGSF3O75054 1194 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 ZBTB48P10074 688 aaPredicted RBP11.63□□□□□ -0.55
UBFD1-203ENST00000564106 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
UBFD1-203ENST00000564106 INPP5BP32019 993 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 IREB2P48200 963 aaKnown RBP11.63□□□□□ -0.55
UBFD1-203ENST00000564106 MCM2P49736 904 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 MCMDC2Q4G0Z9 681 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 HHIPL2Q6UWX4 724 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 MIGA2Q7L4E1 593 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 SH3BP5LQ7L8J4 393 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
UBFD1-203ENST00000564106 ANKRD13AQ8IZ07 590 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 FAM43AQ8N2R8 423 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 TBC1D22AQ8WUA7 517 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 KIF2CQ99661 725 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 HMG20BQ9P0W2 317 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 MAST2Q6P0Q8 1798 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 SIPA1L1O43166 1804 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 PHIPQ8WWQ0 1821 aa11.63□□□□□ -0.55
UBFD1-203ENST00000564106 PDE4DIPQ5VU43 2346 aa11.62□□□□□ -0.55
UBFD1-203ENST00000564106 A0A0D9SFI3 127 aa11.62□□□□□ -0.55
UBFD1-203ENST00000564106 MANSC4A6NHS7 340 aaPredicted RBP11.62□□□□□ -0.55
UBFD1-203ENST00000564106 RNF113AO15541 343 aaKnown RBP11.62□□□□□ -0.55
UBFD1-203ENST00000564106 MCAMP43121 646 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms