RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 DEFB129Q9H1M3 183 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 BICC1Q9H694 974 aaKnown RBP9.14□□□□□ -0.95
GABPB1-211ENST00000561010 VEZTQ9HBM0 779 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 DOCK2Q92608 1830 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 DOCK3Q8IZD9 2030 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 CDK5RAP2Q96SN8 1893 aa9.13□□□□□ -0.95
GABPB1-211ENST00000561010 ALDH1L1O75891 902 aa9.13□□□□□ -0.95
GABPB1-211ENST00000561010 ZEB1P37275 1124 aaPredicted RBP9.13□□□□□ -0.95
GABPB1-211ENST00000561010 NBPF12Q5TAG4 269 aaPredicted RBP9.13□□□□□ -0.95
GABPB1-211ENST00000561010 C15orf52Q6ZUT6 534 aaKnown RBP9.13□□□□□ -0.95
GABPB1-211ENST00000561010 ARMC9Q7Z3E5 817 aa9.13□□□□□ -0.95
GABPB1-211ENST00000561010 ANKRD44Q8N8A2 993 aa9.13□□□□□ -0.95
GABPB1-211ENST00000561010 ZNF296Q8WUU4 475 aaPredicted RBP9.13□□□□□ -0.95
GABPB1-211ENST00000561010 CENPFP49454 3210 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 ATAD5Q96QE3 1844 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 HTTP42858 3142 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 RBBP6Q7Z6E9 1792 aaKnown RBP9.12□□□□□ -0.95
GABPB1-211ENST00000561010 SMAPO00193 183 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 GJA5P36382 358 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 RGS19P49795 217 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 CHAF1AQ13111 956 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-211ENST00000561010 MFSD14BQ5SR56 506 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 LDLRAD1Q5T700 205 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 SPRYD7Q5W111 196 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 CTU1Q7Z7A3 348 aaKnown RBP9.12□□□□□ -0.95
GABPB1-211ENST00000561010 SSH1Q8WYL5 1049 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 FAM84BQ96KN1 310 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-211ENST00000561010 TDRD3Q9H7E2 651 aaKnown RBP9.12□□□□□ -0.95
GABPB1-211ENST00000561010 TTF2Q9UNY4 1162 aaKnown RBP9.12□□□□□ -0.95
GABPB1-211ENST00000561010 RIPOR2Q9Y4F9 1068 aa9.12□□□□□ -0.95
GABPB1-211ENST00000561010 COL1A1P02452 1464 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-211ENST00000561010 TCP10L2B9ZVM9 353 aa9.11□□□□□ -0.95
GABPB1-211ENST00000561010 RGS20O76081 388 aa9.11□□□□□ -0.95
GABPB1-211ENST00000561010 HIBADHP31937 336 aaKnown RBP9.11□□□□□ -0.95
GABPB1-211ENST00000561010 TM4SF4P48230 202 aa9.11□□□□□ -0.95
GABPB1-211ENST00000561010 CACNB3P54284 484 aa9.11□□□□□ -0.95
GABPB1-211ENST00000561010 MTMR14Q8NCE2 650 aa9.11□□□□□ -0.95
GABPB1-211ENST00000561010 TDRD7Q8NHU6 1098 aaKnown RBP9.11□□□□□ -0.95
GABPB1-211ENST00000561010 WNK4Q96J92 1243 aa9.11□□□□□ -0.95
GABPB1-211ENST00000561010 PHOX2BQ99453 314 aa9.11□□□□□ -0.95
GABPB1-211ENST00000561010 ZNF70Q9UC06 446 aaPredicted RBP9.11□□□□□ -0.95
GABPB1-211ENST00000561010 SEPT9Q9UHD8 586 aaPredicted RBP9.11□□□□□ -0.95
GABPB1-211ENST00000561010 PHIPQ8WWQ0 1821 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 UTYO14607 1347 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 FAM205AQ6ZU69 1335 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 RCCD1A6NED2 376 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 C3orf80F5H4A9 247 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 GPR25O00155 361 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 IGF2BP3O00425 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
GABPB1-211ENST00000561010 USP2O75604 605 aaPredicted RBP9.1□□□□□ -0.95
GABPB1-211ENST00000561010 DNAJB2P25686 324 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 CLCN1P35523 988 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 MDM2Q00987 491 aaPredicted RBP9.1□□□□□ -0.95
GABPB1-211ENST00000561010 UBE4AQ14139 1066 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 RASA3Q14644 834 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 METTL24Q5JXM2 366 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 SLC10A4Q96EP9 437 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 IRX2Q9BZI1 471 aaPredicted RBP9.1□□□□□ -0.95
GABPB1-211ENST00000561010 HPS5Q9UPZ3 1129 aa9.1□□□□□ -0.95
GABPB1-211ENST00000561010 CEP290O15078 2479 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 LCE2BO14633 110 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 MYO1BO43795 1136 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 CRKP46108 304 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 BCAMP50895 628 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 FKBP1AP62942 108 aaKnown RBP9.09□□□□□ -0.95
GABPB1-211ENST00000561010 CAP1Q01518 475 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 SLFN5Q08AF3 891 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 RABL6Q3YEC7 729 aaPredicted RBP9.09□□□□□ -0.95
GABPB1-211ENST00000561010 DZIP1LQ8IYY4 767 aaKnown RBP9.09□□□□□ -0.95
GABPB1-211ENST00000561010 VGLL2Q8N8G2 317 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 WNT2BQ93097 391 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 TMEM39BQ9GZU3 492 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 USP44Q9H0E7 712 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 ELP3Q9H9T3 547 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 GPCPD1Q9NPB8 672 aa9.09□□□□□ -0.95
GABPB1-211ENST00000561010 MROH5Q6ZUA9 1318 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 SREBF2Q12772 1141 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 FBXO33Q7Z6M2 555 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 LAPTM4BQ86VI4 370 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 VPS37DQ86XT2 251 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 PARP9Q8IXQ6 854 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 NLRP7Q8WX94 980 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 TEPSINQ96N21 525 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 SIL1Q9H173 461 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 DOCK1Q14185 1865 aa9.08□□□□□ -0.96
GABPB1-211ENST00000561010 E9PSI1 815 aa9.07□□□□□ -0.96
GABPB1-211ENST00000561010 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
GABPB1-211ENST00000561010 FKTNO75072 461 aa9.07□□□□□ -0.96
GABPB1-211ENST00000561010 FRAT2O75474 233 aaPredicted RBP9.07□□□□□ -0.96
GABPB1-211ENST00000561010 RFX5P48382 616 aaPredicted RBP9.07□□□□□ -0.96
GABPB1-211ENST00000561010 MMP14P50281 582 aa9.07□□□□□ -0.96
GABPB1-211ENST00000561010 MAP3K11Q16584 847 aa9.07□□□□□ -0.96
GABPB1-211ENST00000561010 PTPN18Q99952 460 aa9.07□□□□□ -0.96
GABPB1-211ENST00000561010 KDM4CQ9H3R0 1056 aa9.07□□□□□ -0.96
GABPB1-211ENST00000561010 SMC4Q9NTJ3 1288 aa9.07□□□□□ -0.96
GABPB1-211ENST00000561010 PPP2R3BQ9Y5P8 575 aa9.07□□□□□ -0.96
GABPB1-211ENST00000561010 PTPRCP08575 1304 aa9.06□□□□□ -0.96
GABPB1-211ENST00000561010 MKI67P46013 3256 aaKnown RBP9.06□□□□□ -0.96
GABPB1-211ENST00000561010 MANSC4A6NHS7 340 aaPredicted RBP9.06□□□□□ -0.96
GABPB1-211ENST00000561010 PDE8BO95263 885 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms