RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 MRIQ9BWK5 157 aa22.89■■□□□ 1.25
E4F1-203ENST00000563643 CCDC27Q2M243 656 aa22.88■■□□□ 1.25
E4F1-203ENST00000563643 CCDC57Q2TAC2 916 aa22.88■■□□□ 1.25
E4F1-203ENST00000563643 FAM9BQ8IZU0 186 aa22.88■■□□□ 1.25
E4F1-203ENST00000563643 ZHX2Q9Y6X8 837 aa22.88■■□□□ 1.25
E4F1-203ENST00000563643 CCER2I3L3R5 266 aa22.87■■□□□ 1.25
E4F1-203ENST00000563643 LMBR1LQ6UX01 489 aa22.87■■□□□ 1.25
E4F1-203ENST00000563643 MAST3O60307 1309 aa22.86■■□□□ 1.25
E4F1-203ENST00000563643 PLA2G5P39877 138 aa22.86■■□□□ 1.25
E4F1-203ENST00000563643 TCP10Q12799 353 aa22.86■■□□□ 1.25
E4F1-203ENST00000563643 DIEXFQ68CQ4 756 aaKnown RBP22.86■■□□□ 1.25
E4F1-203ENST00000563643 VPS37DQ86XT2 251 aa22.86■■□□□ 1.25
E4F1-203ENST00000563643 DNAH12Q6ZR08 3092 aa22.85■■□□□ 1.25
E4F1-203ENST00000563643 FRAT2O75474 233 aaPredicted RBP22.85■■□□□ 1.25
E4F1-203ENST00000563643 COL6A1P12109 1028 aa22.85■■□□□ 1.25
E4F1-203ENST00000563643 FAM110CQ1W6H9 321 aa22.85■■□□□ 1.25
E4F1-203ENST00000563643 LRRC26Q2I0M4 334 aa22.85■■□□□ 1.25
E4F1-203ENST00000563643 DNAAF4Q8WXU2 420 aa22.85■■□□□ 1.25
E4F1-203ENST00000563643 HHIPL2Q6UWX4 724 aa22.84■■□□□ 1.25
E4F1-203ENST00000563643 FBXO33Q7Z6M2 555 aa22.84■■□□□ 1.25
E4F1-203ENST00000563643 SCYL3Q8IZE3 742 aa22.84■■□□□ 1.25
E4F1-203ENST00000563643 PICK1Q9NRD5 415 aa22.84■■□□□ 1.25
E4F1-203ENST00000563643 AFG3L2Q9Y4W6 797 aa22.84■■□□□ 1.25
E4F1-203ENST00000563643 DOCK3Q8IZD9 2030 aa22.83■■□□□ 1.25
E4F1-203ENST00000563643 TNFRSF10AO00220 468 aa22.83■■□□□ 1.25
E4F1-203ENST00000563643 SLC4A2P04920 1241 aa22.83■■□□□ 1.25
E4F1-203ENST00000563643 PTPRAP18433 802 aa22.83■■□□□ 1.25
E4F1-203ENST00000563643 EPHA10Q5JZY3 1008 aa22.83■■□□□ 1.25
E4F1-203ENST00000563643 WWC1Q8IX03 1113 aa22.83■■□□□ 1.25
E4F1-203ENST00000563643 MYLIPQ8WY64 445 aa22.83■■□□□ 1.25
E4F1-203ENST00000563643 LBHD1Q9BQE6 289 aaPredicted RBP22.83■■□□□ 1.25
E4F1-203ENST00000563643 SEMA6BQ9H3T3 888 aa22.83■■□□□ 1.25
E4F1-203ENST00000563643 NFIAQ12857 509 aa22.82■■□□□ 1.24
E4F1-203ENST00000563643 FLIIQ13045 1269 aa22.82■■□□□ 1.24
E4F1-203ENST00000563643 TRIB2Q92519 343 aa22.82■■□□□ 1.24
E4F1-203ENST00000563643 GJD2Q9UKL4 321 aa22.82■■□□□ 1.24
E4F1-203ENST00000563643 AGTPBP1Q9UPW5 1226 aa22.82■■□□□ 1.24
E4F1-203ENST00000563643 SUGT1Q9Y2Z0 365 aa22.82■■□□□ 1.24
E4F1-203ENST00000563643 FKBP5Q13451 457 aaPredicted RBP22.81■■□□□ 1.24
E4F1-203ENST00000563643 ATRNL1Q5VV63 1379 aa22.8■■□□□ 1.24
E4F1-203ENST00000563643 PHF20L1A8MW92 1017 aa22.8■■□□□ 1.24
E4F1-203ENST00000563643 PRKAR2AP13861 404 aaKnown RBP22.8■■□□□ 1.24
E4F1-203ENST00000563643 MAP3K21Q5TCX8 1036 aa22.8■■□□□ 1.24
E4F1-203ENST00000563643 FAM122AQ96E09 287 aa22.8■■□□□ 1.24
E4F1-203ENST00000563643 PUS3Q9BZE2 481 aaKnown RBP22.8■■□□□ 1.24
E4F1-203ENST00000563643 TRIM75PA6NK02 468 aa22.79■■□□□ 1.24
E4F1-203ENST00000563643 FOSL2P15408 326 aa22.79■■□□□ 1.24
E4F1-203ENST00000563643 CAVIN4Q5BKX8 364 aa22.79■■□□□ 1.24
E4F1-203ENST00000563643 TJAP1Q5JTD0 557 aa22.79■■□□□ 1.24
E4F1-203ENST00000563643 CDC42EP5Q6NZY7 148 aa22.79■■□□□ 1.24
E4F1-203ENST00000563643 FAM198AQ9UFP1 575 aa22.79■■□□□ 1.24
E4F1-203ENST00000563643 PNMA3Q9UL41 463 aa22.79■■□□□ 1.24
E4F1-203ENST00000563643 TREML2Q5T2D2 321 aa22.78■■□□□ 1.24
E4F1-203ENST00000563643 TTYH1Q9H313 450 aaPredicted RBP22.78■■□□□ 1.24
E4F1-203ENST00000563643 IL16Q14005 1332 aa22.78■■□□□ 1.24
E4F1-203ENST00000563643 PTPRFP10586 1907 aa22.77■■□□□ 1.24
E4F1-203ENST00000563643 DAGLAQ9Y4D2 1042 aa22.77■■□□□ 1.24
E4F1-203ENST00000563643 TSR2Q969E8 191 aaKnown RBP22.76■■□□□ 1.23
E4F1-203ENST00000563643 MROH5Q6ZUA9 1318 aa22.76■■□□□ 1.23
E4F1-203ENST00000563643 AK9Q5TCS8 1911 aa22.75■■□□□ 1.23
E4F1-203ENST00000563643 TMEM265A0A087WTH1 108 aa22.75■■□□□ 1.23
E4F1-203ENST00000563643 GCLCP48506 637 aaPredicted RBP22.75■■□□□ 1.23
E4F1-203ENST00000563643 ZFPM1Q8IX07 1006 aa22.75■■□□□ 1.23
E4F1-203ENST00000563643 CYP2B6P20813 491 aa22.74■■□□□ 1.23
E4F1-203ENST00000563643 TWISTNBQ3B726 338 aaPredicted RBP22.74■■□□□ 1.23
E4F1-203ENST00000563643 WDR63Q8IWG1 891 aa22.74■■□□□ 1.23
E4F1-203ENST00000563643 SALL2Q9Y467 1007 aaPredicted RBP22.74■■□□□ 1.23
E4F1-203ENST00000563643 SHHQ15465 462 aa22.73■■□□□ 1.23
E4F1-203ENST00000563643 DIXDC1Q155Q3 683 aa22.73■■□□□ 1.23
E4F1-203ENST00000563643 LHX8Q68G74 356 aa22.73■■□□□ 1.23
E4F1-203ENST00000563643 CCDC84Q86UT8 332 aaPredicted RBP22.73■■□□□ 1.23
E4F1-203ENST00000563643 MIER1Q8N108 512 aa22.73■■□□□ 1.23
E4F1-203ENST00000563643 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.73■■□□□ 1.23
E4F1-203ENST00000563643 LRRFIP2Q9Y608 721 aaKnown RBP22.73■■□□□ 1.23
E4F1-203ENST00000563643 MAST2Q6P0Q8 1798 aa22.73■■□□□ 1.23
E4F1-203ENST00000563643 HOXD11P31277 338 aaPredicted RBP22.72■■□□□ 1.23
E4F1-203ENST00000563643 SMAD3P84022 425 aaKnown RBP22.72■■□□□ 1.23
E4F1-203ENST00000563643 BEND3Q5T5X7 828 aa22.72■■□□□ 1.23
E4F1-203ENST00000563643 PLXNB2O15031 1838 aa22.71■■□□□ 1.23
E4F1-203ENST00000563643 DOCK2Q92608 1830 aa22.71■■□□□ 1.23
E4F1-203ENST00000563643 GRM8O00222 908 aa22.71■■□□□ 1.23
E4F1-203ENST00000563643 CTNND1O60716 968 aaKnown RBP22.71■■□□□ 1.23
E4F1-203ENST00000563643 CACNB2Q08289 660 aaPredicted RBP22.71■■□□□ 1.23
E4F1-203ENST00000563643 C9orf50Q5SZB4 431 aa22.71■■□□□ 1.23
E4F1-203ENST00000563643 PROCA1Q8NCQ7 364 aaPredicted RBP22.71■■□□□ 1.23
E4F1-203ENST00000563643 USP40Q9NVE5 1235 aa22.71■■□□□ 1.23
E4F1-203ENST00000563643 PRKAG2Q9UGJ0 569 aa22.71■■□□□ 1.23
E4F1-203ENST00000563643 PHIPQ8WWQ0 1821 aa22.71■■□□□ 1.23
E4F1-203ENST00000563643 DOCK1Q14185 1865 aa22.71■■□□□ 1.23
E4F1-203ENST00000563643 XRCC5P13010 732 aaKnown RBP22.7■■□□□ 1.22
E4F1-203ENST00000563643 CCND3P30281 292 aaPredicted RBP22.7■■□□□ 1.22
E4F1-203ENST00000563643 USP38Q8NB14 1042 aa22.7■■□□□ 1.22
E4F1-203ENST00000563643 SPINK5Q9NQ38 1064 aaPredicted RBP22.7■■□□□ 1.22
E4F1-203ENST00000563643 BDP1A6H8Y1 2624 aa22.69■■□□□ 1.22
E4F1-203ENST00000563643 ZKSCAN1P17029 563 aaPredicted RBP22.69■■□□□ 1.22
E4F1-203ENST00000563643 MAP3K10Q02779 954 aa22.69■■□□□ 1.22
E4F1-203ENST00000563643 METTL24Q5JXM2 366 aa22.69■■□□□ 1.22
E4F1-203ENST00000563643 VGLL2Q8N8G2 317 aa22.69■■□□□ 1.22
E4F1-203ENST00000563643 SOCS4Q8WXH5 440 aa22.69■■□□□ 1.22
E4F1-203ENST00000563643 SENP6Q9GZR1 1112 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms