RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 WRNIP1Q96S55 665 aa12.49□□□□□ -0.41
TPM1-212ENST00000558347 CFHR5Q9BXR6 569 aa12.49□□□□□ -0.41
TPM1-212ENST00000558347 SNCAIPQ9Y6H5 919 aa12.49□□□□□ -0.41
TPM1-212ENST00000558347 MROH7-TTC4A0A0A0MT08 1334 aa12.49□□□□□ -0.41
TPM1-212ENST00000558347 GPR25O00155 361 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 WDHD1O75717 1129 aaPredicted RBP12.48□□□□□ -0.41
TPM1-212ENST00000558347 UQCRFS1P1P0C7P4 283 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 TTC39AQ5SRH9 613 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 NSUN4Q96CB9 384 aaKnown RBP12.48□□□□□ -0.41
TPM1-212ENST00000558347 EAF2Q96CJ1 260 aaPredicted RBP12.48□□□□□ -0.41
TPM1-212ENST00000558347 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 PTPN18Q99952 460 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 IDI2Q9BXS1 227 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 CCDC8Q9H0W5 538 aaPredicted RBP12.48□□□□□ -0.41
TPM1-212ENST00000558347 SNRKQ9NRH2 765 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 TLR7Q9NYK1 1049 aaKnown RBP12.48□□□□□ -0.41
TPM1-212ENST00000558347 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
TPM1-212ENST00000558347 EXOC6BQ9Y2D4 811 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 CSADQ9Y600 493 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 DOCK2Q92608 1830 aa12.48□□□□□ -0.41
TPM1-212ENST00000558347 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
TPM1-212ENST00000558347 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 HSP90AB4PQ58FF6 505 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 CCDC158Q5M9N0 1113 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 SH3BP5LQ7L8J4 393 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 DDX4Q9NQI0 724 aaKnown RBP12.47□□□□□ -0.41
TPM1-212ENST00000558347 RAI14Q9P0K7 980 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 ATRNL1Q5VV63 1379 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 MYO5AQ9Y4I1 1855 aaKnown RBP12.47□□□□□ -0.41
TPM1-212ENST00000558347 MAST2Q6P0Q8 1798 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 RAB11FIP3O75154 756 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 CYP2E1P05181 493 aaPredicted RBP12.47□□□□□ -0.41
TPM1-212ENST00000558347 INPP5BP32019 993 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 RHBDL3P58872 404 aa12.47□□□□□ -0.41
TPM1-212ENST00000558347 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
TPM1-212ENST00000558347 CTU1Q7Z7A3 348 aaKnown RBP12.47□□□□□ -0.41
TPM1-212ENST00000558347 DDTLA6NHG4 134 aaPredicted RBP12.46□□□□□ -0.42
TPM1-212ENST00000558347 SPDYE5A6NIY4 337 aa12.46□□□□□ -0.42
TPM1-212ENST00000558347 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.42
TPM1-212ENST00000558347 ENTPD3O75355 529 aa12.46□□□□□ -0.42
TPM1-212ENST00000558347 SEC24BO95487 1268 aa12.46□□□□□ -0.42
TPM1-212ENST00000558347 SLURP2P0DP57 97 aa12.46□□□□□ -0.42
TPM1-212ENST00000558347 PICALMQ13492 652 aa12.46□□□□□ -0.42
TPM1-212ENST00000558347 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.42
TPM1-212ENST00000558347 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.42
TPM1-212ENST00000558347 ZNF112Q9UJU3 913 aa12.46□□□□□ -0.42
TPM1-212ENST00000558347 CCL15-CCL14A0A0B4J2E2 113 aa12.45□□□□□ -0.42
TPM1-212ENST00000558347 IRF6O14896 467 aa12.45□□□□□ -0.42
TPM1-212ENST00000558347 FKTNO75072 461 aa12.45□□□□□ -0.42
TPM1-212ENST00000558347 ZAP70P43403 619 aa12.45□□□□□ -0.42
TPM1-212ENST00000558347 GSTO1P78417 241 aa12.45□□□□□ -0.42
TPM1-212ENST00000558347 GSE1Q14687 1217 aa12.45□□□□□ -0.42
TPM1-212ENST00000558347 CCL15Q16663 113 aa12.45□□□□□ -0.42
TPM1-212ENST00000558347 ERO1BQ86YB8 467 aa12.45□□□□□ -0.42
TPM1-212ENST00000558347 ZNF512BQ96KM6 892 aaPredicted RBP12.45□□□□□ -0.42
TPM1-212ENST00000558347 LRP2BPQ9P2M1 347 aa12.45□□□□□ -0.42
TPM1-212ENST00000558347 HTTP42858 3142 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 LDHCP07864 332 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 GTF2A2P52657 109 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 CRHR2Q13324 411 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 OTUD7BQ6GQQ9 843 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 ADGRA1Q86SQ6 560 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 ERC1Q8IUD2 1116 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 RHPN1Q8TCX5 695 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 LRRCC1Q9C099 1032 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 LNPKQ9C0E8 428 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
TPM1-212ENST00000558347 PHF20L1A8MW92 1017 aa12.43□□□□□ -0.42
TPM1-212ENST00000558347 PPATQ06203 517 aa12.43□□□□□ -0.42
TPM1-212ENST00000558347 PPIL2Q13356 520 aa12.43□□□□□ -0.42
TPM1-212ENST00000558347 NOL9Q5SY16 702 aaKnown RBP12.43□□□□□ -0.42
TPM1-212ENST00000558347 AACSQ86V21 672 aa12.43□□□□□ -0.42
TPM1-212ENST00000558347 ZSCAN29Q8IWY8 852 aaPredicted RBP12.43□□□□□ -0.42
TPM1-212ENST00000558347 FAM43AQ8N2R8 423 aa12.43□□□□□ -0.42
TPM1-212ENST00000558347 KIF1BPQ96EK5 621 aa12.43□□□□□ -0.42
TPM1-212ENST00000558347 PIH1D3Q9NQM4 214 aaKnown RBP12.43□□□□□ -0.42
TPM1-212ENST00000558347 CDK5RAP2Q96SN8 1893 aa12.43□□□□□ -0.42
TPM1-212ENST00000558347 APBB1O00213 710 aa12.42□□□□□ -0.42
TPM1-212ENST00000558347 MAP3K10Q02779 954 aa12.42□□□□□ -0.42
TPM1-212ENST00000558347 NAA16Q6N069 864 aaPredicted RBP12.42□□□□□ -0.42
TPM1-212ENST00000558347 SH3RF3Q8TEJ3 882 aaPredicted RBP12.42□□□□□ -0.42
TPM1-212ENST00000558347 NPM3O75607 178 aaKnown RBP12.42□□□□□ -0.42
TPM1-212ENST00000558347 MAP4K4O95819 1239 aaPredicted RBP12.42□□□□□ -0.42
TPM1-212ENST00000558347 SNAPC2Q13487 334 aa12.42□□□□□ -0.42
TPM1-212ENST00000558347 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
TPM1-212ENST00000558347 OSBPL5Q9H0X9 879 aaPredicted RBP12.42□□□□□ -0.42
TPM1-212ENST00000558347 ANTXR1Q9H6X2 564 aa12.42□□□□□ -0.42
TPM1-212ENST00000558347 AATFQ9NY61 560 aaKnown RBP eCLIP12.42□□□□□ -0.42
TPM1-212ENST00000558347 FOCADQ5VW36 1801 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 DOCK1Q14185 1865 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 COL2A1P02458 1487 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms