RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 ABCF2Q9UG63 623 aa20.84■□□□□ 0.93
HDGFL3-203ENST00000563404 DOCK2Q92608 1830 aa20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 CXCL11O14625 94 aa20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 CYP2C8P10632 490 aa20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 OSBPP22059 807 aa20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 BTDP43251 543 aa20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 HABP4Q5JVS0 413 aaKnown RBP20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 DZIP1Q86YF9 867 aaKnown RBP20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 SCYL3Q8IZE3 742 aa20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 GCC1Q96CN9 775 aa20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 SRRDQ9UH36 339 aa20.83■□□□□ 0.93
HDGFL3-203ENST00000563404 GNAI3P08754 354 aa20.82■□□□□ 0.92
HDGFL3-203ENST00000563404 PTPRAP18433 802 aa20.82■□□□□ 0.92
HDGFL3-203ENST00000563404 PRMT2P55345 433 aa20.82■□□□□ 0.92
HDGFL3-203ENST00000563404 MTFR1Q15390 333 aa20.82■□□□□ 0.92
HDGFL3-203ENST00000563404 AFG3L2Q9Y4W6 797 aa20.82■□□□□ 0.92
HDGFL3-203ENST00000563404 ZHX2Q9Y6X8 837 aa20.82■□□□□ 0.92
HDGFL3-203ENST00000563404 MROH7-TTC4A0A0A0MT08 1334 aa20.81■□□□□ 0.92
HDGFL3-203ENST00000563404 A0A0G2JLL6 359 aaPredicted RBP20.81■□□□□ 0.92
HDGFL3-203ENST00000563404 BCRP11274 1271 aa20.81■□□□□ 0.92
HDGFL3-203ENST00000563404 MECOMQ03112 1051 aa20.81■□□□□ 0.92
HDGFL3-203ENST00000563404 PICALMQ13492 652 aa20.81■□□□□ 0.92
HDGFL3-203ENST00000563404 PI16Q6UXB8 463 aa20.81■□□□□ 0.92
HDGFL3-203ENST00000563404 PRRT2Q7Z6L0 340 aaPredicted RBP20.81■□□□□ 0.92
HDGFL3-203ENST00000563404 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.81■□□□□ 0.92
HDGFL3-203ENST00000563404 FMNL1O95466 1100 aaPredicted RBP20.8■□□□□ 0.92
HDGFL3-203ENST00000563404 RHBDL3P58872 404 aa20.8■□□□□ 0.92
HDGFL3-203ENST00000563404 ZSCAN29Q8IWY8 852 aaPredicted RBP20.8■□□□□ 0.92
HDGFL3-203ENST00000563404 PARK7Q99497 189 aaKnown RBP20.8■□□□□ 0.92
HDGFL3-203ENST00000563404 HMG20BQ9P0W2 317 aa20.8■□□□□ 0.92
HDGFL3-203ENST00000563404 AKAP2Q9Y2D5 859 aa20.8■□□□□ 0.92
HDGFL3-203ENST00000563404 GPR75-ASB3A0A0A6YYF3 556 aa20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 CCER2I3L3R5 266 aa20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 TRIM27P14373 513 aa20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 MVPQ14764 893 aaKnown RBP20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 SPTY2D1Q68D10 685 aaPredicted RBP20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 CCDC84Q86UT8 332 aaPredicted RBP20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 SLF2Q8IX21 1173 aa20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 SHISA4Q96DD7 197 aa20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 NEUROD6Q96NK8 337 aa20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 PICK1Q9NRD5 415 aa20.79■□□□□ 0.92
HDGFL3-203ENST00000563404 MYPNQ86TC9 1320 aa20.78■□□□□ 0.92
HDGFL3-203ENST00000563404 PNMA6EA0A0J9YXQ4 647 aa20.78■□□□□ 0.92
HDGFL3-203ENST00000563404 BCAR3O75815 825 aa20.78■□□□□ 0.92
HDGFL3-203ENST00000563404 TBC1D9Q6ZT07 1266 aa20.78■□□□□ 0.92
HDGFL3-203ENST00000563404 ERICH6Q7L0X2 663 aa20.78■□□□□ 0.92
HDGFL3-203ENST00000563404 PHIPQ8WWQ0 1821 aa20.78■□□□□ 0.92
HDGFL3-203ENST00000563404 CTNND1O60716 968 aaKnown RBP20.77■□□□□ 0.92
HDGFL3-203ENST00000563404 HOXD10P28358 340 aa20.77■□□□□ 0.92
HDGFL3-203ENST00000563404 GRK4P32298 578 aa20.77■□□□□ 0.92
HDGFL3-203ENST00000563404 PRKCZQ05513 592 aa20.77■□□□□ 0.92
HDGFL3-203ENST00000563404 GADL1Q6ZQY3 521 aa20.77■□□□□ 0.92
HDGFL3-203ENST00000563404 FASTKD5Q7L8L6 764 aaKnown RBP20.77■□□□□ 0.92
HDGFL3-203ENST00000563404 RAET1EQ8TD07 263 aa20.77■□□□□ 0.92
HDGFL3-203ENST00000563404 NSUN4Q96CB9 384 aaKnown RBP20.77■□□□□ 0.92
HDGFL3-203ENST00000563404 GABRQQ9UN88 632 aa20.77■□□□□ 0.92
HDGFL3-203ENST00000563404 DOCK1Q14185 1865 aa20.76■□□□□ 0.91
HDGFL3-203ENST00000563404 FAM196BA6NMK8 535 aa20.76■□□□□ 0.91
HDGFL3-203ENST00000563404 SPATA5Q8NB90 893 aa20.76■□□□□ 0.91
HDGFL3-203ENST00000563404 PTPRFP10586 1907 aa20.76■□□□□ 0.91
HDGFL3-203ENST00000563404 TRIM75PA6NK02 468 aa20.75■□□□□ 0.91
HDGFL3-203ENST00000563404 GNAI2P04899 355 aa20.75■□□□□ 0.91
HDGFL3-203ENST00000563404 ARID4AP29374 1257 aaPredicted RBP20.75■□□□□ 0.91
HDGFL3-203ENST00000563404 ATF7IPQ6VMQ6 1270 aa20.75■□□□□ 0.91
HDGFL3-203ENST00000563404 MGAMO43451 1857 aa20.74■□□□□ 0.91
HDGFL3-203ENST00000563404 TBC1D12O60347 775 aa20.74■□□□□ 0.91
HDGFL3-203ENST00000563404 NPM3O75607 178 aaKnown RBP20.74■□□□□ 0.91
HDGFL3-203ENST00000563404 MCAMP43121 646 aa20.74■□□□□ 0.91
HDGFL3-203ENST00000563404 FCGRTP55899 365 aa20.74■□□□□ 0.91
HDGFL3-203ENST00000563404 FRAT1Q92837 279 aaPredicted RBP20.74■□□□□ 0.91
HDGFL3-203ENST00000563404 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
HDGFL3-203ENST00000563404 SLC45A1Q9Y2W3 748 aa20.74■□□□□ 0.91
HDGFL3-203ENST00000563404 IPO8O15397 1037 aaKnown RBP20.73■□□□□ 0.91
HDGFL3-203ENST00000563404 CCL5P13501 91 aa20.73■□□□□ 0.91
HDGFL3-203ENST00000563404 RRP1BQ14684 758 aaKnown RBP20.73■□□□□ 0.91
HDGFL3-203ENST00000563404 COLQQ9Y215 455 aaPredicted RBP20.73■□□□□ 0.91
HDGFL3-203ENST00000563404 H0YGN5 161 aa20.72■□□□□ 0.91
HDGFL3-203ENST00000563404 G3BP1Q13283 466 aaKnown RBP eCLIP20.72■□□□□ 0.91
HDGFL3-203ENST00000563404 TREML2Q5T2D2 321 aa20.72■□□□□ 0.91
HDGFL3-203ENST00000563404 GORABQ5T7V8 394 aa20.72■□□□□ 0.91
HDGFL3-203ENST00000563404 UBE2Q1Q7Z7E8 422 aa20.72■□□□□ 0.91
HDGFL3-203ENST00000563404 OSBPL5Q9H0X9 879 aaPredicted RBP20.72■□□□□ 0.91
HDGFL3-203ENST00000563404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.72■□□□□ 0.91
HDGFL3-203ENST00000563404 RAI14Q9P0K7 980 aa20.72■□□□□ 0.91
HDGFL3-203ENST00000563404 AGTPBP1Q9UPW5 1226 aa20.72■□□□□ 0.91
HDGFL3-203ENST00000563404 LDHCP07864 332 aa20.71■□□□□ 0.91
HDGFL3-203ENST00000563404 GJB1P08034 283 aa20.71■□□□□ 0.91
HDGFL3-203ENST00000563404 GJA8P48165 433 aa20.71■□□□□ 0.91
HDGFL3-203ENST00000563404 FXR1P51114 621 aaKnown RBP eCLIP20.71■□□□□ 0.91
HDGFL3-203ENST00000563404 GSTO1P78417 241 aa20.71■□□□□ 0.91
HDGFL3-203ENST00000563404 TMEM57Q8N5G2 664 aa20.71■□□□□ 0.91
HDGFL3-203ENST00000563404 COL2A1P02458 1487 aaPredicted RBP20.7■□□□□ 0.9
HDGFL3-203ENST00000563404 FLT3LGP49771 235 aa20.7■□□□□ 0.9
HDGFL3-203ENST00000563404 SLAIN1Q8ND83 568 aa20.7■□□□□ 0.9
HDGFL3-203ENST00000563404 SH3RF3Q8TEJ3 882 aaPredicted RBP20.7■□□□□ 0.9
HDGFL3-203ENST00000563404 RNF208Q9H0X6 261 aa20.7■□□□□ 0.9
HDGFL3-203ENST00000563404 UNC93B1Q9H1C4 597 aa20.7■□□□□ 0.9
HDGFL3-203ENST00000563404 BIN2Q9UBW5 565 aaPredicted RBP20.7■□□□□ 0.9
HDGFL3-203ENST00000563404 CEP290O15078 2479 aa20.7■□□□□ 0.9
HDGFL3-203ENST00000563404 ADCY3O60266 1144 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms