RNA–Protein interactions for RNA: ENST00000558176.1

HMG20A-203, Transcript of high mobility group 20A, humanhuman

TSL 3

Gene HMG20A, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-203ENST00000558176 BRIP1Q9BX63 1249 aa4.3□□□□□ -1.72
HMG20A-203ENST00000558176 PCGF6Q9BYE7 350 aa4.3□□□□□ -1.72
HMG20A-203ENST00000558176 TAOK3Q9H2K8 898 aa4.3□□□□□ -1.72
HMG20A-203ENST00000558176 CRISPLD1Q9H336 500 aa4.3□□□□□ -1.72
HMG20A-203ENST00000558176 TIMELESSQ9UNS1 1208 aa4.3□□□□□ -1.72
HMG20A-203ENST00000558176 TBC1D2BQ9UPU7 963 aa4.3□□□□□ -1.72
HMG20A-203ENST00000558176 NRXN2Q9P2S2 1712 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 HEG1Q9ULI3 1381 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 SCN7AQ01118 1682 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 A0A087WZG4 1122 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 NEURL1BA8MQ27 555 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 U2SURPO15042 1029 aaKnown RBP4.29□□□□□ -1.72
HMG20A-203ENST00000558176 FOXN1O15353 648 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 DIAPH1O60610 1272 aaKnown RBP4.29□□□□□ -1.72
HMG20A-203ENST00000558176 GATA4P43694 442 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 PIP4K2AP48426 406 aaPredicted RBP4.29□□□□□ -1.72
HMG20A-203ENST00000558176 ST5P78524 1137 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 TEFQ10587 303 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 NR1H3Q13133 447 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 EAPPQ56P03 285 aaPredicted RBP4.29□□□□□ -1.72
HMG20A-203ENST00000558176 CC2D1BQ5T0F9 858 aaKnown RBP4.29□□□□□ -1.72
HMG20A-203ENST00000558176 FIGNL1Q6PIW4 674 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 CHSY3Q70JA7 882 aa4.29□□□□□ -1.72
HMG20A-203ENST00000558176 NPM2Q86SE8 214 aaKnown RBP4.29□□□□□ -1.72
HMG20A-203ENST00000558176 COL11A2P13942 1736 aaPredicted RBP4.29□□□□□ -1.72
HMG20A-203ENST00000558176 MYH14Q7Z406 1995 aaKnown RBP4.29□□□□□ -1.72
HMG20A-203ENST00000558176 CNTNAP1P78357 1384 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 KIF7Q2M1P5 1343 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 ZNF541Q9H0D2 1346 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 LTBP3Q9NS15 1303 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 DLEC1Q9Y238 1755 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 IQCA1LA6NCM1 817 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 FAM177BA6PVY3 158 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 CAMTA2O94983 1202 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 MYCP01106 439 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-203ENST00000558176 A1BGP04217 495 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 SRGNP10124 158 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 STYK1Q6J9G0 422 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 ZNF790Q6PG37 636 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 OLFM4Q6UX06 510 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 NBPF5PQ86XG9 351 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-203ENST00000558176 RHBDD1Q8TEB9 315 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 AIDAQ96BJ3 306 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 MASTLQ96GX5 879 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 FMNL2Q96PY5 1086 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 SETDB2Q96T68 719 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 TAF1DQ9H5J8 278 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-203ENST00000558176 ZNF277Q9NRM2 450 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-203ENST00000558176 PCDHGC4Q9Y5F7 938 aa4.28□□□□□ -1.72
HMG20A-203ENST00000558176 COL3A1P02461 1466 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-203ENST00000558176 SCN11AQ9UI33 1791 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 RNF123Q5XPI4 1314 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 PASKQ96RG2 1323 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 CLSPNQ9HAW4 1339 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 PRAMEF22A3QJZ6 481 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 TMEM88BA6NKF7 163 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 GNAT3A8MTJ3 354 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 KCNQ3O43525 872 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 SPATA31C1P0DKV0 1188 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 ADH6P28332 368 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 IL6STP40189 918 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-203ENST00000558176 LBX1P52954 281 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 FKBP4Q02790 459 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMG20A-203ENST00000558176 GRM1Q13255 1194 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 RSPO4Q2I0M5 234 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-203ENST00000558176 CCDC93Q567U6 631 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 SOGA3Q5TF21 947 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 MAP1SQ66K74 1059 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-203ENST00000558176 LDHDQ86WU2 507 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 IL17REQ8NFR9 667 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 GAS2L2Q8NHY3 880 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 TRIM11Q96F44 468 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 TEX13AQ9BXU3 409 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-203ENST00000558176 ZCCHC2Q9C0B9 1178 aaKnown RBP4.27□□□□□ -1.73
HMG20A-203ENST00000558176 AVENQ9NQS1 362 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-203ENST00000558176 DNAAF2Q9NVR5 837 aaKnown RBP4.27□□□□□ -1.73
HMG20A-203ENST00000558176 ABT1Q9ULW3 272 aaKnown RBP4.27□□□□□ -1.73
HMG20A-203ENST00000558176 UBR2Q8IWV8 1755 aa4.27□□□□□ -1.73
HMG20A-203ENST00000558176 AFDNP55196 1824 aaKnown RBP4.26□□□□□ -1.73
HMG20A-203ENST00000558176 NPR1P16066 1061 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 PRKAR2BP31323 418 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 EPHX2P34913 555 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 CTCFP49711 727 aaPredicted RBP4.26□□□□□ -1.73
HMG20A-203ENST00000558176 IRF5Q13568 498 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 FOXD4L6Q3SYB3 417 aaPredicted RBP4.26□□□□□ -1.73
HMG20A-203ENST00000558176 NKAPLQ5M9Q1 402 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 FOXD4L3Q6VB84 417 aaPredicted RBP4.26□□□□□ -1.73
HMG20A-203ENST00000558176 TBC1D9Q6ZT07 1266 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 MCM10Q7L590 875 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 SLC51AQ86UW1 340 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 NLRP8Q86W28 1048 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 FCHSD1Q86WN1 690 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 CCER1Q8TC90 406 aaPredicted RBP4.26□□□□□ -1.73
HMG20A-203ENST00000558176 C7orf43Q8WVR3 580 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 PLVAPQ9BX97 442 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 KLF15Q9UIH9 416 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 HACL1Q9UJ83 578 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 NIP7Q9Y221 180 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMG20A-203ENST00000558176 ZNF652Q9Y2D9 606 aa4.26□□□□□ -1.73
HMG20A-203ENST00000558176 USP16Q9Y5T5 823 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms