RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 DZIP1Q86YF9 867 aaKnown RBP16.77■□□□□ 0.28
VPS18-203ENST00000558855 ERO1AQ96HE7 468 aa16.77■□□□□ 0.28
VPS18-203ENST00000558855 IDI2Q9BXS1 227 aa16.77■□□□□ 0.28
VPS18-203ENST00000558855 LOC285556D6RIA3 1793 aa16.77■□□□□ 0.27
VPS18-203ENST00000558855 FAM196BA6NMK8 535 aa16.76■□□□□ 0.27
VPS18-203ENST00000558855 PICALMQ13492 652 aa16.76■□□□□ 0.27
VPS18-203ENST00000558855 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
VPS18-203ENST00000558855 NOL9Q5SY16 702 aaKnown RBP16.76■□□□□ 0.27
VPS18-203ENST00000558855 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
VPS18-203ENST00000558855 SPATA5Q8NB90 893 aa16.76■□□□□ 0.27
VPS18-203ENST00000558855 SSH3Q8TE77 659 aa16.76■□□□□ 0.27
VPS18-203ENST00000558855 FAM163AQ96GL9 167 aaPredicted RBP16.76■□□□□ 0.27
VPS18-203ENST00000558855 DBNDD2Q9BQY9 259 aa16.76■□□□□ 0.27
VPS18-203ENST00000558855 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
VPS18-203ENST00000558855 AKAP2Q9Y2D5 859 aa16.76■□□□□ 0.27
VPS18-203ENST00000558855 CETPP11597 493 aa16.75■□□□□ 0.27
VPS18-203ENST00000558855 PPATQ06203 517 aa16.75■□□□□ 0.27
VPS18-203ENST00000558855 SNAPC2Q13487 334 aa16.75■□□□□ 0.27
VPS18-203ENST00000558855 NSUN4Q96CB9 384 aaKnown RBP16.75■□□□□ 0.27
VPS18-203ENST00000558855 EFCC1Q9HA90 598 aa16.75■□□□□ 0.27
VPS18-203ENST00000558855 ZFYVE28Q9HCC9 887 aa16.75■□□□□ 0.27
VPS18-203ENST00000558855 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
VPS18-203ENST00000558855 KCNH4Q9UQ05 1017 aa16.75■□□□□ 0.27
VPS18-203ENST00000558855 PTCH2Q9Y6C5 1203 aa16.75■□□□□ 0.27
VPS18-203ENST00000558855 GPR75-ASB3A0A0A6YYF3 556 aa16.74■□□□□ 0.27
VPS18-203ENST00000558855 ENTPD3O75355 529 aa16.74■□□□□ 0.27
VPS18-203ENST00000558855 ATP8B2P98198 1209 aa16.74■□□□□ 0.27
VPS18-203ENST00000558855 TNNI3KQ59H18 835 aa16.74■□□□□ 0.27
VPS18-203ENST00000558855 GPAT2Q6NUI2 795 aa16.74■□□□□ 0.27
VPS18-203ENST00000558855 FPGT-TNNI3KV9GXZ4 949 aa16.74■□□□□ 0.27
VPS18-203ENST00000558855 ZBTB7BO15156 539 aaPredicted RBP16.73■□□□□ 0.27
VPS18-203ENST00000558855 TLR2O60603 784 aa16.73■□□□□ 0.27
VPS18-203ENST00000558855 MAP3K10Q02779 954 aa16.73■□□□□ 0.27
VPS18-203ENST00000558855 G3BP1Q13283 466 aaKnown RBP eCLIP16.73■□□□□ 0.27
VPS18-203ENST00000558855 RRP1BQ14684 758 aaKnown RBP16.73■□□□□ 0.27
VPS18-203ENST00000558855 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
VPS18-203ENST00000558855 ADGRA1Q86SQ6 560 aa16.73■□□□□ 0.27
VPS18-203ENST00000558855 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
VPS18-203ENST00000558855 HOOK2Q96ED9 719 aa16.73■□□□□ 0.27
VPS18-203ENST00000558855 CPA4Q9UI42 421 aa16.73■□□□□ 0.27
VPS18-203ENST00000558855 KIAA0100Q14667 2235 aaKnown RBP16.73■□□□□ 0.27
VPS18-203ENST00000558855 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
VPS18-203ENST00000558855 MYH1P12882 1939 aa16.72■□□□□ 0.27
VPS18-203ENST00000558855 C17orf99Q6UX52 265 aa16.72■□□□□ 0.27
VPS18-203ENST00000558855 ITPRIPQ8IWB1 547 aa16.72■□□□□ 0.27
VPS18-203ENST00000558855 PANK1Q8TE04 598 aa16.72■□□□□ 0.27
VPS18-203ENST00000558855 ARMC5Q96C12 935 aa16.72■□□□□ 0.27
VPS18-203ENST00000558855 DDX60LQ5H9U9 1706 aaKnown RBP16.71■□□□□ 0.27
VPS18-203ENST00000558855 PDHXO00330 501 aa16.71■□□□□ 0.27
VPS18-203ENST00000558855 PTPRAP18433 802 aa16.71■□□□□ 0.27
VPS18-203ENST00000558855 LACTBP83111 547 aaPredicted RBP16.71■□□□□ 0.27
VPS18-203ENST00000558855 ANKRD23Q86SG2 305 aa16.71■□□□□ 0.27
VPS18-203ENST00000558855 ZSCAN29Q8IWY8 852 aaPredicted RBP16.71■□□□□ 0.27
VPS18-203ENST00000558855 SCYL3Q8IZE3 742 aa16.71■□□□□ 0.27
VPS18-203ENST00000558855 DBNLQ9UJU6 430 aaKnown RBP16.71■□□□□ 0.27
VPS18-203ENST00000558855 NDUFB9Q9Y6M9 179 aa16.71■□□□□ 0.27
VPS18-203ENST00000558855 DOCK3Q8IZD9 2030 aa16.7■□□□□ 0.26
VPS18-203ENST00000558855 COL2A1P02458 1487 aaPredicted RBP16.7■□□□□ 0.26
VPS18-203ENST00000558855 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
VPS18-203ENST00000558855 CYP2E1P05181 493 aaPredicted RBP16.7■□□□□ 0.26
VPS18-203ENST00000558855 CYP2C8P10632 490 aa16.7■□□□□ 0.26
VPS18-203ENST00000558855 SHROOM1Q2M3G4 852 aaPredicted RBP16.7■□□□□ 0.26
VPS18-203ENST00000558855 GORABQ5T7V8 394 aa16.7■□□□□ 0.26
VPS18-203ENST00000558855 SPTY2D1Q68D10 685 aaPredicted RBP16.7■□□□□ 0.26
VPS18-203ENST00000558855 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
VPS18-203ENST00000558855 ZCCHC17Q9NP64 241 aaKnown RBP16.7■□□□□ 0.26
VPS18-203ENST00000558855 PIH1D3Q9NQM4 214 aaKnown RBP16.7■□□□□ 0.26
VPS18-203ENST00000558855 RAI14Q9P0K7 980 aa16.7■□□□□ 0.26
VPS18-203ENST00000558855 NOP58Q9Y2X3 529 aaKnown RBP16.7■□□□□ 0.26
VPS18-203ENST00000558855 EN2P19622 333 aaPredicted RBP16.69■□□□□ 0.26
VPS18-203ENST00000558855 ZAP70P43403 619 aa16.69■□□□□ 0.26
VPS18-203ENST00000558855 JAG1P78504 1218 aa16.69■□□□□ 0.26
VPS18-203ENST00000558855 CEP85Q6P2H3 762 aa16.69■□□□□ 0.26
VPS18-203ENST00000558855 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
VPS18-203ENST00000558855 EAF2Q96CJ1 260 aaPredicted RBP16.69■□□□□ 0.26
VPS18-203ENST00000558855 ZNF333Q96JL9 665 aa16.69■□□□□ 0.26
VPS18-203ENST00000558855 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
VPS18-203ENST00000558855 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
VPS18-203ENST00000558855 GPR108Q9NPR9 543 aa16.69■□□□□ 0.26
VPS18-203ENST00000558855 AFG3L2Q9Y4W6 797 aa16.69■□□□□ 0.26
VPS18-203ENST00000558855 ZHX2Q9Y6X8 837 aa16.69■□□□□ 0.26
VPS18-203ENST00000558855 A0A0G2JLL6 359 aaPredicted RBP16.68■□□□□ 0.26
VPS18-203ENST00000558855 MYCP01106 439 aaPredicted RBP16.68■□□□□ 0.26
VPS18-203ENST00000558855 PRRT2Q7Z6L0 340 aaPredicted RBP16.68■□□□□ 0.26
VPS18-203ENST00000558855 FTSJ3Q8IY81 847 aaKnown RBP16.68■□□□□ 0.26
VPS18-203ENST00000558855 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
VPS18-203ENST00000558855 PLXNB2O15031 1838 aa16.68■□□□□ 0.26
VPS18-203ENST00000558855 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
VPS18-203ENST00000558855 BCRP11274 1271 aa16.67■□□□□ 0.26
VPS18-203ENST00000558855 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
VPS18-203ENST00000558855 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
VPS18-203ENST00000558855 SLF2Q8IX21 1173 aa16.67■□□□□ 0.26
VPS18-203ENST00000558855 DNAJC18Q9H819 358 aa16.67■□□□□ 0.26
VPS18-203ENST00000558855 EXOC6BQ9Y2D4 811 aa16.67■□□□□ 0.26
VPS18-203ENST00000558855 NAV1Q8NEY1 1877 aa16.67■□□□□ 0.26
VPS18-203ENST00000558855 SLC34A2O95436 690 aa16.66■□□□□ 0.26
VPS18-203ENST00000558855 DYNLL1P63167 89 aaKnown RBP16.66■□□□□ 0.26
VPS18-203ENST00000558855 GADL1Q6ZQY3 521 aa16.66■□□□□ 0.26
VPS18-203ENST00000558855 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
VPS18-203ENST00000558855 AATFQ9NY61 560 aaKnown RBP eCLIP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms