RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 KLF18A0A0U1RQI7 1052 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 MINDY4BA8MYZ0 360 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 KDM4AO75164 1064 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 CTDNEP1O95476 244 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 DPEP1P16444 411 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 BTDP43251 543 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 RHBDL3P58872 404 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 HMGN5P82970 282 aaKnown RBP11.2□□□□□ -0.62
CDH13-205ENST00000562307 KIAA2012Q0VF49 1180 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 C12orf60Q5U649 245 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 STRIP1Q5VSL9 837 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 RTKN2Q8IZC4 609 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 TMTC2Q8N394 836 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 ESR2Q92731 530 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 VPS33BQ9H267 617 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 LY9Q9HBG7 655 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 MTMR6Q9Y217 621 aa11.2□□□□□ -0.62
CDH13-205ENST00000562307 KIF13BQ9NQT8 1826 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 DLEC1Q9Y238 1755 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 CYP2D7A0A087X1C5 515 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 G3V3G9 751 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 GOLGA6L22H0YM25 854 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 DHX16O60231 1041 aaKnown RBP11.19□□□□□ -0.62
CDH13-205ENST00000562307 JAK2O60674 1132 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 SLC3A2P08195 630 aaKnown RBP11.19□□□□□ -0.62
CDH13-205ENST00000562307 RCAN1P53805 252 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 HDLBPQ00341 1268 aaKnown RBP11.19□□□□□ -0.62
CDH13-205ENST00000562307 CCDC93Q567U6 631 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 TMEM67Q5HYA8 995 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 LARP1BQ659C4 914 aaKnown RBP11.19□□□□□ -0.62
CDH13-205ENST00000562307 HHIPL2Q6UWX4 724 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 PSMD1Q99460 953 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
CDH13-205ENST00000562307 NID2Q14112 1375 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 ROBO3Q96MS0 1386 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 CHD4Q14839 1912 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 SMIM22K7EJ46 135 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 IFIT3O14879 490 aaKnown RBP11.18□□□□□ -0.62
CDH13-205ENST00000562307 C21orf2O43822 256 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 ECE2O60344 883 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 F13A1P00488 732 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 POLD1P28340 1107 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 USP5P45974 858 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 CCT2P78371 535 aaKnown RBP11.18□□□□□ -0.62
CDH13-205ENST00000562307 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
CDH13-205ENST00000562307 SEC23AQ15436 765 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 SKOR2Q2VWA4 1001 aaPredicted RBP11.18□□□□□ -0.62
CDH13-205ENST00000562307 DACT2Q5SW24 774 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDH13-205ENST00000562307 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 NCOA5Q9HCD5 579 aaKnown RBP11.18□□□□□ -0.62
CDH13-205ENST00000562307 MCM9Q9NXL9 1143 aa11.18□□□□□ -0.62
CDH13-205ENST00000562307 PTPDC1A2A3K4 754 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 USP17L3A6NCW0 530 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 USP17L4A6NCW7 530 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 GOLGA8BA8MQT2 603 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 ZBTB7AO95365 584 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 USP17L8P0C7I0 530 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 CYP2D6P10635 497 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 PDE4BQ07343 736 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 RRP12Q5JTH9 1297 aaKnown RBP11.17□□□□□ -0.62
CDH13-205ENST00000562307 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 USP17L1Q7RTZ2 530 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 TEX11Q8IYF3 940 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 TGFBRAP1Q8WUH2 860 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 DBNDD1Q9H9R9 158 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 SENP2Q9HC62 589 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 LMBRD1Q9NUN5 540 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
CDH13-205ENST00000562307 TTF2Q9UNY4 1162 aaKnown RBP11.17□□□□□ -0.62
CDH13-205ENST00000562307 KIF3AQ9Y496 699 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 ATP6V1DQ9Y5K8 247 aa11.17□□□□□ -0.62
CDH13-205ENST00000562307 MYH2Q9UKX2 1941 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 ERICH2A1L162 156 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 CCDC69A6NI79 296 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 ZBTB43O43298 467 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 TRAK2O60296 914 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 FDPSP14324 419 aaKnown RBP11.16□□□□□ -0.62
CDH13-205ENST00000562307 WTAPQ15007 396 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 PPP2R5BQ15173 497 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 AOC3Q16853 763 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 FOXD4L5Q5VV16 416 aaPredicted RBP11.16□□□□□ -0.62
CDH13-205ENST00000562307 MCTP1Q6DN14 999 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 AMOTL1Q8IY63 956 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 FOXD4L4Q8WXT5 416 aaPredicted RBP11.16□□□□□ -0.62
CDH13-205ENST00000562307 ZSCAN10Q96SZ4 725 aaPredicted RBP11.16□□□□□ -0.62
CDH13-205ENST00000562307 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 KCNQ5Q9NR82 932 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 TOMM22Q9NS69 142 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 FAM217BQ9NTX9 383 aaPredicted RBP11.16□□□□□ -0.62
CDH13-205ENST00000562307 PIM2Q9P1W9 311 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 ATF5Q9Y2D1 282 aaPredicted RBP11.16□□□□□ -0.62
CDH13-205ENST00000562307 SLC12A7Q9Y666 1083 aa11.16□□□□□ -0.62
CDH13-205ENST00000562307 DTNBO60941 627 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 METAP2P50579 478 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDH13-205ENST00000562307 EVX2Q03828 476 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms