RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 VGLL4Q14135 290 aa12.7□□□□□ -0.38
SNX29-202ENST00000563308 LRRC24Q50LG9 513 aa12.7□□□□□ -0.38
SNX29-202ENST00000563308 TDRD7Q8NHU6 1098 aaKnown RBP12.7□□□□□ -0.38
SNX29-202ENST00000563308 HMX1Q9NP08 348 aaPredicted RBP12.7□□□□□ -0.38
SNX29-202ENST00000563308 LAMA2P24043 3122 aaKnown RBP12.69□□□□□ -0.38
SNX29-202ENST00000563308 TNPO2O14787 897 aaKnown RBP12.69□□□□□ -0.38
SNX29-202ENST00000563308 IRF5Q13568 498 aa12.69□□□□□ -0.38
SNX29-202ENST00000563308 RASA3Q14644 834 aa12.69□□□□□ -0.38
SNX29-202ENST00000563308 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.69□□□□□ -0.38
SNX29-202ENST00000563308 ERO1BQ86YB8 467 aa12.69□□□□□ -0.38
SNX29-202ENST00000563308 VGLL2Q8N8G2 317 aa12.69□□□□□ -0.38
SNX29-202ENST00000563308 KLHDC4Q8TBB5 520 aa12.69□□□□□ -0.38
SNX29-202ENST00000563308 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
SNX29-202ENST00000563308 MROH5Q6ZUA9 1318 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 SPDYE5A6NIY4 337 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 F8W031 263 aaPredicted RBP12.68□□□□□ -0.38
SNX29-202ENST00000563308 PDHXO00330 501 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 HIBADHP31937 336 aaKnown RBP12.68□□□□□ -0.38
SNX29-202ENST00000563308 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
SNX29-202ENST00000563308 PDE3AQ14432 1141 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 AAK1Q2M2I8 961 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 FBXO33Q7Z6M2 555 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 COA7Q96BR5 231 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 PRMT6Q96LA8 375 aaPredicted RBP12.68□□□□□ -0.38
SNX29-202ENST00000563308 PARK7Q99497 189 aaKnown RBP12.68□□□□□ -0.38
SNX29-202ENST00000563308 EPHX3Q9H6B9 360 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 SMC4Q9NTJ3 1288 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 BDP1A6H8Y1 2624 aa12.68□□□□□ -0.38
SNX29-202ENST00000563308 GPR37L1O60883 481 aa12.67□□□□□ -0.38
SNX29-202ENST00000563308 RBM5P52756 815 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNX29-202ENST00000563308 SHHQ15465 462 aa12.67□□□□□ -0.38
SNX29-202ENST00000563308 CFAP100Q494V2 611 aa12.67□□□□□ -0.38
SNX29-202ENST00000563308 ANKRD23Q86SG2 305 aa12.67□□□□□ -0.38
SNX29-202ENST00000563308 KCNH4Q9UQ05 1017 aa12.67□□□□□ -0.38
SNX29-202ENST00000563308 PDE8BO95263 885 aa12.66□□□□□ -0.38
SNX29-202ENST00000563308 CT47B1P0C2W7 299 aaPredicted RBP12.66□□□□□ -0.38
SNX29-202ENST00000563308 GRIN2CQ14957 1233 aa12.66□□□□□ -0.38
SNX29-202ENST00000563308 GRIK5Q16478 980 aa12.66□□□□□ -0.38
SNX29-202ENST00000563308 MFSD14BQ5SR56 506 aa12.66□□□□□ -0.38
SNX29-202ENST00000563308 NECAB3Q96P71 396 aaPredicted RBP12.66□□□□□ -0.38
SNX29-202ENST00000563308 OTOFQ9HC10 1997 aa12.66□□□□□ -0.38
SNX29-202ENST00000563308 MGAMO43451 1857 aa12.65□□□□□ -0.38
SNX29-202ENST00000563308 SMIM22K7EJ46 135 aa12.65□□□□□ -0.38
SNX29-202ENST00000563308 IRF6O14896 467 aa12.65□□□□□ -0.38
SNX29-202ENST00000563308 FGFR2P21802 821 aa12.65□□□□□ -0.38
SNX29-202ENST00000563308 PPIL2Q13356 520 aa12.65□□□□□ -0.38
SNX29-202ENST00000563308 METTL24Q5JXM2 366 aa12.65□□□□□ -0.38
SNX29-202ENST00000563308 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
SNX29-202ENST00000563308 NOB1Q9ULX3 412 aaKnown RBP12.65□□□□□ -0.38
SNX29-202ENST00000563308 HMGCRP04035 888 aa12.64□□□□□ -0.39
SNX29-202ENST00000563308 TNNI2P48788 182 aa12.64□□□□□ -0.39
SNX29-202ENST00000563308 RARSP54136 660 aaKnown RBP12.64□□□□□ -0.39
SNX29-202ENST00000563308 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
SNX29-202ENST00000563308 SERPINA10Q9UK55 444 aa12.64□□□□□ -0.39
SNX29-202ENST00000563308 OGDHLQ9ULD0 1010 aa12.64□□□□□ -0.39
SNX29-202ENST00000563308 IQSEC3Q9UPP2 1182 aaPredicted RBP12.64□□□□□ -0.39
SNX29-202ENST00000563308 ECM29Q5VYK3 1845 aa12.63□□□□□ -0.39
SNX29-202ENST00000563308 EYA2O00167 538 aa12.63□□□□□ -0.39
SNX29-202ENST00000563308 CCDC85BQ15834 202 aaPredicted RBP12.63□□□□□ -0.39
SNX29-202ENST00000563308 LRRC26Q2I0M4 334 aa12.63□□□□□ -0.39
SNX29-202ENST00000563308 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
SNX29-202ENST00000563308 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.63□□□□□ -0.39
SNX29-202ENST00000563308 TTF2Q9UNY4 1162 aaKnown RBP12.63□□□□□ -0.39
SNX29-202ENST00000563308 PFASO15067 1338 aa12.62□□□□□ -0.39
SNX29-202ENST00000563308 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
SNX29-202ENST00000563308 NHLH1Q02575 133 aa12.62□□□□□ -0.39
SNX29-202ENST00000563308 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
SNX29-202ENST00000563308 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
SNX29-202ENST00000563308 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.62□□□□□ -0.39
SNX29-202ENST00000563308 HOOK2Q96ED9 719 aa12.62□□□□□ -0.39
SNX29-202ENST00000563308 TEPSINQ96N21 525 aa12.62□□□□□ -0.39
SNX29-202ENST00000563308 UIMC1Q96RL1 719 aa12.62□□□□□ -0.39
SNX29-202ENST00000563308 API5Q9BZZ5 524 aaKnown RBP12.62□□□□□ -0.39
SNX29-202ENST00000563308 ZNF70Q9UC06 446 aaPredicted RBP12.62□□□□□ -0.39
SNX29-202ENST00000563308 TCF20Q9UGU0 1960 aaKnown RBP12.61□□□□□ -0.39
SNX29-202ENST00000563308 FAM86C2PA6NEL3 165 aa12.61□□□□□ -0.39
SNX29-202ENST00000563308 BCRP11274 1271 aa12.61□□□□□ -0.39
SNX29-202ENST00000563308 CRKP46108 304 aa12.61□□□□□ -0.39
SNX29-202ENST00000563308 CHAF1AQ13111 956 aaPredicted RBP12.61□□□□□ -0.39
SNX29-202ENST00000563308 PUM3Q15397 648 aaKnown RBP12.61□□□□□ -0.39
SNX29-202ENST00000563308 C9orf50Q5SZB4 431 aa12.61□□□□□ -0.39
SNX29-202ENST00000563308 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
SNX29-202ENST00000563308 WRNIP1Q96S55 665 aa12.61□□□□□ -0.39
SNX29-202ENST00000563308 MEIS3Q99687 375 aa12.61□□□□□ -0.39
SNX29-202ENST00000563308 ZNF576Q9H609 170 aa12.61□□□□□ -0.39
SNX29-202ENST00000563308 TDRD3Q9H7E2 651 aaKnown RBP12.61□□□□□ -0.39
SNX29-202ENST00000563308 LRRFIP2Q9Y608 721 aaKnown RBP12.61□□□□□ -0.39
SNX29-202ENST00000563308 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
SNX29-202ENST00000563308 ST18O60284 1047 aa12.6□□□□□ -0.39
SNX29-202ENST00000563308 UBTFL1P0CB47 393 aaPredicted RBP12.6□□□□□ -0.39
SNX29-202ENST00000563308 IGFBP4P22692 258 aa12.6□□□□□ -0.39
SNX29-202ENST00000563308 HDLBPQ00341 1268 aaKnown RBP12.6□□□□□ -0.39
SNX29-202ENST00000563308 PPATQ06203 517 aa12.6□□□□□ -0.39
SNX29-202ENST00000563308 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
SNX29-202ENST00000563308 CAVIN4Q5BKX8 364 aa12.6□□□□□ -0.39
SNX29-202ENST00000563308 VPS37DQ86XT2 251 aa12.6□□□□□ -0.39
SNX29-202ENST00000563308 TBC1D22AQ8WUA7 517 aa12.6□□□□□ -0.39
SNX29-202ENST00000563308 ARHGAP45Q92619 1136 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms