RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 KIAA0100Q14667 2235 aaKnown RBP20.25■□□□□ 0.83
CDT1-202ENST00000562747 EN2P19622 333 aaPredicted RBP20.24■□□□□ 0.83
CDT1-202ENST00000562747 TNNI2P48788 182 aa20.24■□□□□ 0.83
CDT1-202ENST00000562747 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
CDT1-202ENST00000562747 TAF1CQ15572 869 aaPredicted RBP20.24■□□□□ 0.83
CDT1-202ENST00000562747 OTUD5Q96G74 571 aa20.24■□□□□ 0.83
CDT1-202ENST00000562747 LRRCC1Q9C099 1032 aa20.24■□□□□ 0.83
CDT1-202ENST00000562747 DCTPP1Q9H773 170 aa20.24■□□□□ 0.83
CDT1-202ENST00000562747 TMOD2Q9NZR1 351 aa20.24■□□□□ 0.83
CDT1-202ENST00000562747 SNCAIPQ9Y6H5 919 aa20.24■□□□□ 0.83
CDT1-202ENST00000562747 IGSF3O75054 1194 aa20.23■□□□□ 0.83
CDT1-202ENST00000562747 IFIT2P09913 472 aaKnown RBP20.23■□□□□ 0.83
CDT1-202ENST00000562747 FKBP1CQ5VVH2 108 aa20.23■□□□□ 0.83
CDT1-202ENST00000562747 FAM163AQ96GL9 167 aaPredicted RBP20.23■□□□□ 0.83
CDT1-202ENST00000562747 SUPT16HQ9Y5B9 1047 aaKnown RBP20.23■□□□□ 0.83
CDT1-202ENST00000562747 MYH2Q9UKX2 1941 aa20.23■□□□□ 0.83
CDT1-202ENST00000562747 GAKO14976 1311 aa20.23■□□□□ 0.83
CDT1-202ENST00000562747 GTF2A2P52657 109 aa20.22■□□□□ 0.83
CDT1-202ENST00000562747 MECOMQ03112 1051 aa20.22■□□□□ 0.83
CDT1-202ENST00000562747 TBC1D9Q6ZT07 1266 aa20.22■□□□□ 0.83
CDT1-202ENST00000562747 ZNF333Q96JL9 665 aa20.22■□□□□ 0.83
CDT1-202ENST00000562747 SNRKQ9NRH2 765 aa20.22■□□□□ 0.83
CDT1-202ENST00000562747 PTCH2Q9Y6C5 1203 aa20.22■□□□□ 0.83
CDT1-202ENST00000562747 SPDYE5A6NIY4 337 aa20.21■□□□□ 0.83
CDT1-202ENST00000562747 ZAP70P43403 619 aa20.21■□□□□ 0.83
CDT1-202ENST00000562747 GSTO1P78417 241 aa20.21■□□□□ 0.83
CDT1-202ENST00000562747 FAM83AQ86UY5 434 aa20.21■□□□□ 0.83
CDT1-202ENST00000562747 NSUN4Q96CB9 384 aaKnown RBP20.21■□□□□ 0.83
CDT1-202ENST00000562747 ARHGAP39Q9C0H5 1083 aa20.21■□□□□ 0.83
CDT1-202ENST00000562747 LRP2BPQ9P2M1 347 aa20.21■□□□□ 0.83
CDT1-202ENST00000562747 CSADQ9Y600 493 aa20.21■□□□□ 0.83
CDT1-202ENST00000562747 CYP2E1P05181 493 aaPredicted RBP20.2■□□□□ 0.82
CDT1-202ENST00000562747 LDHCP07864 332 aa20.2■□□□□ 0.82
CDT1-202ENST00000562747 HABP4Q5JVS0 413 aaKnown RBP20.2■□□□□ 0.82
CDT1-202ENST00000562747 CDC42EP5Q6NZY7 148 aa20.2■□□□□ 0.82
CDT1-202ENST00000562747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDT1-202ENST00000562747 ZKSCAN4Q969J2 545 aaPredicted RBP20.2■□□□□ 0.82
CDT1-202ENST00000562747 ZFYVE28Q9HCC9 887 aa20.2■□□□□ 0.82
CDT1-202ENST00000562747 RAI14Q9P0K7 980 aa20.2■□□□□ 0.82
CDT1-202ENST00000562747 MROH7-TTC4A0A0A0MT08 1334 aa20.2■□□□□ 0.82
CDT1-202ENST00000562747 MAST2Q6P0Q8 1798 aa20.19■□□□□ 0.82
CDT1-202ENST00000562747 ZNF384Q8TF68 577 aa20.19■□□□□ 0.82
CDT1-202ENST00000562747 GCC1Q96CN9 775 aa20.19■□□□□ 0.82
CDT1-202ENST00000562747 WRNIP1Q96S55 665 aa20.19■□□□□ 0.82
CDT1-202ENST00000562747 USP40Q9NVE5 1235 aa20.18■□□□□ 0.82
CDT1-202ENST00000562747 RPAP1Q9BWH6 1393 aaPredicted RBP20.18■□□□□ 0.82
CDT1-202ENST00000562747 GPR75-ASB3A0A0A6YYF3 556 aa20.17■□□□□ 0.82
CDT1-202ENST00000562747 BTBD19C9JJ37 291 aa20.17■□□□□ 0.82
CDT1-202ENST00000562747 IRF6O14896 467 aa20.17■□□□□ 0.82
CDT1-202ENST00000562747 BTDP43251 543 aa20.17■□□□□ 0.82
CDT1-202ENST00000562747 SLC9C1Q4G0N8 1177 aa20.17■□□□□ 0.82
CDT1-202ENST00000562747 ERO1BQ86YB8 467 aa20.17■□□□□ 0.82
CDT1-202ENST00000562747 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
CDT1-202ENST00000562747 MAP4K4O95819 1239 aaPredicted RBP20.16■□□□□ 0.82
CDT1-202ENST00000562747 HDAC1Q13547 482 aaPredicted RBP20.16■□□□□ 0.82
CDT1-202ENST00000562747 NAA16Q6N069 864 aaPredicted RBP20.16■□□□□ 0.82
CDT1-202ENST00000562747 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
CDT1-202ENST00000562747 PIH1D3Q9NQM4 214 aaKnown RBP20.16■□□□□ 0.82
CDT1-202ENST00000562747 TLR2O60603 784 aa20.15■□□□□ 0.82
CDT1-202ENST00000562747 MYCP01106 439 aaPredicted RBP20.15■□□□□ 0.82
CDT1-202ENST00000562747 CETPP11597 493 aa20.15■□□□□ 0.82
CDT1-202ENST00000562747 PPIL2Q13356 520 aa20.15■□□□□ 0.82
CDT1-202ENST00000562747 TTF1Q15361 905 aaPredicted RBP20.15■□□□□ 0.82
CDT1-202ENST00000562747 TMED8Q6PL24 325 aaPredicted RBP20.15■□□□□ 0.82
CDT1-202ENST00000562747 EXOC6Q8TAG9 804 aa20.15■□□□□ 0.82
CDT1-202ENST00000562747 SH3TC2Q8TF17 1288 aa20.15■□□□□ 0.82
CDT1-202ENST00000562747 FAM151AQ8WW52 585 aa20.15■□□□□ 0.82
CDT1-202ENST00000562747 HOOK2Q96ED9 719 aa20.15■□□□□ 0.82
CDT1-202ENST00000562747 TMEM106CQ9BVX2 250 aa20.15■□□□□ 0.82
CDT1-202ENST00000562747 IDI2Q9BXS1 227 aa20.15■□□□□ 0.82
CDT1-202ENST00000562747 DOCK2Q92608 1830 aa20.14■□□□□ 0.81
CDT1-202ENST00000562747 ATP5JP18859 108 aa20.14■□□□□ 0.81
CDT1-202ENST00000562747 CTGFP29279 349 aa20.14■□□□□ 0.81
CDT1-202ENST00000562747 INPP5BP32019 993 aa20.14■□□□□ 0.81
CDT1-202ENST00000562747 LACTBP83111 547 aaPredicted RBP20.14■□□□□ 0.81
CDT1-202ENST00000562747 SNAPC2Q13487 334 aa20.14■□□□□ 0.81
CDT1-202ENST00000562747 MIGA2Q7L4E1 593 aa20.14■□□□□ 0.81
CDT1-202ENST00000562747 FAM198AQ9UFP1 575 aa20.14■□□□□ 0.81
CDT1-202ENST00000562747 MYO5AQ9Y4I1 1855 aaKnown RBP20.13■□□□□ 0.81
CDT1-202ENST00000562747 RFX7Q2KHR2 1363 aa20.13■□□□□ 0.81
CDT1-202ENST00000562747 ENTPD3O75355 529 aa20.13■□□□□ 0.81
CDT1-202ENST00000562747 IDH1O75874 414 aaKnown RBP20.13■□□□□ 0.81
CDT1-202ENST00000562747 ECM2O94769 699 aaPredicted RBP20.13■□□□□ 0.81
CDT1-202ENST00000562747 RHBDL3P58872 404 aa20.13■□□□□ 0.81
CDT1-202ENST00000562747 MAP3K12Q12852 859 aa20.13■□□□□ 0.81
CDT1-202ENST00000562747 NFIAQ12857 509 aa20.13■□□□□ 0.81
CDT1-202ENST00000562747 NOL10Q9BSC4 688 aaKnown RBP20.13■□□□□ 0.81
CDT1-202ENST00000562747 ANTXR1Q9H6X2 564 aa20.13■□□□□ 0.81
CDT1-202ENST00000562747 NDUFB9Q9Y6M9 179 aa20.13■□□□□ 0.81
CDT1-202ENST00000562747 BAG3O95817 575 aa20.12■□□□□ 0.81
CDT1-202ENST00000562747 TCP10Q12799 353 aa20.12■□□□□ 0.81
CDT1-202ENST00000562747 ZCCHC17Q9NP64 241 aaKnown RBP20.12■□□□□ 0.81
CDT1-202ENST00000562747 ADGRA2Q96PE1 1338 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 NPM3O75607 178 aaKnown RBP20.11■□□□□ 0.81
CDT1-202ENST00000562747 WDHD1O75717 1129 aaPredicted RBP20.11■□□□□ 0.81
CDT1-202ENST00000562747 PLCG2P16885 1265 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 RGS3P49796 1198 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 PPP4CP60510 307 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 ARHGEF6Q15052 776 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 SLC4A8Q2Y0W8 1093 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms