RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 DNAH12Q6ZR08 3092 aa20.1■□□□□ 0.81
RNF40-205ENST00000563909 MUC3AQ02505 3323 aa20.09■□□□□ 0.81
RNF40-205ENST00000563909 TRIM32Q13049 653 aa20.09■□□□□ 0.81
RNF40-205ENST00000563909 EPHA10Q5JZY3 1008 aa20.09■□□□□ 0.81
RNF40-205ENST00000563909 ZNF697Q5TEC3 545 aa20.09■□□□□ 0.81
RNF40-205ENST00000563909 MAFAQ8NHW3 353 aaPredicted RBP20.09■□□□□ 0.81
RNF40-205ENST00000563909 CDX2Q99626 313 aaPredicted RBP20.09■□□□□ 0.81
RNF40-205ENST00000563909 OGDHLQ9ULD0 1010 aa20.09■□□□□ 0.81
RNF40-205ENST00000563909 SLC45A1Q9Y2W3 748 aa20.09■□□□□ 0.81
RNF40-205ENST00000563909 DDX60LQ5H9U9 1706 aaKnown RBP20.09■□□□□ 0.81
RNF40-205ENST00000563909 PFASO15067 1338 aa20.08■□□□□ 0.81
RNF40-205ENST00000563909 FKBP5Q13451 457 aaPredicted RBP20.08■□□□□ 0.81
RNF40-205ENST00000563909 HHIPL2Q6UWX4 724 aa20.08■□□□□ 0.81
RNF40-205ENST00000563909 PICK1Q9NRD5 415 aa20.08■□□□□ 0.81
RNF40-205ENST00000563909 FLIIQ13045 1269 aa20.07■□□□□ 0.8
RNF40-205ENST00000563909 SYMPKQ92797 1274 aaKnown RBP20.07■□□□□ 0.8
RNF40-205ENST00000563909 PUS3Q9BZE2 481 aaKnown RBP20.07■□□□□ 0.8
RNF40-205ENST00000563909 AFG3L2Q9Y4W6 797 aa20.07■□□□□ 0.8
RNF40-205ENST00000563909 MAST3O60307 1309 aa20.06■□□□□ 0.8
RNF40-205ENST00000563909 PTPRAP18433 802 aa20.06■□□□□ 0.8
RNF40-205ENST00000563909 TSR2Q969E8 191 aaKnown RBP20.06■□□□□ 0.8
RNF40-205ENST00000563909 NFIAQ12857 509 aa20.05■□□□□ 0.8
RNF40-205ENST00000563909 CAVIN4Q5BKX8 364 aa20.05■□□□□ 0.8
RNF40-205ENST00000563909 SCYL3Q8IZE3 742 aa20.05■□□□□ 0.8
RNF40-205ENST00000563909 SUGT1Q9Y2Z0 365 aa20.05■□□□□ 0.8
RNF40-205ENST00000563909 DOCK3Q8IZD9 2030 aa20.04■□□□□ 0.8
RNF40-205ENST00000563909 LRRC26Q2I0M4 334 aa20.04■□□□□ 0.8
RNF40-205ENST00000563909 LBHD1Q9BQE6 289 aaPredicted RBP20.04■□□□□ 0.8
RNF40-205ENST00000563909 RAPGEFL1Q9UHV5 662 aa20.04■□□□□ 0.8
RNF40-205ENST00000563909 GJD2Q9UKL4 321 aa20.04■□□□□ 0.8
RNF40-205ENST00000563909 COL2A1P02458 1487 aaPredicted RBP20.04■□□□□ 0.8
RNF40-205ENST00000563909 TRIM75PA6NK02 468 aa20.03■□□□□ 0.8
RNF40-205ENST00000563909 PHF20L1A8MW92 1017 aa20.03■□□□□ 0.8
RNF40-205ENST00000563909 COL6A1P12109 1028 aa20.03■□□□□ 0.8
RNF40-205ENST00000563909 FAM110CQ1W6H9 321 aa20.03■□□□□ 0.8
RNF40-205ENST00000563909 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
RNF40-205ENST00000563909 CDC42EP5Q6NZY7 148 aa20.03■□□□□ 0.8
RNF40-205ENST00000563909 AK9Q5TCS8 1911 aa20.03■□□□□ 0.8
RNF40-205ENST00000563909 ZFPM1Q8IX07 1006 aa20.02■□□□□ 0.8
RNF40-205ENST00000563909 SEMA6BQ9H3T3 888 aa20.02■□□□□ 0.8
RNF40-205ENST00000563909 FAM198AQ9UFP1 575 aa20.02■□□□□ 0.8
RNF40-205ENST00000563909 CDH23Q9H251 3354 aa20.02■□□□□ 0.8
RNF40-205ENST00000563909 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.79
RNF40-205ENST00000563909 AGTPBP1Q9UPW5 1226 aa20.01■□□□□ 0.79
RNF40-205ENST00000563909 PRKAR2AP13861 404 aaKnown RBP20■□□□□ 0.79
RNF40-205ENST00000563909 TREML2Q5T2D2 321 aa20■□□□□ 0.79
RNF40-205ENST00000563909 MYLIPQ8WY64 445 aa20■□□□□ 0.79
RNF40-205ENST00000563909 TRIB2Q92519 343 aa20■□□□□ 0.79
RNF40-205ENST00000563909 USP40Q9NVE5 1235 aa20■□□□□ 0.79
RNF40-205ENST00000563909 PNMA3Q9UL41 463 aa20■□□□□ 0.79
RNF40-205ENST00000563909 DAGLAQ9Y4D2 1042 aa20■□□□□ 0.79
RNF40-205ENST00000563909 LRRFIP2Q9Y608 721 aaKnown RBP20■□□□□ 0.79
RNF40-205ENST00000563909 GRM8O00222 908 aa19.99■□□□□ 0.79
RNF40-205ENST00000563909 DIXDC1Q155Q3 683 aa19.99■□□□□ 0.79
RNF40-205ENST00000563909 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
RNF40-205ENST00000563909 BEND3Q5T5X7 828 aa19.99■□□□□ 0.79
RNF40-205ENST00000563909 MAP3K21Q5TCX8 1036 aa19.99■□□□□ 0.79
RNF40-205ENST00000563909 F6X3S4 739 aa19.98■□□□□ 0.79
RNF40-205ENST00000563909 TNFRSF10AO00220 468 aa19.98■□□□□ 0.79
RNF40-205ENST00000563909 CYP2B6P20813 491 aa19.98■□□□□ 0.79
RNF40-205ENST00000563909 GCLCP48506 637 aaPredicted RBP19.98■□□□□ 0.79
RNF40-205ENST00000563909 ATRNL1Q5VV63 1379 aa19.97■□□□□ 0.79
RNF40-205ENST00000563909 METTL24Q5JXM2 366 aa19.97■□□□□ 0.79
RNF40-205ENST00000563909 C9orf78Q9NZ63 289 aaPredicted RBP19.97■□□□□ 0.79
RNF40-205ENST00000563909 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.97■□□□□ 0.79
RNF40-205ENST00000563909 CTNND1O60716 968 aaKnown RBP19.96■□□□□ 0.79
RNF40-205ENST00000563909 FOSL2P15408 326 aa19.96■□□□□ 0.79
RNF40-205ENST00000563909 PLA2G5P39877 138 aa19.96■□□□□ 0.79
RNF40-205ENST00000563909 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
RNF40-205ENST00000563909 PDE8BO95263 885 aa19.95■□□□□ 0.78
RNF40-205ENST00000563909 CCDC27Q2M243 656 aa19.95■□□□□ 0.78
RNF40-205ENST00000563909 LRRC24Q50LG9 513 aa19.95■□□□□ 0.78
RNF40-205ENST00000563909 LHX8Q68G74 356 aa19.95■□□□□ 0.78
RNF40-205ENST00000563909 ZSCAN29Q8IWY8 852 aaPredicted RBP19.95■□□□□ 0.78
RNF40-205ENST00000563909 WDR66Q8TBY9 1149 aa19.95■□□□□ 0.78
RNF40-205ENST00000563909 PTPRFP10586 1907 aa19.94■□□□□ 0.78
RNF40-205ENST00000563909 SLURP2P0DP57 97 aa19.94■□□□□ 0.78
RNF40-205ENST00000563909 RGS3P49796 1198 aa19.94■□□□□ 0.78
RNF40-205ENST00000563909 CACNB2Q08289 660 aaPredicted RBP19.94■□□□□ 0.78
RNF40-205ENST00000563909 TJAP1Q5JTD0 557 aa19.94■□□□□ 0.78
RNF40-205ENST00000563909 FAM122AQ96E09 287 aa19.94■□□□□ 0.78
RNF40-205ENST00000563909 TTYH1Q9H313 450 aaPredicted RBP19.94■□□□□ 0.78
RNF40-205ENST00000563909 MAP3K10Q02779 954 aa19.93■□□□□ 0.78
RNF40-205ENST00000563909 SHHQ15465 462 aa19.93■□□□□ 0.78
RNF40-205ENST00000563909 VGLL2Q8N8G2 317 aa19.93■□□□□ 0.78
RNF40-205ENST00000563909 PROCA1Q8NCQ7 364 aaPredicted RBP19.93■□□□□ 0.78
RNF40-205ENST00000563909 SENP6Q9GZR1 1112 aaPredicted RBP19.93■□□□□ 0.78
RNF40-205ENST00000563909 PRKAG2Q9UGJ0 569 aa19.93■□□□□ 0.78
RNF40-205ENST00000563909 XRCC5P13010 732 aaKnown RBP19.92■□□□□ 0.78
RNF40-205ENST00000563909 CCND3P30281 292 aaPredicted RBP19.92■□□□□ 0.78
RNF40-205ENST00000563909 PABPC4Q13310 644 aaKnown RBP eCLIP19.92■□□□□ 0.78
RNF40-205ENST00000563909 SH3BP5LQ7L8J4 393 aa19.92■□□□□ 0.78
RNF40-205ENST00000563909 WWC1Q8IX03 1113 aa19.92■□□□□ 0.78
RNF40-205ENST00000563909 NUDT12Q9BQG2 462 aa19.92■□□□□ 0.78
RNF40-205ENST00000563909 ASCC2Q9H1I8 757 aaPredicted RBP19.92■□□□□ 0.78
RNF40-205ENST00000563909 ENTPD3O75355 529 aa19.91■□□□□ 0.78
RNF40-205ENST00000563909 IFIT1P09914 478 aaKnown RBP19.91■□□□□ 0.78
RNF40-205ENST00000563909 ZKSCAN1P17029 563 aaPredicted RBP19.91■□□□□ 0.78
RNF40-205ENST00000563909 SPP2Q13103 211 aa19.91■□□□□ 0.78
RNF40-205ENST00000563909 KAZALD1Q96I82 304 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms