RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 ATF7IPQ6VMQ6 1270 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 DZIP1LQ8IYY4 767 aaKnown RBP9.24□□□□□ -0.93
ZEB1-223ENST00000561304 DDX12PQ92771 950 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 FRAT1Q92837 279 aaPredicted RBP9.24□□□□□ -0.93
ZEB1-223ENST00000561304 CLUAP1Q96AJ1 413 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 CLMNQ96JQ2 1002 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 ZNF70Q9UC06 446 aaPredicted RBP9.24□□□□□ -0.93
ZEB1-223ENST00000561304 SERPINA10Q9UK55 444 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 ANGEL1Q9UNK9 670 aaKnown RBP9.24□□□□□ -0.93
ZEB1-223ENST00000561304 PHIPQ8WWQ0 1821 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 MYO1BO43795 1136 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 IFIT1P09914 478 aaKnown RBP9.23□□□□□ -0.93
ZEB1-223ENST00000561304 NF2P35240 595 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 CACNB3P54284 484 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 RASA3Q14644 834 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 MAP3K11Q16584 847 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 ATP2B3Q16720 1220 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 TMEM57Q8N5G2 664 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 LPIN2Q92539 896 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 ABHD8Q96I13 439 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 TEPSINQ96N21 525 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 COPRSQ9NQ92 184 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 SAGE1Q9NXZ1 904 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 PPP2R3BQ9Y5P8 575 aa9.23□□□□□ -0.93
ZEB1-223ENST00000561304 SIPA1L1O43166 1804 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 PNMA6EA0A0J9YXQ4 647 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 TCP10L2B9ZVM9 353 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 FRAT2O75474 233 aaPredicted RBP9.22□□□□□ -0.93
ZEB1-223ENST00000561304 GJA5P36382 358 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 PHKA1P46020 1223 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 MTX1Q13505 466 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 ARMC9Q7Z3E5 817 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 MCOLN1Q9GZU1 580 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 TMEM39BQ9GZU3 492 aa9.22□□□□□ -0.93
ZEB1-223ENST00000561304 DOCK1Q14185 1865 aa9.21□□□□□ -0.93
ZEB1-223ENST00000561304 ZBED9Q6R2W3 1325 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 SRGAP3O43295 1099 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 USP2O75604 605 aaPredicted RBP9.21□□□□□ -0.94
ZEB1-223ENST00000561304 RLBP1P12271 317 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 PRDX5P30044 214 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 IL15P40933 162 aaPredicted RBP9.21□□□□□ -0.94
ZEB1-223ENST00000561304 NBR1Q14596 966 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 DIXDC1Q155Q3 683 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 SPRYD7Q5W111 196 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 APOBEC3HQ6NTF7 200 aaKnown RBP9.21□□□□□ -0.94
ZEB1-223ENST00000561304 ADGRD1Q6QNK2 874 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 TBC1D22AQ8WUA7 517 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 TEKT1Q969V4 418 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 WNK4Q96J92 1243 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 R3HDMLQ9H3Y0 253 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 CEP126Q9P2H0 1117 aa9.21□□□□□ -0.94
ZEB1-223ENST00000561304 MKI67P46013 3256 aaKnown RBP9.21□□□□□ -0.94
ZEB1-223ENST00000561304 PPP1R3GB7ZBB8 358 aa9.2□□□□□ -0.94
ZEB1-223ENST00000561304 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
ZEB1-223ENST00000561304 GNAI3P08754 354 aa9.2□□□□□ -0.94
ZEB1-223ENST00000561304 TIMM10P62072 90 aa9.2□□□□□ -0.94
ZEB1-223ENST00000561304 HDLBPQ00341 1268 aaKnown RBP9.2□□□□□ -0.94
ZEB1-223ENST00000561304 TFCP2Q12800 502 aa9.2□□□□□ -0.94
ZEB1-223ENST00000561304 ZDHHC15Q96MV8 337 aa9.2□□□□□ -0.94
ZEB1-223ENST00000561304 C1orf115Q9H7X2 142 aa9.2□□□□□ -0.94
ZEB1-223ENST00000561304 A0A1B0GUL7 405 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 IPO8O15397 1037 aaKnown RBP9.19□□□□□ -0.94
ZEB1-223ENST00000561304 GNAI2P04899 355 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 TM4SF4P48230 202 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 DGKZQ13574 1117 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 TNFAIP1Q13829 316 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 RASGRF1Q13972 1273 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 SUPT20HL1Q3ZLR7 823 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 ZKSCAN2Q63HK3 967 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 CCDC102BQ68D86 513 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 DAGLAQ9Y4D2 1042 aa9.19□□□□□ -0.94
ZEB1-223ENST00000561304 RFX7Q2KHR2 1363 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 RPAP1Q9BWH6 1393 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-223ENST00000561304 MAST3O60307 1309 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 SALL1Q9NSC2 1324 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 MGAMO43451 1857 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 GRXCR2A6NFK2 248 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 IGF2BP3O00425 579 aaKnown RBP eCLIP9.18□□□□□ -0.94
ZEB1-223ENST00000561304 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-223ENST00000561304 IREB2P48200 963 aaKnown RBP9.18□□□□□ -0.94
ZEB1-223ENST00000561304 NFIAQ12857 509 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 C6orf132Q5T0Z8 1188 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 HHIPL2Q6UWX4 724 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 PI16Q6UXB8 463 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-223ENST00000561304 WDR66Q8TBY9 1149 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 SLC10A4Q96EP9 437 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 XAGE2Q96GT9 111 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 ELP3Q9H9T3 547 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 SUGT1Q9Y2Z0 365 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 RBBP6Q7Z6E9 1792 aaKnown RBP9.18□□□□□ -0.94
ZEB1-223ENST00000561304 MYH1P12882 1939 aa9.18□□□□□ -0.94
ZEB1-223ENST00000561304 CCDC85CA6NKD9 419 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 TNNI2P48788 182 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 SREBF2Q12772 1141 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 VGLL4Q14135 290 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 CDC42EP5Q6NZY7 148 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 ANKRD13AQ8IZ07 590 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms