RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 RTN2O75298 545 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 U2AF1L5P0DN76 240 aaPredicted RBP8.33□□□□□ -1.08
CDH1-203ENST00000561751 KCNA6P17658 529 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 U2AF1Q01081 240 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDH1-203ENST00000561751 DNM1Q05193 864 aaKnown RBP8.33□□□□□ -1.08
CDH1-203ENST00000561751 SETDB1Q15047 1291 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 PPP2R5AQ15172 486 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 FOXD4L5Q5VV16 416 aaPredicted RBP8.33□□□□□ -1.08
CDH1-203ENST00000561751 MICALCLQ6ZW33 695 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 HOMER1Q86YM7 354 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 APLFQ8IW19 511 aaPredicted RBP8.33□□□□□ -1.08
CDH1-203ENST00000561751 CEP57L1Q8IYX8 460 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 MAB21L3Q8N8X9 362 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 FOXD4L4Q8WXT5 416 aaPredicted RBP8.33□□□□□ -1.08
CDH1-203ENST00000561751 TSR2Q969E8 191 aaKnown RBP8.33□□□□□ -1.08
CDH1-203ENST00000561751 MKL1Q969V6 931 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 CHAMP1Q96JM3 812 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 CARD6Q9BX69 1037 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 SPATS2LQ9NUQ6 558 aaKnown RBP8.33□□□□□ -1.08
CDH1-203ENST00000561751 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 ETAA1Q9NY74 926 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 ATP10DQ9P241 1426 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 VPS18Q9P253 973 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 CFAP45Q9UL16 551 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 PNPLA6Q8IY17 1366 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 MINK1Q8N4C8 1332 aaPredicted RBP8.32□□□□□ -1.08
CDH1-203ENST00000561751 NSD3Q9BZ95 1437 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 RIMS2Q9UQ26 1411 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 EXOC5O00471 708 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 ARHGAP6O43182 974 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 ZEB2O60315 1214 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 URI1O94763 535 aaPredicted RBP8.32□□□□□ -1.08
CDH1-203ENST00000561751 GNAI3P08754 354 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 INPP5BP32019 993 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 AMPHP49418 695 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 SMTNP53814 917 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 PPP2R3AQ06190 1150 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 SCRN1Q12765 414 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 BIRC2Q13490 618 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 RBBP5Q15291 538 aaKnown RBP8.32□□□□□ -1.08
CDH1-203ENST00000561751 AP1ARQ63HQ0 302 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 WDR93Q6P2C0 686 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 LMOD2Q6P5Q4 547 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 SRGAP1Q7Z6B7 1085 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 TTC6Q86TZ1 520 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 AFAP1L1Q8TED9 768 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 RUBCNQ92622 972 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 CCDC102AQ96A19 550 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 AAASQ9NRG9 546 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 TRMT1Q9NXH9 659 aaKnown RBP8.32□□□□□ -1.08
CDH1-203ENST00000561751 DACT1Q9NYF0 836 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 AKAP2Q9Y2D5 859 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 TBX22Q9Y458 520 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 MAP3K5Q99683 1374 aa8.32□□□□□ -1.08
CDH1-203ENST00000561751 COL3A1P02461 1466 aaPredicted RBP8.32□□□□□ -1.08
CDH1-203ENST00000561751 CDK12Q9NYV4 1490 aaPredicted RBP8.32□□□□□ -1.08
CDH1-203ENST00000561751 RPGRIP1LQ68CZ1 1315 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 IKBKBO14920 756 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 COQ9O75208 318 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 SEC31AO94979 1220 aaKnown RBP8.31□□□□□ -1.08
CDH1-203ENST00000561751 MMP16P51512 607 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 IFFO1Q0D2I5 559 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 DCTN1Q14203 1278 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 ANKRD1Q15327 319 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 FILIP1LQ4L180 1135 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 ZC3H12AQ5D1E8 599 aaKnown RBP8.31□□□□□ -1.08
CDH1-203ENST00000561751 CEP85Q6P2H3 762 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 FAM43BQ6ZT52 329 aaPredicted RBP8.31□□□□□ -1.08
CDH1-203ENST00000561751 CNNM3Q8NE01 707 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 CCDC26Q8TAB7 109 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 FAM169AQ9Y6X4 670 aa8.31□□□□□ -1.08
CDH1-203ENST00000561751 SPATA31A6Q5VVP1 1343 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 SHTN1A0MZ66 631 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 MPHOSPH10O00566 681 aaKnown RBP8.3□□□□□ -1.08
CDH1-203ENST00000561751 STX10O60499 249 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 SLC8A1P32418 973 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 FNTAP49354 379 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 EMC10Q5UCC4 262 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 WWC2Q6AWC2 1192 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 KCNV1Q6PIU1 500 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 DHX40Q8IX18 779 aaKnown RBP8.3□□□□□ -1.08
CDH1-203ENST00000561751 C3orf20Q8ND61 904 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 LEO1Q8WVC0 666 aaPredicted RBP8.3□□□□□ -1.08
CDH1-203ENST00000561751 SPATA32Q96LK8 384 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 DNAJC25Q9H1X3 360 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 PDE11AQ9HCR9 933 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 DACH1Q9UI36 760 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 ODF2LQ9ULJ1 636 aa8.3□□□□□ -1.08
CDH1-203ENST00000561751 AHDC1Q5TGY3 1603 aaPredicted RBP8.29□□□□□ -1.08
CDH1-203ENST00000561751 PPFIA3O75145 1194 aa8.29□□□□□ -1.08
CDH1-203ENST00000561751 PRPF6O94906 941 aaKnown RBP8.29□□□□□ -1.08
CDH1-203ENST00000561751 SETSIPP0DME0 302 aa8.29□□□□□ -1.08
CDH1-203ENST00000561751 GJB2P29033 226 aa8.29□□□□□ -1.08
CDH1-203ENST00000561751 GUCA2AQ02747 115 aa8.29□□□□□ -1.08
CDH1-203ENST00000561751 PPFIA1Q13136 1202 aa8.29□□□□□ -1.08
CDH1-203ENST00000561751 SLC5A9Q2M3M2 681 aa8.29□□□□□ -1.08
CDH1-203ENST00000561751 Q3C1V9 767 aa8.29□□□□□ -1.08
CDH1-203ENST00000561751 LARP1BQ659C4 914 aaKnown RBP8.29□□□□□ -1.08
CDH1-203ENST00000561751 ZNF772Q68DY9 489 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms