RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ROCK2O75116 1388 aaKnown RBP5.99□□□□□ -1.45
SPG11-211ENST00000558561 TONSLQ96HA7 1378 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 TRPA1O75762 1119 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 ALBP02768 609 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 NEFLP07196 543 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 ACPPP15309 386 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 HOXB4P17483 251 aaPredicted RBP5.99□□□□□ -1.45
SPG11-211ENST00000558561 EIF2AK2P19525 551 aaKnown RBP5.99□□□□□ -1.45
SPG11-211ENST00000558561 MFAP1P55081 439 aaKnown RBP5.99□□□□□ -1.45
SPG11-211ENST00000558561 ZC3H6P61129 1189 aaKnown RBP5.99□□□□□ -1.45
SPG11-211ENST00000558561 CHRNA2Q15822 529 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 C20orf204Q6ZNR8 217 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 MICALL1Q8N3F8 863 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 CEP120Q8N960 986 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 PMEPA1Q969W9 287 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 TESK2Q96S53 571 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 CSRNP1Q96S65 589 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 RRAGCQ9HB90 399 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 ENAMQ9NRM1 1142 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 LATS2Q9NRM7 1088 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 ADAMTS8Q9UP79 889 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 M0R082 166 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 CPNE3O75131 537 aaKnown RBP5.98□□□□□ -1.45
SPG11-211ENST00000558561 KIF4AO95239 1232 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 GHRHP01286 108 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 P4HBP07237 508 aaKnown RBP5.98□□□□□ -1.45
SPG11-211ENST00000558561 MAPK8P45983 427 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 SNRPNP63162 240 aaKnown RBP5.98□□□□□ -1.45
SPG11-211ENST00000558561 ATP11AP98196 1134 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 ELMSAN1Q6PJG2 1045 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 ZNF417Q8TAU3 575 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 PLD4Q96BZ4 506 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 ZNF587Q96SQ5 575 aaPredicted RBP5.98□□□□□ -1.45
SPG11-211ENST00000558561 SETDB2Q96T68 719 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 LPIN3Q9BQK8 851 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 SMG9Q9H0W8 520 aaKnown RBP5.98□□□□□ -1.45
SPG11-211ENST00000558561 USP21Q9UK80 565 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 WWC3Q9ULE0 1092 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 TULP4Q9NRJ4 1543 aa5.98□□□□□ -1.45
SPG11-211ENST00000558561 ATP7BP35670 1465 aa5.97□□□□□ -1.45
SPG11-211ENST00000558561 BCL9LQ86UU0 1499 aa5.97□□□□□ -1.45
SPG11-211ENST00000558561 TRPM3Q9HCF6 1732 aaPredicted RBP5.97□□□□□ -1.45
SPG11-211ENST00000558561 RGS9O75916 674 aaPredicted RBP5.97□□□□□ -1.45
SPG11-211ENST00000558561 FMR1Q06787 632 aaKnown RBP eCLIP5.97□□□□□ -1.45
SPG11-211ENST00000558561 PEAR1Q5VY43 1037 aaPredicted RBP5.97□□□□□ -1.45
SPG11-211ENST00000558561 NPAS4Q8IUM7 802 aa5.97□□□□□ -1.45
SPG11-211ENST00000558561 CCDC74AQ96AQ1 378 aa5.97□□□□□ -1.45
SPG11-211ENST00000558561 SPACA7Q96KW9 195 aa5.97□□□□□ -1.45
SPG11-211ENST00000558561 DNAJC25Q9H1X3 360 aa5.97□□□□□ -1.45
SPG11-211ENST00000558561 RASSF4Q9H2L5 321 aa5.97□□□□□ -1.45
SPG11-211ENST00000558561 JPH1Q9HDC5 661 aaPredicted RBP5.97□□□□□ -1.45
SPG11-211ENST00000558561 QRICH2Q9H0J4 1663 aa5.97□□□□□ -1.45
SPG11-211ENST00000558561 GPRASP1Q5JY77 1395 aa5.96□□□□□ -1.45
SPG11-211ENST00000558561 PNMA6FA0A0J9YX94 578 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 EDN3P14138 238 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 RXRBP28702 533 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 IRS1P35568 1242 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 ENOX2Q16206 610 aaKnown RBP5.96□□□□□ -1.46
SPG11-211ENST00000558561 KANK3Q6NY19 840 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.96□□□□□ -1.46
SPG11-211ENST00000558561 GALNT12Q8IXK2 581 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 EPS8L3Q8TE67 593 aaKnown RBP5.96□□□□□ -1.46
SPG11-211ENST00000558561 HHIPQ96QV1 700 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 OSMRQ99650 979 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 PBX4Q9BYU1 374 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 DZANK1Q9NVP4 752 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 STK17AQ9UEE5 414 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 PPIP5K1Q6PFW1 1433 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 ADGRB2O60241 1585 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 CNTNAP5Q8WYK1 1306 aa5.96□□□□□ -1.46
SPG11-211ENST00000558561 SBNO1A3KN83 1393 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 A0A1W2PP55 124 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 NFKBIEO00221 500 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 DGKGP49619 791 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 AFF1P51825 1210 aaKnown RBP5.95□□□□□ -1.46
SPG11-211ENST00000558561 TAGLNQ01995 201 aaKnown RBP5.95□□□□□ -1.46
SPG11-211ENST00000558561 COL9A3Q14050 684 aaPredicted RBP5.95□□□□□ -1.46
SPG11-211ENST00000558561 GRIK5Q16478 980 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 CEP135Q66GS9 1140 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 ZNF772Q68DY9 489 aaPredicted RBP5.95□□□□□ -1.46
SPG11-211ENST00000558561 PI16Q6UXB8 463 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 ADAMTSL4Q6UY14 1074 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 LINC00114Q6XXX2 140 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 ANKARQ7Z5J8 1434 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 NME9Q86XW9 330 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 POP1Q99575 1024 aaKnown RBP5.95□□□□□ -1.46
SPG11-211ENST00000558561 ZKSCAN3Q9BRR0 538 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 RBSNQ9H1K0 784 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 NPHS2Q9NP85 383 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 BTG4Q9NY30 223 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 PODXL2Q9NZ53 605 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 FRRS1LQ9P0K9 344 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 TRIM33Q9UPN9 1127 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 COL22A1Q8NFW1 1626 aaPredicted RBP5.95□□□□□ -1.46
SPG11-211ENST00000558561 TTC21BQ7Z4L5 1316 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 EVC2Q86UK5 1308 aa5.95□□□□□ -1.46
SPG11-211ENST00000558561 ALS2Q96Q42 1657 aa5.94□□□□□ -1.46
SPG11-211ENST00000558561 POLR3AO14802 1390 aaPredicted RBP5.94□□□□□ -1.46
SPG11-211ENST00000558561 TNS3Q68CZ2 1445 aa5.94□□□□□ -1.46
SPG11-211ENST00000558561 SSH2Q76I76 1423 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms