RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 DAPK1P53355 1430 aa8.83□□□□□ -1
HERPUD1-208ENST00000563911 XRCC5P13010 732 aaKnown RBP8.83□□□□□ -1
HERPUD1-208ENST00000563911 ERCC5P28715 1186 aaPredicted RBP8.83□□□□□ -1
HERPUD1-208ENST00000563911 SRSF11Q05519 484 aaKnown RBP8.83□□□□□ -1
HERPUD1-208ENST00000563911 SPRED3Q2MJR0 410 aa8.83□□□□□ -1
HERPUD1-208ENST00000563911 C3orf58Q8NDZ4 430 aa8.83□□□□□ -1
HERPUD1-208ENST00000563911 POP1Q99575 1024 aaKnown RBP8.83□□□□□ -1
HERPUD1-208ENST00000563911 BHLHE41Q9C0J9 482 aaPredicted RBP8.83□□□□□ -1
HERPUD1-208ENST00000563911 SLC52A1Q9NWF4 448 aa8.83□□□□□ -1
HERPUD1-208ENST00000563911 NAGPAQ9UK23 515 aa8.83□□□□□ -1
HERPUD1-208ENST00000563911 SETBP1Q9Y6X0 1596 aa8.82□□□□□ -1
HERPUD1-208ENST00000563911 A0A096LPE4 126 aa8.82□□□□□ -1
HERPUD1-208ENST00000563911 A0A1W2PPZ6 126 aa8.82□□□□□ -1
HERPUD1-208ENST00000563911 KRT76Q01546 638 aa8.82□□□□□ -1
HERPUD1-208ENST00000563911 PSAPL1Q6NUJ1 521 aa8.82□□□□□ -1
HERPUD1-208ENST00000563911 ZFYVE1Q9HBF4 777 aa8.82□□□□□ -1
HERPUD1-208ENST00000563911 TMEM131LA2VDJ0 1609 aa8.82□□□□□ -1
HERPUD1-208ENST00000563911 NCOA3Q9Y6Q9 1424 aa8.81□□□□□ -1
HERPUD1-208ENST00000563911 ADAMTS2O95450 1211 aa8.81□□□□□ -1
HERPUD1-208ENST00000563911 ST13P50502 369 aaKnown RBP8.81□□□□□ -1
HERPUD1-208ENST00000563911 SLCO4C1Q6ZQN7 724 aa8.81□□□□□ -1
HERPUD1-208ENST00000563911 NT5DC4Q86YG4 428 aa8.81□□□□□ -1
HERPUD1-208ENST00000563911 C8orf37Q96NL8 207 aa8.81□□□□□ -1
HERPUD1-208ENST00000563911 MDFIQ99750 246 aa8.81□□□□□ -1
HERPUD1-208ENST00000563911 CROCC2H7BZ55 1655 aa8.81□□□□□ -1
HERPUD1-208ENST00000563911 MST1RQ04912 1400 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 SETD5Q9C0A6 1442 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 RGS9O75916 674 aaPredicted RBP8.8□□□□□ -1
HERPUD1-208ENST00000563911 ATF3P18847 181 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 RBM6P78332 1123 aaKnown RBP8.8□□□□□ -1
HERPUD1-208ENST00000563911 HS2ST1Q7LGA3 356 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 METTL16Q86W50 562 aaKnown RBP8.8□□□□□ -1
HERPUD1-208ENST00000563911 NUDT8Q8WV74 236 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 ACDQ96AP0 544 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 LPIN3Q9BQK8 851 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 FRRS1LQ9P0K9 344 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 GGT7Q9UJ14 662 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 ASXL1Q8IXJ9 1541 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
HERPUD1-208ENST00000563911 KANK1Q14678 1352 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 PNPLA6Q8IY17 1366 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 FAM177BA6PVY3 158 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 EPXP11678 715 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 PTPRAP18433 802 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 ITPKAP23677 461 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 PTPN12Q05209 780 aaKnown RBP8.79□□□□□ -1
HERPUD1-208ENST00000563911 CCDC85BQ15834 202 aaPredicted RBP8.79□□□□□ -1
HERPUD1-208ENST00000563911 GDF6Q6KF10 455 aaPredicted RBP8.79□□□□□ -1
HERPUD1-208ENST00000563911 BSNDQ8WZ55 320 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 PPM1HQ9ULR3 514 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 TRIM33Q9UPN9 1127 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 PTPN23Q9H3S7 1636 aa8.79□□□□□ -1
HERPUD1-208ENST00000563911 GCC2Q8IWJ2 1684 aa8.78□□□□□ -1
HERPUD1-208ENST00000563911 FBXO24O75426 580 aa8.78□□□□□ -1
HERPUD1-208ENST00000563911 TPTE2Q6XPS3 522 aa8.78□□□□□ -1
HERPUD1-208ENST00000563911 GALNT6Q8NCL4 622 aa8.78□□□□□ -1
HERPUD1-208ENST00000563911 EDARADDQ8WWZ3 215 aa8.78□□□□□ -1
HERPUD1-208ENST00000563911 MUC3BQ9H195 1237 aa8.78□□□□□ -1
HERPUD1-208ENST00000563911 EP400Q96L91 3159 aa8.78□□□□□ -1
HERPUD1-208ENST00000563911 METP08581 1390 aa8.77□□□□□ -1.01
HERPUD1-208ENST00000563911 NHSL1Q5SYE7 1610 aa8.77□□□□□ -1.01
HERPUD1-208ENST00000563911 C1orf229Q6ZS94 237 aaPredicted RBP8.77□□□□□ -1.01
HERPUD1-208ENST00000563911 ZNF576Q9H609 170 aa8.77□□□□□ -1.01
HERPUD1-208ENST00000563911 JPH1Q9HDC5 661 aaPredicted RBP8.77□□□□□ -1.01
HERPUD1-208ENST00000563911 STARD13Q9Y3M8 1113 aa8.77□□□□□ -1.01
HERPUD1-208ENST00000563911 NRXN3Q9Y4C0 1643 aa8.76□□□□□ -1.01
HERPUD1-208ENST00000563911 ANKRD30AQ9BXX3 1397 aa8.76□□□□□ -1.01
HERPUD1-208ENST00000563911 ADAMTSL4Q6UY14 1074 aa8.76□□□□□ -1.01
HERPUD1-208ENST00000563911 TTC9Q92623 222 aa8.76□□□□□ -1.01
HERPUD1-208ENST00000563911 LRRC59Q96AG4 307 aaKnown RBP8.76□□□□□ -1.01
HERPUD1-208ENST00000563911 NOC4LQ9BVI4 516 aaKnown RBP8.76□□□□□ -1.01
HERPUD1-208ENST00000563911 CEP44Q9C0F1 390 aa8.76□□□□□ -1.01
HERPUD1-208ENST00000563911 SH2B1Q9NRF2 756 aaPredicted RBP8.76□□□□□ -1.01
HERPUD1-208ENST00000563911 CDC27P30260 824 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 GMPRP36959 345 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 RAD51AP2Q09MP3 1159 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 ZNF394Q53GI3 561 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 RPS26P11Q5JNZ5 115 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 SV2BQ7L1I2 683 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 USP48Q86UV5 1035 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 ORAI2Q96SN7 254 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 ADAM19Q9H013 955 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 CLEC4MQ9H2X3 399 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 CCSER2Q9H7U1 834 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 SEC31BQ9NQW1 1179 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 GPN3Q9UHW5 284 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 SOX13Q9UN79 622 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 TRPM2O94759 1503 aa8.75□□□□□ -1.01
HERPUD1-208ENST00000563911 PIK3R4Q99570 1358 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 UNC13BO14795 1591 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 OIP5O43482 229 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 WFS1O76024 890 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 ALBP02768 609 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 BCRP11274 1271 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 AMPD1P23109 780 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 ZNF157P51786 506 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 CABP4P57796 275 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 ZC3H6P61129 1189 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 PCDH1Q08174 1060 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms