RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 ZKSCAN4Q969J2 545 aaPredicted RBP23.58■■□□□ 1.37
TMEM249-202ENST00000562477 OPTNQ96CV9 577 aa23.58■■□□□ 1.37
TMEM249-202ENST00000562477 HOOK2Q96ED9 719 aa23.58■■□□□ 1.37
TMEM249-202ENST00000562477 DNAJC2Q99543 621 aaKnown RBP23.58■■□□□ 1.37
TMEM249-202ENST00000562477 ZNF341Q9BYN7 854 aa23.58■■□□□ 1.37
TMEM249-202ENST00000562477 CSADQ9Y600 493 aa23.58■■□□□ 1.37
TMEM249-202ENST00000562477 SNCAIPQ9Y6H5 919 aa23.58■■□□□ 1.37
TMEM249-202ENST00000562477 ZBTB48P10074 688 aaPredicted RBP23.57■■□□□ 1.36
TMEM249-202ENST00000562477 CYP7A1P22680 504 aa23.57■■□□□ 1.36
TMEM249-202ENST00000562477 TM4SF4P48230 202 aa23.57■■□□□ 1.36
TMEM249-202ENST00000562477 REM2Q8IYK8 340 aaPredicted RBP23.57■■□□□ 1.36
TMEM249-202ENST00000562477 MAGEB6Q8N7X4 407 aa23.57■■□□□ 1.36
TMEM249-202ENST00000562477 GOLIM4O00461 696 aa23.56■■□□□ 1.36
TMEM249-202ENST00000562477 DYNLL1P63167 89 aaKnown RBP23.56■■□□□ 1.36
TMEM249-202ENST00000562477 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.56■■□□□ 1.36
TMEM249-202ENST00000562477 BOLA2Q9H3K6 86 aa23.56■■□□□ 1.36
TMEM249-202ENST00000562477 SAGE1Q9NXZ1 904 aa23.56■■□□□ 1.36
TMEM249-202ENST00000562477 PPP4CP60510 307 aa23.55■■□□□ 1.36
TMEM249-202ENST00000562477 SREBF2Q12772 1141 aa23.55■■□□□ 1.36
TMEM249-202ENST00000562477 TNS4Q8IZW8 715 aa23.55■■□□□ 1.36
TMEM249-202ENST00000562477 MIGA1Q8NAN2 632 aa23.55■■□□□ 1.36
TMEM249-202ENST00000562477 NOL10Q9BSC4 688 aaKnown RBP23.55■■□□□ 1.36
TMEM249-202ENST00000562477 MANSC4A6NHS7 340 aaPredicted RBP23.54■■□□□ 1.36
TMEM249-202ENST00000562477 BAG3O95817 575 aa23.54■■□□□ 1.36
TMEM249-202ENST00000562477 OTUD5Q96G74 571 aa23.54■■□□□ 1.36
TMEM249-202ENST00000562477 ZNF112Q9UJU3 913 aa23.54■■□□□ 1.36
TMEM249-202ENST00000562477 CASP8AP2Q9UKL3 1982 aa23.54■■□□□ 1.36
TMEM249-202ENST00000562477 IGF2BP3O00425 579 aaKnown RBP eCLIP23.53■■□□□ 1.36
TMEM249-202ENST00000562477 NPM3O75607 178 aaKnown RBP23.53■■□□□ 1.36
TMEM249-202ENST00000562477 TBC1D8O95759 1140 aa23.53■■□□□ 1.36
TMEM249-202ENST00000562477 MAP4K4O95819 1239 aaPredicted RBP23.53■■□□□ 1.36
TMEM249-202ENST00000562477 ATP5JP18859 108 aa23.53■■□□□ 1.36
TMEM249-202ENST00000562477 MAP3K12Q12852 859 aa23.53■■□□□ 1.36
TMEM249-202ENST00000562477 TSHZ3Q63HK5 1081 aa23.53■■□□□ 1.36
TMEM249-202ENST00000562477 TGFBRAP1Q8WUH2 860 aa23.53■■□□□ 1.36
TMEM249-202ENST00000562477 OSBPL5Q9H0X9 879 aaPredicted RBP23.53■■□□□ 1.36
TMEM249-202ENST00000562477 SUPT16HQ9Y5B9 1047 aaKnown RBP23.53■■□□□ 1.36
TMEM249-202ENST00000562477 SPDYE5A6NIY4 337 aa23.52■■□□□ 1.36
TMEM249-202ENST00000562477 MAPKAPK5Q8IW41 473 aa23.52■■□□□ 1.36
TMEM249-202ENST00000562477 MS4A4AQ96JQ5 239 aa23.52■■□□□ 1.36
TMEM249-202ENST00000562477 R3HDMLQ9H3Y0 253 aa23.52■■□□□ 1.36
TMEM249-202ENST00000562477 DOCK2Q92608 1830 aa23.52■■□□□ 1.36
TMEM249-202ENST00000562477 FAM196BA6NMK8 535 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 PHF20L1A8MW92 1017 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 IGSF3O75054 1194 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 PDE6AP16499 860 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 PLCG2P16885 1265 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 TTF1Q15361 905 aaPredicted RBP23.51■■□□□ 1.35
TMEM249-202ENST00000562477 IFNL1Q8IU54 200 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 EXOC6Q8TAG9 804 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 HAUS7Q99871 368 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 PTPN18Q99952 460 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 PAG1Q9NWQ8 432 aa23.51■■□□□ 1.35
TMEM249-202ENST00000562477 MAP3K10Q02779 954 aa23.5■■□□□ 1.35
TMEM249-202ENST00000562477 SLFNL1Q499Z3 407 aa23.5■■□□□ 1.35
TMEM249-202ENST00000562477 ERO1BQ86YB8 467 aa23.5■■□□□ 1.35
TMEM249-202ENST00000562477 BRI3BPQ8WY22 251 aa23.5■■□□□ 1.35
TMEM249-202ENST00000562477 NOL9Q5SY16 702 aaKnown RBP23.49■■□□□ 1.35
TMEM249-202ENST00000562477 SLC9C2Q5TAH2 1124 aa23.49■■□□□ 1.35
TMEM249-202ENST00000562477 OTUD7AQ8TE49 926 aaPredicted RBP23.49■■□□□ 1.35
TMEM249-202ENST00000562477 FLT1P17948 1338 aa23.49■■□□□ 1.35
TMEM249-202ENST00000562477 IRF6O14896 467 aa23.48■■□□□ 1.35
TMEM249-202ENST00000562477 CHGBP05060 677 aa23.48■■□□□ 1.35
TMEM249-202ENST00000562477 ECHDC1Q9NTX5 307 aa23.48■■□□□ 1.35
TMEM249-202ENST00000562477 SAP30BPQ9UHR5 308 aaKnown RBP23.48■■□□□ 1.35
TMEM249-202ENST00000562477 ZNF532Q9HCE3 1301 aa23.48■■□□□ 1.35
TMEM249-202ENST00000562477 COL2A1P02458 1487 aaPredicted RBP23.48■■□□□ 1.35
TMEM249-202ENST00000562477 CCL15-CCL14A0A0B4J2E2 113 aa23.47■■□□□ 1.35
TMEM249-202ENST00000562477 TCRBV5S4A2TA0A5A2 114 aa23.47■■□□□ 1.35
TMEM249-202ENST00000562477 TESPA1A2RU30 521 aaPredicted RBP23.47■■□□□ 1.35
TMEM249-202ENST00000562477 INHBEP58166 350 aa23.47■■□□□ 1.35
TMEM249-202ENST00000562477 PPIL2Q13356 520 aa23.47■■□□□ 1.35
TMEM249-202ENST00000562477 CCL15Q16663 113 aa23.47■■□□□ 1.35
TMEM249-202ENST00000562477 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.47■■□□□ 1.35
TMEM249-202ENST00000562477 GTF2A2P52657 109 aa23.46■■□□□ 1.35
TMEM249-202ENST00000562477 SLC4A8Q2Y0W8 1093 aa23.46■■□□□ 1.35
TMEM249-202ENST00000562477 CDK5RAP2Q96SN8 1893 aa23.46■■□□□ 1.35
TMEM249-202ENST00000562477 RIOK1Q9BRS2 568 aaKnown RBP23.46■■□□□ 1.35
TMEM249-202ENST00000562477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.46■■□□□ 1.35
TMEM249-202ENST00000562477 PALD1Q9ULE6 856 aa23.46■■□□□ 1.35
TMEM249-202ENST00000562477 TBC1D12O60347 775 aa23.45■■□□□ 1.34
TMEM249-202ENST00000562477 HDAC1Q13547 482 aaPredicted RBP23.45■■□□□ 1.34
TMEM249-202ENST00000562477 RRP1BQ14684 758 aaKnown RBP23.45■■□□□ 1.34
TMEM249-202ENST00000562477 SCYL3Q8IZE3 742 aa23.45■■□□□ 1.34
TMEM249-202ENST00000562477 LAMB1P07942 1786 aa23.45■■□□□ 1.34
TMEM249-202ENST00000562477 MAGEB6P1A0A0J9YX57 407 aa23.44■■□□□ 1.34
TMEM249-202ENST00000562477 PPATQ06203 517 aa23.44■■□□□ 1.34
TMEM249-202ENST00000562477 IFFO2Q5TF58 517 aa23.44■■□□□ 1.34
TMEM249-202ENST00000562477 CCDC84Q86UT8 332 aaPredicted RBP23.44■■□□□ 1.34
TMEM249-202ENST00000562477 SIPA1L1O43166 1804 aa23.43■■□□□ 1.34
TMEM249-202ENST00000562477 ALDH1A1P00352 501 aa23.43■■□□□ 1.34
TMEM249-202ENST00000562477 ADD2P35612 726 aa23.43■■□□□ 1.34
TMEM249-202ENST00000562477 USP5P45974 858 aa23.43■■□□□ 1.34
TMEM249-202ENST00000562477 IRX6P78412 446 aaPredicted RBP23.43■■□□□ 1.34
TMEM249-202ENST00000562477 SNAPC2Q13487 334 aa23.43■■□□□ 1.34
TMEM249-202ENST00000562477 ANKRD45Q5TZF3 282 aa23.43■■□□□ 1.34
TMEM249-202ENST00000562477 TMED8Q6PL24 325 aaPredicted RBP23.43■■□□□ 1.34
TMEM249-202ENST00000562477 FAM43AQ8N2R8 423 aa23.43■■□□□ 1.34
TMEM249-202ENST00000562477 ZNF296Q8WUU4 475 aaPredicted RBP23.43■■□□□ 1.34
TMEM249-202ENST00000562477 GPATCH3Q96I76 525 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms