RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 G3BP1Q13283 466 aaKnown RBP eCLIP14.24□□□□□ -0.13
CASC4-205ENST00000558735 PPIL2Q13356 520 aa14.24□□□□□ -0.13
CASC4-205ENST00000558735 SNAPC2Q13487 334 aa14.24□□□□□ -0.13
CASC4-205ENST00000558735 MVPQ14764 893 aaKnown RBP14.24□□□□□ -0.13
CASC4-205ENST00000558735 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
CASC4-205ENST00000558735 NKX2-3Q8TAU0 364 aa14.24□□□□□ -0.13
CASC4-205ENST00000558735 ZNF384Q8TF68 577 aa14.24□□□□□ -0.13
CASC4-205ENST00000558735 IDI2Q9BXS1 227 aa14.24□□□□□ -0.13
CASC4-205ENST00000558735 HMG20BQ9P0W2 317 aa14.24□□□□□ -0.13
CASC4-205ENST00000558735 RGS3P49796 1198 aa14.23□□□□□ -0.13
CASC4-205ENST00000558735 ATP8B2P98198 1209 aa14.23□□□□□ -0.13
CASC4-205ENST00000558735 MAP3K10Q02779 954 aa14.23□□□□□ -0.13
CASC4-205ENST00000558735 MECOMQ03112 1051 aa14.23□□□□□ -0.13
CASC4-205ENST00000558735 PPATQ06203 517 aa14.23□□□□□ -0.13
CASC4-205ENST00000558735 POLA2Q14181 598 aa14.23□□□□□ -0.13
CASC4-205ENST00000558735 SPTY2D1Q68D10 685 aaPredicted RBP14.23□□□□□ -0.13
CASC4-205ENST00000558735 TBC1D9Q6ZT07 1266 aa14.23□□□□□ -0.13
CASC4-205ENST00000558735 SH3BP5LQ7L8J4 393 aa14.23□□□□□ -0.13
CASC4-205ENST00000558735 RBM27Q9P2N5 1060 aaKnown RBP14.23□□□□□ -0.13
CASC4-205ENST00000558735 SRRDQ9UH36 339 aa14.23□□□□□ -0.13
CASC4-205ENST00000558735 ADGRA2Q96PE1 1338 aa14.22□□□□□ -0.13
CASC4-205ENST00000558735 PHF20L1A8MW92 1017 aa14.22□□□□□ -0.13
CASC4-205ENST00000558735 ZBTB7BO15156 539 aaPredicted RBP14.22□□□□□ -0.13
CASC4-205ENST00000558735 ENTPD3O75355 529 aa14.22□□□□□ -0.13
CASC4-205ENST00000558735 GJB1P08034 283 aa14.22□□□□□ -0.13
CASC4-205ENST00000558735 SLURP2P0DP57 97 aa14.22□□□□□ -0.13
CASC4-205ENST00000558735 GJA8P48165 433 aa14.22□□□□□ -0.13
CASC4-205ENST00000558735 PI16Q6UXB8 463 aa14.22□□□□□ -0.13
CASC4-205ENST00000558735 ERICH6Q7L0X2 663 aa14.22□□□□□ -0.13
CASC4-205ENST00000558735 DZIP1Q86YF9 867 aaKnown RBP14.22□□□□□ -0.13
CASC4-205ENST00000558735 SLF2Q8IX21 1173 aa14.22□□□□□ -0.13
CASC4-205ENST00000558735 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.22□□□□□ -0.13
CASC4-205ENST00000558735 DDX4Q9NQI0 724 aaKnown RBP14.22□□□□□ -0.13
CASC4-205ENST00000558735 GPR75-ASB3A0A0A6YYF3 556 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 DDTLA6NHG4 134 aaPredicted RBP14.21□□□□□ -0.13
CASC4-205ENST00000558735 RLBP1P12271 317 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 CAPN2P17655 700 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 CTGFP29279 349 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 ARID4AP29374 1257 aaPredicted RBP14.21□□□□□ -0.13
CASC4-205ENST00000558735 RHBDL3P58872 404 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 MOGSQ13724 837 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 MTFR1Q15390 333 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 NOL9Q5SY16 702 aaKnown RBP14.21□□□□□ -0.13
CASC4-205ENST00000558735 GORABQ5T7V8 394 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 ANKRD23Q86SG2 305 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 SPATA5Q8NB90 893 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 SSH3Q8TE77 659 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 TRIM47Q96LD4 638 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 KCNH4Q9UQ05 1017 aa14.21□□□□□ -0.13
CASC4-205ENST00000558735 LAMA3Q16787 3333 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 A0A1W2PPC1 479 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 MYCP01106 439 aaPredicted RBP14.2□□□□□ -0.14
CASC4-205ENST00000558735 HOXD10P28358 340 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 GRK4P32298 578 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 MCAMP43121 646 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 BTDP43251 543 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 DPF3Q92784 378 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 NSUN4Q96CB9 384 aaKnown RBP14.2□□□□□ -0.14
CASC4-205ENST00000558735 HTATIP2Q9BUP3 242 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 GPR108Q9NPR9 543 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 ATRNL1Q5VV63 1379 aa14.2□□□□□ -0.14
CASC4-205ENST00000558735 MYH13Q9UKX3 1938 aa14.19□□□□□ -0.14
CASC4-205ENST00000558735 MROH7-TTC4A0A0A0MT08 1334 aa14.19□□□□□ -0.14
CASC4-205ENST00000558735 OSBPP22059 807 aa14.19□□□□□ -0.14
CASC4-205ENST00000558735 PSMC4P43686 418 aa14.19□□□□□ -0.14
CASC4-205ENST00000558735 ZSCAN29Q8IWY8 852 aaPredicted RBP14.19□□□□□ -0.14
CASC4-205ENST00000558735 C1orf115Q9H7X2 142 aa14.19□□□□□ -0.14
CASC4-205ENST00000558735 NR2E3Q9Y5X4 410 aa14.19□□□□□ -0.14
CASC4-205ENST00000558735 ZSWIM8A7E2V4 1837 aa14.19□□□□□ -0.14
CASC4-205ENST00000558735 PDHXO00330 501 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
CASC4-205ENST00000558735 LDHCP07864 332 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 UQCRFS1P1P0C7P4 283 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 CCL5P13501 91 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 PICALMQ13492 652 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 TNNI3KQ59H18 835 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 GPAT2Q6NUI2 795 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 SNRKQ9NRH2 765 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
CASC4-205ENST00000558735 ZHX2Q9Y6X8 837 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 FPGT-TNNI3KV9GXZ4 949 aa14.18□□□□□ -0.14
CASC4-205ENST00000558735 AK9Q5TCS8 1911 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 MYH2Q9UKX2 1941 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 CXCL11O14625 94 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
CASC4-205ENST00000558735 PTPRAP18433 802 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 GSTO1P78417 241 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 ITPRIPQ8IWB1 547 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 SCYL3Q8IZE3 742 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 RAET1EQ8TD07 263 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 DBNDD2Q9BQY9 259 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 RAI14Q9P0K7 980 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 CPA4Q9UI42 421 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 RFX7Q2KHR2 1363 aa14.17□□□□□ -0.14
CASC4-205ENST00000558735 TBC1D12O60347 775 aa14.16□□□□□ -0.14
CASC4-205ENST00000558735 CTNND1O60716 968 aaKnown RBP14.16□□□□□ -0.14
CASC4-205ENST00000558735 BCRP11274 1271 aa14.16□□□□□ -0.14
CASC4-205ENST00000558735 OS9Q13438 667 aaPredicted RBP14.16□□□□□ -0.14
CASC4-205ENST00000558735 CCDC158Q5M9N0 1113 aa14.16□□□□□ -0.14
CASC4-205ENST00000558735 FTSJ3Q8IY81 847 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms